RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 CCNT2O60583 730 aaKnown RBP13.36□□□□□ -0.27
VMP1-201ENST00000262291 DDX6P26196 483 aaKnown RBP eCLIP13.36□□□□□ -0.27
VMP1-201ENST00000262291 AKT1P31749 480 aa13.36□□□□□ -0.27
VMP1-201ENST00000262291 HTR6P50406 440 aa13.36□□□□□ -0.27
VMP1-201ENST00000262291 GALNT1Q10472 559 aaPredicted RBP13.36□□□□□ -0.27
VMP1-201ENST00000262291 RALGDSQ12967 914 aa13.36□□□□□ -0.27
VMP1-201ENST00000262291 CEACAM7Q14002 265 aa13.36□□□□□ -0.27
VMP1-201ENST00000262291 LETMD1Q6P1Q0 360 aa13.36□□□□□ -0.27
VMP1-201ENST00000262291 ZBTB2Q8N680 514 aa13.36□□□□□ -0.27
VMP1-201ENST00000262291 GDPD5Q8WTR4 605 aa13.36□□□□□ -0.27
VMP1-201ENST00000262291 PCDH12Q9NPG4 1184 aa13.36□□□□□ -0.27
VMP1-201ENST00000262291 PCDHB1Q9Y5F3 818 aa13.36□□□□□ -0.27
VMP1-201ENST00000262291 TXNDC9O14530 226 aa13.36□□□□□ -0.27
VMP1-201ENST00000262291 ERVPABLB-1P60509 514 aa13.36□□□□□ -0.27
VMP1-201ENST00000262291 HSPA14Q0VDF9 509 aa13.36□□□□□ -0.27
VMP1-201ENST00000262291 CACUL1Q86Y37 369 aa13.36□□□□□ -0.27
VMP1-201ENST00000262291 MYO1HQ8N1T3 1032 aa13.36□□□□□ -0.27
VMP1-201ENST00000262291 VN1R2Q8NFZ6 395 aa13.36□□□□□ -0.27
VMP1-201ENST00000262291 OR2T11Q8NH01 316 aa13.36□□□□□ -0.27
VMP1-201ENST00000262291 FRS2Q8WU20 508 aa13.36□□□□□ -0.27
VMP1-201ENST00000262291 ATP6V1E2Q96A05 226 aa13.36□□□□□ -0.27
VMP1-201ENST00000262291 NDE1Q9NXR1 346 aa13.36□□□□□ -0.27
VMP1-201ENST00000262291 TBC1D14Q9P2M4 693 aa13.36□□□□□ -0.27
VMP1-201ENST00000262291 GMEB1Q9Y692 573 aa13.36□□□□□ -0.27
VMP1-201ENST00000262291 TRBV5-4A0A0C4DH59 114 aa13.35□□□□□ -0.27
VMP1-201ENST00000262291 WASH3PC4AMC7 463 aa13.35□□□□□ -0.27
VMP1-201ENST00000262291 FFAR3O14843 346 aa13.35□□□□□ -0.27
VMP1-201ENST00000262291 GPR42O15529 346 aa13.35□□□□□ -0.27
VMP1-201ENST00000262291 FFAR2O15552 330 aa13.35□□□□□ -0.27
VMP1-201ENST00000262291 PABPC4LP0CB38 370 aaKnown RBP13.35□□□□□ -0.27
VMP1-201ENST00000262291 ADH5P11766 374 aa13.35□□□□□ -0.27
VMP1-201ENST00000262291 SOX11P35716 441 aa13.35□□□□□ -0.27
VMP1-201ENST00000262291 SPINT3P49223 89 aa13.35□□□□□ -0.27
VMP1-201ENST00000262291 DGKGP49619 791 aa13.35□□□□□ -0.27
VMP1-201ENST00000262291 BOP1Q14137 746 aaKnown RBP13.35□□□□□ -0.27
VMP1-201ENST00000262291 ARHGEF7Q14155 803 aa13.35□□□□□ -0.27
VMP1-201ENST00000262291 SQLEQ14534 574 aa13.35□□□□□ -0.27
VMP1-201ENST00000262291 FAM78AQ5JUQ0 283 aa13.35□□□□□ -0.27
VMP1-201ENST00000262291 REP15Q6BDI9 236 aa13.35□□□□□ -0.27
VMP1-201ENST00000262291 BNC2Q6ZN30 1099 aaPredicted RBP13.35□□□□□ -0.27
VMP1-201ENST00000262291 RNF111Q6ZNA4 994 aa13.35□□□□□ -0.27
VMP1-201ENST00000262291 GET4Q7L5D6 327 aaPredicted RBP13.35□□□□□ -0.27
VMP1-201ENST00000262291 VRK3Q8IV63 474 aa13.35□□□□□ -0.27
VMP1-201ENST00000262291 FUNDC1Q8IVP5 155 aa13.35□□□□□ -0.27
VMP1-201ENST00000262291 PHOSPHO2Q8TCD6 241 aa13.35□□□□□ -0.27
VMP1-201ENST00000262291 ISG20Q96AZ6 181 aaKnown RBP13.35□□□□□ -0.27
VMP1-201ENST00000262291 COPS8Q99627 209 aa13.35□□□□□ -0.27
VMP1-201ENST00000262291 HEPHQ9BQS7 1158 aa13.35□□□□□ -0.27
VMP1-201ENST00000262291 WRAP53Q9BUR4 548 aaKnown RBP13.35□□□□□ -0.27
VMP1-201ENST00000262291 EFCAB1Q9HAE3 211 aa13.35□□□□□ -0.27
VMP1-201ENST00000262291 PRRT4C9JH25 899 aa13.35□□□□□ -0.27
VMP1-201ENST00000262291 TULP3O75386 442 aa13.35□□□□□ -0.27
VMP1-201ENST00000262291 CCR7P32248 378 aa13.35□□□□□ -0.27
VMP1-201ENST00000262291 MTTPP55157 894 aa13.35□□□□□ -0.27
VMP1-201ENST00000262291 ADARP55265 1226 aaKnown RBP13.35□□□□□ -0.27
VMP1-201ENST00000262291 YBX1P67809 324 aaKnown RBP13.35□□□□□ -0.27
VMP1-201ENST00000262291 MS4A2Q01362 244 aa13.35□□□□□ -0.27
VMP1-201ENST00000262291 GRIN2CQ14957 1233 aa13.35□□□□□ -0.27
VMP1-201ENST00000262291 SHHQ15465 462 aa13.35□□□□□ -0.27
VMP1-201ENST00000262291 VPS26BQ4G0F5 336 aa13.35□□□□□ -0.27
VMP1-201ENST00000262291 SGO1Q5FBB7 561 aa13.35□□□□□ -0.27
VMP1-201ENST00000262291 RARS2Q5T160 578 aaKnown RBP13.35□□□□□ -0.27
VMP1-201ENST00000262291 GPRC6AQ5T6X5 926 aa13.35□□□□□ -0.27
VMP1-201ENST00000262291 GPRIN3Q6ZVF9 776 aa13.35□□□□□ -0.27
VMP1-201ENST00000262291 GOLGA7Q7Z5G4 137 aa13.35□□□□□ -0.27
VMP1-201ENST00000262291 METTL3Q86U44 580 aaKnown RBP13.35□□□□□ -0.27
VMP1-201ENST00000262291 AHI1Q8N157 1196 aa13.35□□□□□ -0.27
VMP1-201ENST00000262291 FOXJ1Q92949 421 aa13.35□□□□□ -0.27
VMP1-201ENST00000262291 ANGPTL2Q9UKU9 493 aa13.35□□□□□ -0.27
VMP1-201ENST00000262291 SARDHQ9UL12 918 aa13.35□□□□□ -0.27
VMP1-201ENST00000262291 COQ6Q9Y2Z9 468 aa13.35□□□□□ -0.27
VMP1-201ENST00000262291 OR2AG2A6NM03 316 aa13.34□□□□□ -0.27
VMP1-201ENST00000262291 E7ENX8 843 aa13.34□□□□□ -0.27
VMP1-201ENST00000262291 KPNA3O00505 521 aaPredicted RBP13.34□□□□□ -0.27
VMP1-201ENST00000262291 TAPBPO15533 448 aa13.34□□□□□ -0.27
VMP1-201ENST00000262291 FGF19O95750 216 aa13.34□□□□□ -0.27
VMP1-201ENST00000262291 HNRNPA1P09651 372 aaKnown RBP eCLIP13.34□□□□□ -0.27
VMP1-201ENST00000262291 TIMP2P16035 220 aa13.34□□□□□ -0.27
VMP1-201ENST00000262291 LPCAT4Q643R3 524 aa13.34□□□□□ -0.27
VMP1-201ENST00000262291 C16orf89Q6UX73 402 aa13.34□□□□□ -0.27
VMP1-201ENST00000262291 TEX37Q96LM6 180 aa13.34□□□□□ -0.27
VMP1-201ENST00000262291 MCCC1Q96RQ3 725 aaPredicted RBP13.34□□□□□ -0.27
VMP1-201ENST00000262291 MRPL1Q9BYD6 325 aaKnown RBP13.34□□□□□ -0.27
VMP1-201ENST00000262291 CPEB1Q9BZB8 566 aaKnown RBP13.34□□□□□ -0.27
VMP1-201ENST00000262291 STX16O14662 325 aa13.34□□□□□ -0.27
VMP1-201ENST00000262291 GIPC1O14908 333 aa13.34□□□□□ -0.27
VMP1-201ENST00000262291 KLK8O60259 260 aa13.34□□□□□ -0.27
VMP1-201ENST00000262291 S100BP04271 92 aaPredicted RBP13.34□□□□□ -0.27
VMP1-201ENST00000262291 CAPN1P07384 714 aa13.34□□□□□ -0.27
VMP1-201ENST00000262291 FGF4P08620 206 aa13.34□□□□□ -0.27
VMP1-201ENST00000262291 PFKLP17858 780 aa13.34□□□□□ -0.27
VMP1-201ENST00000262291 XPAP23025 273 aaPredicted RBP13.34□□□□□ -0.27
VMP1-201ENST00000262291 AAK1Q2M2I8 961 aa13.34□□□□□ -0.27
VMP1-201ENST00000262291 RBM44Q6ZP01 1051 aaKnown RBP13.34□□□□□ -0.27
VMP1-201ENST00000262291 PHYKPLQ8IUZ5 450 aa13.34□□□□□ -0.27
VMP1-201ENST00000262291 OR56A4Q8NGH8 313 aa13.34□□□□□ -0.27
VMP1-201ENST00000262291 HSPBAP1Q96EW2 488 aa13.34□□□□□ -0.27
VMP1-201ENST00000262291 RIOK2Q9BVS4 552 aaKnown RBP13.34□□□□□ -0.27
VMP1-201ENST00000262291 CEP44Q9C0F1 390 aa13.34□□□□□ -0.27
VMP1-201ENST00000262291 PCDHAC1Q9H158 963 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms