RNA–Protein interactions for RNA: ENST00000262901.4

SIM1-201, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 3,999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-201ENST00000262901 MAPKAPK3Q16644 382 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 GPRIN1Q7Z2K8 1008 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 DNAJB7Q7Z6W7 309 aaPredicted RBP9.44□□□□□ -0.9
SIM1-201ENST00000262901 EID3Q8N140 333 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 HEXDCQ8WVB3 486 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 SELENOMQ8WWX9 145 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 RORBQ92753 470 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 DGCR14Q96DF8 476 aaKnown RBP9.44□□□□□ -0.9
SIM1-201ENST00000262901 PTCD3Q96EY7 689 aaKnown RBP9.44□□□□□ -0.9
SIM1-201ENST00000262901 METTL2AQ96IZ6 378 aaKnown RBP9.44□□□□□ -0.9
SIM1-201ENST00000262901 EPB41L4BQ9H329 900 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 IGFLR1Q9H665 355 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 PCDH10Q9P2E7 1040 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 COQ6Q9Y2Z9 468 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 OR51F1A6NGY5 319 aa9.43□□□□□ -0.9
SIM1-201ENST00000262901 GRXCR1A8MXD5 290 aa9.43□□□□□ -0.9
SIM1-201ENST00000262901 TRAFD1O14545 582 aaPredicted RBP9.43□□□□□ -0.9
SIM1-201ENST00000262901 CD3EAPO15446 510 aaKnown RBP9.43□□□□□ -0.9
SIM1-201ENST00000262901 LRATO95237 230 aa9.43□□□□□ -0.9
SIM1-201ENST00000262901 EPB42P16452 691 aa9.43□□□□□ -0.9
SIM1-201ENST00000262901 XRCC1P18887 633 aaPredicted RBP9.43□□□□□ -0.9
SIM1-201ENST00000262901 CCR10P46092 362 aa9.43□□□□□ -0.9
SIM1-201ENST00000262901 DPYSL2Q16555 572 aa9.43□□□□□ -0.9
SIM1-201ENST00000262901 AP5B1Q2VPB7 878 aa9.43□□□□□ -0.9
SIM1-201ENST00000262901 NCBP2-AS2Q69YL0 99 aa9.43□□□□□ -0.9
SIM1-201ENST00000262901 RETSATQ6NUM9 610 aa9.43□□□□□ -0.9
SIM1-201ENST00000262901 OFCC1Q8IZS5 231 aa9.43□□□□□ -0.9
SIM1-201ENST00000262901 TTLQ8NG68 377 aa9.43□□□□□ -0.9
SIM1-201ENST00000262901 LRTOMTQ8WZ04 291 aa9.43□□□□□ -0.9
SIM1-201ENST00000262901 PLK2Q9NYY3 685 aa9.43□□□□□ -0.9
SIM1-201ENST00000262901 A0A088AWK7 358 aa9.43□□□□□ -0.9
SIM1-201ENST00000262901 CBFA2T3O75081 653 aa9.43□□□□□ -0.9
SIM1-201ENST00000262901 HDCP19113 662 aa9.43□□□□□ -0.9
SIM1-201ENST00000262901 MTHFRP42898 656 aa9.43□□□□□ -0.9
SIM1-201ENST00000262901 IDH2P48735 452 aaKnown RBP9.43□□□□□ -0.9
SIM1-201ENST00000262901 PITX1P78337 314 aaPredicted RBP9.43□□□□□ -0.9
SIM1-201ENST00000262901 ZNF423Q2M1K9 1284 aa9.43□□□□□ -0.9
SIM1-201ENST00000262901 CLVS2Q5SYC1 327 aa9.43□□□□□ -0.9
SIM1-201ENST00000262901 SHEQ5VZ18 495 aa9.43□□□□□ -0.9
SIM1-201ENST00000262901 CNSTQ6PJW8 725 aa9.43□□□□□ -0.9
SIM1-201ENST00000262901 PAOXQ6QHF9 649 aa9.43□□□□□ -0.9
SIM1-201ENST00000262901 TMEM26Q6ZUK4 368 aa9.43□□□□□ -0.9
SIM1-201ENST00000262901 DET1Q7L5Y6 550 aa9.43□□□□□ -0.9
SIM1-201ENST00000262901 Q8N9G6 341 aaPredicted RBP9.43□□□□□ -0.9
SIM1-201ENST00000262901 OR4K2Q8NGD2 314 aa9.43□□□□□ -0.9
SIM1-201ENST00000262901 PANX3Q96QZ0 392 aa9.43□□□□□ -0.9
SIM1-201ENST00000262901 C6orf62Q9GZU0 229 aaPredicted RBP9.43□□□□□ -0.9
SIM1-201ENST00000262901 ZBP1Q9H171 429 aa9.43□□□□□ -0.9
SIM1-201ENST00000262901 NKX2-4Q9H2Z4 354 aa9.43□□□□□ -0.9
SIM1-201ENST00000262901 HEMK1Q9Y5R4 338 aaPredicted RBP9.43□□□□□ -0.9
SIM1-201ENST00000262901 GRXCR2A6NFK2 248 aa9.43□□□□□ -0.9
SIM1-201ENST00000262901 CCL16O15467 120 aa9.43□□□□□ -0.9
SIM1-201ENST00000262901 ADAM12O43184 909 aa9.43□□□□□ -0.9
SIM1-201ENST00000262901 FUCA1P04066 466 aa9.43□□□□□ -0.9
SIM1-201ENST00000262901 DLDP09622 509 aaKnown RBP9.43□□□□□ -0.9
SIM1-201ENST00000262901 GRIA2P42262 883 aa9.43□□□□□ -0.9
SIM1-201ENST00000262901 CSTF3Q12996 717 aaKnown RBP9.43□□□□□ -0.9
SIM1-201ENST00000262901 SPIDRQ14159 915 aa9.43□□□□□ -0.9
SIM1-201ENST00000262901 C9orf50Q5SZB4 431 aa9.43□□□□□ -0.9
SIM1-201ENST00000262901 TCEAL8Q8IYN2 117 aa9.43□□□□□ -0.9
SIM1-201ENST00000262901 TTC9BQ8N6N2 239 aa9.43□□□□□ -0.9
SIM1-201ENST00000262901 PQLC3Q8N755 202 aa9.43□□□□□ -0.9
SIM1-201ENST00000262901 LILRB4Q8NHJ6 448 aa9.43□□□□□ -0.9
SIM1-201ENST00000262901 RDH11Q8TC12 318 aa9.43□□□□□ -0.9
SIM1-201ENST00000262901 LINGO1Q96FE5 620 aa9.43□□□□□ -0.9
SIM1-201ENST00000262901 RBM18Q96H35 190 aaKnown RBP9.43□□□□□ -0.9
SIM1-201ENST00000262901 SIGLEC10Q96LC7 697 aa9.43□□□□□ -0.9
SIM1-201ENST00000262901 DNAJC28Q9NX36 388 aa9.43□□□□□ -0.9
SIM1-201ENST00000262901 LEF1Q9UJU2 399 aaPredicted RBP9.43□□□□□ -0.9
SIM1-201ENST00000262901 TRAV19A0A0A6YYK7 116 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 STMND1H3BQB6 276 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 FAM20BO75063 409 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 OCM2P0CE71 109 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 OCMP0CE72 109 aaPredicted RBP9.42□□□□□ -0.9
SIM1-201ENST00000262901 POM121L1PQ3SYA9 428 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 PM20D1Q6GTS8 502 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 PGAM4Q8N0Y7 254 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 SCML4Q8N228 414 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 CBR4Q8N4T8 237 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 OR4L1Q8NH43 312 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 SLC7A6OSQ96CW6 309 aaPredicted RBP9.42□□□□□ -0.9
SIM1-201ENST00000262901 TSGA13Q96PP4 275 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 SLC2A13Q96QE2 648 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 NPY6RQ99463 290 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 CAPN10Q9HC96 672 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 RCOR3Q9P2K3 495 aaPredicted RBP9.42□□□□□ -0.9
SIM1-201ENST00000262901 FETUBQ9UGM5 382 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 KLHL3Q9UH77 587 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 RSL24D1Q9UHA3 163 aaKnown RBP9.42□□□□□ -0.9
SIM1-201ENST00000262901 POU2F3Q9UKI9 436 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 PCOLCE2Q9UKZ9 415 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 FZD10Q9ULW2 581 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 EDARQ9UNE0 448 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 NUMA1Q14980 2115 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 LOC100506127A0A0U1RQW1 187 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 IRAK2O43187 625 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 DNAJA2O60884 412 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 KRT75O95678 551 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 NCK1P16333 377 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 RFX3P48380 749 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms