RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 PEX16Q9Y5Y5 336 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 MYH14Q7Z406 1995 aaKnown RBP4.26□□□□□ -1.73
VPS13C-202ENST00000261517 SOWAHBA6NEL2 793 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 UPK3BL1B0FP48 263 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 C9J4A7 227 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 UPK3BL2E5RIL1 263 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 G3V2T6 193 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 SOD2P04179 222 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 IL12RB1P42701 662 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 BEX3Q00994 111 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 RASGEF1BQ0VAM2 473 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 NFE2L1Q14494 772 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 ZNF618Q5T7W0 954 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 EMC10Q5UCC4 262 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 SLC8B1Q6J4K2 584 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 DCUN1D3Q8IWE4 304 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 KREMEN2Q8NCW0 462 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 KIAA1191Q96A73 305 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 KIFC1Q9BW19 673 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 PAK6Q9NQU5 681 aaPredicted RBP4.26□□□□□ -1.73
VPS13C-202ENST00000261517 SERINC1Q9NRX5 453 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 BTBD3Q9Y2F9 522 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 KMOO15229 486 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 APOC1P02654 83 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 PROCP04070 461 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 DGKGP49619 791 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 ACADVLP49748 655 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 FGD3Q5JSP0 725 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 ATG14Q6ZNE5 492 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 SLC41A1Q8IVJ1 513 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 PCED1BQ96HM7 432 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 BMFQ96LC9 184 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 LRRC3Q9BY71 257 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 POLD4Q9HCU8 107 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 B3GAT2Q9NPZ5 323 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 XPR1Q9UBH6 696 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 IL36AQ9UHA7 158 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 SAMHD1Q9Y3Z3 626 aaKnown RBP4.26□□□□□ -1.73
VPS13C-202ENST00000261517 TNFP01375 233 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 ZCCHC18P0CG32 403 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 SSR2P43308 183 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 SP2Q02086 613 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 KIAA1161Q6NSJ0 714 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 ZNF461Q8TAF7 563 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 BORCS5Q969J3 196 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 PGAP3Q96FM1 320 aaPredicted RBP4.26□□□□□ -1.73
VPS13C-202ENST00000261517 HSPE1-MOB4S4R3N1 261 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 A0A1W2PQ72 361 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 HAT1O14929 419 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 YKT6O15498 198 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 C2P06681 752 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 AGXTP21549 392 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 CRISP3P54108 245 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 ELF3P78545 371 aaPredicted RBP4.25□□□□□ -1.73
VPS13C-202ENST00000261517 HSPA14Q0VDF9 509 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 POU4F2Q12837 409 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 FADDQ13158 208 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 SNTA1Q13424 505 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 CNPY1Q3B7I2 92 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 NUS1Q96E22 293 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 FERD3LQ96RJ6 166 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 TMEM209Q96SK2 561 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 SLC32A1Q9H598 525 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 FAM159BA6NKW6 160 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 RGS5O15539 181 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 FABP3P05413 133 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 PBLDP30039 288 aaPredicted RBP4.25□□□□□ -1.73
VPS13C-202ENST00000261517 UGT1A3P35503 534 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 PDX1P52945 283 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 TRAF7Q6Q0C0 670 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 SLC9B2Q86UD5 537 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 KCNV2Q8TDN2 545 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 UTP15Q8TED0 518 aaKnown RBP4.25□□□□□ -1.73
VPS13C-202ENST00000261517 RAB2BQ8WUD1 216 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 KCNJ9Q92806 393 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 SYT17Q9BSW7 474 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 HDHD5Q9BXW7 423 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 TLR9Q9NR96 1032 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 SPO11Q9Y5K1 396 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 SCGNO76038 276 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 PRAMEF1O95521 474 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 MAPK12P53778 367 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 MTAPQ13126 283 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 TARBP2Q15633 366 aaKnown RBP4.25□□□□□ -1.73
VPS13C-202ENST00000261517 C15orf59Q2T9L4 293 aaPredicted RBP4.25□□□□□ -1.73
VPS13C-202ENST00000261517 FUT11Q495W5 492 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 TMEM139Q8IV31 216 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 BANPQ8N9N5 519 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 ADAMTS15Q8TE58 950 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 SGF29Q96ES7 293 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 TUBA1CQ9BQE3 449 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 CENPOQ9BU64 300 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 TBC1D10AQ9BXI6 508 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 NOL11Q9H8H0 719 aaKnown RBP4.25□□□□□ -1.73
VPS13C-202ENST00000261517 LIPT1Q9Y234 373 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 KIAA1217Q5T5P2 1943 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 NCF1BA6NI72 391 aaPredicted RBP4.25□□□□□ -1.73
VPS13C-202ENST00000261517 NCF1CA8MVU1 366 aaPredicted RBP4.25□□□□□ -1.73
VPS13C-202ENST00000261517 BHMG1C9JSJ3 638 aaPredicted RBP4.25□□□□□ -1.73
VPS13C-202ENST00000261517 K7EPI3 171 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms