RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 ITM2CQ9NQX7 267 aa22.47■■□□□ 1.19
SMARCB1-201ENST00000263121 CD274Q9NZQ7 290 aa22.47■■□□□ 1.19
SMARCB1-201ENST00000263121 USP36Q9P275 1121 aaKnown RBP22.47■■□□□ 1.19
SMARCB1-201ENST00000263121 GPR34Q9UPC5 381 aa22.47■■□□□ 1.19
SMARCB1-201ENST00000263121 SLC5A10A0PJK1 596 aa22.46■■□□□ 1.19
SMARCB1-201ENST00000263121 NCF1BA6NI72 391 aaPredicted RBP22.46■■□□□ 1.19
SMARCB1-201ENST00000263121 NCF1CA8MVU1 366 aaPredicted RBP22.46■■□□□ 1.19
SMARCB1-201ENST00000263121 RAD51BO15315 384 aa22.46■■□□□ 1.19
SMARCB1-201ENST00000263121 SUPT7LO94864 414 aa22.46■■□□□ 1.19
SMARCB1-201ENST00000263121 NCF1P14598 390 aaPredicted RBP22.46■■□□□ 1.19
SMARCB1-201ENST00000263121 IFT88Q13099 833 aa22.46■■□□□ 1.19
SMARCB1-201ENST00000263121 SETDB1Q15047 1291 aa22.46■■□□□ 1.19
SMARCB1-201ENST00000263121 PHKG1Q16816 387 aa22.46■■□□□ 1.19
SMARCB1-201ENST00000263121 RPS27LQ71UM5 84 aaKnown RBP22.46■■□□□ 1.19
SMARCB1-201ENST00000263121 ZNF547Q8IVP9 402 aa22.46■■□□□ 1.19
SMARCB1-201ENST00000263121 PDPRQ8NCN5 879 aa22.46■■□□□ 1.19
SMARCB1-201ENST00000263121 GLMNQ92990 594 aa22.46■■□□□ 1.19
SMARCB1-201ENST00000263121 LGR4Q9BXB1 951 aa22.46■■□□□ 1.19
SMARCB1-201ENST00000263121 RDH14Q9HBH5 336 aa22.46■■□□□ 1.19
SMARCB1-201ENST00000263121 UTP6Q9NYH9 597 aaKnown RBP22.46■■□□□ 1.19
SMARCB1-201ENST00000263121 GULP1Q9UBP9 304 aa22.46■■□□□ 1.19
SMARCB1-201ENST00000263121 EBF1Q9UH73 591 aa22.46■■□□□ 1.19
SMARCB1-201ENST00000263121 FBXL21Q9UKT6 434 aa22.46■■□□□ 1.19
SMARCB1-201ENST00000263121 KANSL1LA0AUZ9 987 aa22.46■■□□□ 1.19
SMARCB1-201ENST00000263121 LRRC14BA6NHZ5 514 aa22.46■■□□□ 1.19
SMARCB1-201ENST00000263121 ZNF195O14628 629 aa22.46■■□□□ 1.19
SMARCB1-201ENST00000263121 FFAR2O15552 330 aa22.46■■□□□ 1.19
SMARCB1-201ENST00000263121 SNX2O60749 519 aa22.46■■□□□ 1.19
SMARCB1-201ENST00000263121 RPS17P08708 135 aaKnown RBP22.46■■□□□ 1.19
SMARCB1-201ENST00000263121 GSTM1P09488 218 aa22.46■■□□□ 1.19
SMARCB1-201ENST00000263121 EEF1DP29692 281 aaKnown RBP22.46■■□□□ 1.19
SMARCB1-201ENST00000263121 ACSL1P33121 698 aa22.46■■□□□ 1.19
SMARCB1-201ENST00000263121 AQP5P55064 265 aa22.46■■□□□ 1.19
SMARCB1-201ENST00000263121 GSTM4Q03013 218 aa22.46■■□□□ 1.19
SMARCB1-201ENST00000263121 GAS6Q14393 721 aa22.46■■□□□ 1.19
SMARCB1-201ENST00000263121 MAVSQ7Z434 540 aa22.46■■□□□ 1.19
SMARCB1-201ENST00000263121 TRIM69Q86WT6 500 aa22.46■■□□□ 1.19
SMARCB1-201ENST00000263121 TRAPPC5Q8IUR0 188 aa22.46■■□□□ 1.19
SMARCB1-201ENST00000263121 RASGRP3Q8IV61 690 aa22.46■■□□□ 1.19
SMARCB1-201ENST00000263121 WDR26Q9H7D7 661 aa22.46■■□□□ 1.19
SMARCB1-201ENST00000263121 ZDHHC2Q9UIJ5 367 aa22.46■■□□□ 1.19
SMARCB1-201ENST00000263121 TMEM98Q9Y2Y6 226 aa22.46■■□□□ 1.19
SMARCB1-201ENST00000263121 NUMA1Q14980 2115 aa22.45■■□□□ 1.18
SMARCB1-201ENST00000263121 C10orf142B7Z368 130 aa22.45■■□□□ 1.18
SMARCB1-201ENST00000263121 CHUKO15111 745 aa22.45■■□□□ 1.18
SMARCB1-201ENST00000263121 IGLV3-19P01714 112 aa22.45■■□□□ 1.18
SMARCB1-201ENST00000263121 C8GP07360 202 aa22.45■■□□□ 1.18
SMARCB1-201ENST00000263121 IGFALSP35858 605 aa22.45■■□□□ 1.18
SMARCB1-201ENST00000263121 RPL14P50914 215 aaKnown RBP22.45■■□□□ 1.18
SMARCB1-201ENST00000263121 HK2P52789 917 aa22.45■■□□□ 1.18
SMARCB1-201ENST00000263121 NAA20P61599 178 aa22.45■■□□□ 1.18
SMARCB1-201ENST00000263121 DMTNQ08495 405 aa22.45■■□□□ 1.18
SMARCB1-201ENST00000263121 UBXN2BQ14CS0 331 aa22.45■■□□□ 1.18
SMARCB1-201ENST00000263121 OR2T34Q8NGX1 318 aa22.45■■□□□ 1.18
SMARCB1-201ENST00000263121 ASB11Q8WXH4 323 aa22.45■■□□□ 1.18
SMARCB1-201ENST00000263121 BTBD1Q9H0C5 482 aa22.45■■□□□ 1.18
SMARCB1-201ENST00000263121 EML4Q9HC35 981 aaKnown RBP22.45■■□□□ 1.18
SMARCB1-201ENST00000263121 C2orf42Q9NWW7 574 aa22.45■■□□□ 1.18
SMARCB1-201ENST00000263121 DOCK9Q9BZ29 2069 aa22.45■■□□□ 1.18
SMARCB1-201ENST00000263121 CCT8L1PA6NM43 557 aa22.44■■□□□ 1.18
SMARCB1-201ENST00000263121 MAT2AP31153 395 aaKnown RBP22.44■■□□□ 1.18
SMARCB1-201ENST00000263121 AGTR2P50052 363 aa22.44■■□□□ 1.18
SMARCB1-201ENST00000263121 SP140Q13342 867 aa22.44■■□□□ 1.18
SMARCB1-201ENST00000263121 SYTL3Q4VX76 610 aa22.44■■□□□ 1.18
SMARCB1-201ENST00000263121 XKR5Q6UX68 686 aa22.44■■□□□ 1.18
SMARCB1-201ENST00000263121 TRPM8Q7Z2W7 1104 aa22.44■■□□□ 1.18
SMARCB1-201ENST00000263121 TMEM159Q96B96 161 aa22.44■■□□□ 1.18
SMARCB1-201ENST00000263121 SLC12A9Q9BXP2 914 aa22.44■■□□□ 1.18
SMARCB1-201ENST00000263121 SHCBP1LQ9BZQ2 653 aa22.44■■□□□ 1.18
SMARCB1-201ENST00000263121 FOXQ1Q9C009 403 aa22.44■■□□□ 1.18
SMARCB1-201ENST00000263121 SGK2Q9HBY8 427 aa22.44■■□□□ 1.18
SMARCB1-201ENST00000263121 ABCF3Q9NUQ8 709 aa22.44■■□□□ 1.18
SMARCB1-201ENST00000263121 OR1A2Q9Y585 309 aa22.44■■□□□ 1.18
SMARCB1-201ENST00000263121 C17orf113A0A1B0GUU1 675 aa22.43■■□□□ 1.18
SMARCB1-201ENST00000263121 GFYI3L273 518 aa22.43■■□□□ 1.18
SMARCB1-201ENST00000263121 SLC16A5O15375 505 aa22.43■■□□□ 1.18
SMARCB1-201ENST00000263121 S100BP04271 92 aaPredicted RBP22.43■■□□□ 1.18
SMARCB1-201ENST00000263121 ENO2P09104 434 aaPredicted RBP22.43■■□□□ 1.18
SMARCB1-201ENST00000263121 VCLP18206 1134 aa22.43■■□□□ 1.18
SMARCB1-201ENST00000263121 PBLDP30039 288 aaPredicted RBP22.43■■□□□ 1.18
SMARCB1-201ENST00000263121 ANKS6Q68DC2 871 aa22.43■■□□□ 1.18
SMARCB1-201ENST00000263121 C11orf96Q7Z7L8 435 aa22.43■■□□□ 1.18
SMARCB1-201ENST00000263121 SLC22A15Q8IZD6 547 aa22.43■■□□□ 1.18
SMARCB1-201ENST00000263121 SIX5Q8N196 739 aa22.43■■□□□ 1.18
SMARCB1-201ENST00000263121 LILRA3Q8N6C8 439 aaPredicted RBP22.43■■□□□ 1.18
SMARCB1-201ENST00000263121 ZNF483Q8TF39 744 aaPredicted RBP22.43■■□□□ 1.18
SMARCB1-201ENST00000263121 ASB2Q96Q27 587 aa22.43■■□□□ 1.18
SMARCB1-201ENST00000263121 NELL2Q99435 816 aa22.43■■□□□ 1.18
SMARCB1-201ENST00000263121 STN1Q9H668 368 aaKnown RBP22.43■■□□□ 1.18
SMARCB1-201ENST00000263121 COG4Q9H9E3 785 aa22.43■■□□□ 1.18
SMARCB1-201ENST00000263121 PHPT1Q9NRX4 125 aaPredicted RBP22.43■■□□□ 1.18
SMARCB1-201ENST00000263121 DNAJC28Q9NX36 388 aa22.43■■□□□ 1.18
SMARCB1-201ENST00000263121 FAM8A1Q9UBU6 413 aa22.43■■□□□ 1.18
SMARCB1-201ENST00000263121 PTBP2Q9UKA9 531 aaKnown RBP22.43■■□□□ 1.18
SMARCB1-201ENST00000263121 PCYT1BQ9Y5K3 369 aaPredicted RBP22.43■■□□□ 1.18
SMARCB1-201ENST00000263121 LRRC72A6NJI9 287 aa22.42■■□□□ 1.18
SMARCB1-201ENST00000263121 FAM170BA6NMN3 283 aa22.42■■□□□ 1.18
SMARCB1-201ENST00000263121 GPR89AB7ZAQ6 455 aa22.42■■□□□ 1.18
SMARCB1-201ENST00000263121 MATN2O00339 956 aa22.42■■□□□ 1.18
SMARCB1-201ENST00000263121 UBFD1O14562 309 aaKnown RBP22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms