RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 ZDHHC13Q8IUH4 622 aa16.69■□□□□ 0.26
SORT1-201ENST00000256637 CENPIQ92674 756 aaPredicted RBP16.69■□□□□ 0.26
SORT1-201ENST00000256637 TBX5Q99593 518 aa16.69■□□□□ 0.26
SORT1-201ENST00000256637 GIN1Q9NXP7 522 aa16.69■□□□□ 0.26
SORT1-201ENST00000256637 PIAS3Q9Y6X2 628 aa16.69■□□□□ 0.26
SORT1-201ENST00000256637 PAX3P23760 479 aa16.69■□□□□ 0.26
SORT1-201ENST00000256637 ARMCX4Q5H9R4 360 aa16.69■□□□□ 0.26
SORT1-201ENST00000256637 CLEC20AQ6ZU45 233 aa16.69■□□□□ 0.26
SORT1-201ENST00000256637 HFE2Q6ZVN8 426 aa16.69■□□□□ 0.26
SORT1-201ENST00000256637 ALYREFQ86V81 257 aaKnown RBP16.69■□□□□ 0.26
SORT1-201ENST00000256637 OR2AJ1Q8NGZ0 328 aa16.69■□□□□ 0.26
SORT1-201ENST00000256637 WFIKKN2Q8TEU8 576 aa16.69■□□□□ 0.26
SORT1-201ENST00000256637 PDCD10Q9BUL8 212 aa16.69■□□□□ 0.26
SORT1-201ENST00000256637 DHX33Q9H6R0 707 aaKnown RBP16.69■□□□□ 0.26
SORT1-201ENST00000256637 IPPKQ9H8X2 491 aa16.69■□□□□ 0.26
SORT1-201ENST00000256637 DLGAP2Q9P1A6 1054 aa16.69■□□□□ 0.26
SORT1-201ENST00000256637 CBX6O95503 412 aa16.69■□□□□ 0.26
SORT1-201ENST00000256637 LPCAT2Q7L5N7 544 aa16.69■□□□□ 0.26
SORT1-201ENST00000256637 LYSMD3Q7Z3D4 306 aa16.69■□□□□ 0.26
SORT1-201ENST00000256637 HLA-CQ95604 372 aa16.69■□□□□ 0.26
SORT1-201ENST00000256637 HIST1H2AAQ96QV6 131 aa16.69■□□□□ 0.26
SORT1-201ENST00000256637 EBNA1BP2Q99848 306 aaKnown RBP16.69■□□□□ 0.26
SORT1-201ENST00000256637 HCFC1R1Q9NWW0 138 aa16.69■□□□□ 0.26
SORT1-201ENST00000256637 SLC17A6Q9P2U8 582 aa16.69■□□□□ 0.26
SORT1-201ENST00000256637 TMCO1Q9UM00 188 aa16.69■□□□□ 0.26
SORT1-201ENST00000256637 EPCAMP16422 314 aa16.68■□□□□ 0.26
SORT1-201ENST00000256637 ALOX12P18054 663 aa16.68■□□□□ 0.26
SORT1-201ENST00000256637 MAPK14Q16539 360 aa16.68■□□□□ 0.26
SORT1-201ENST00000256637 MROH1Q8NDA8 1641 aa16.68■□□□□ 0.26
SORT1-201ENST00000256637 MAGEA9P43362 315 aa16.68■□□□□ 0.26
SORT1-201ENST00000256637 ASPAP45381 313 aa16.68■□□□□ 0.26
SORT1-201ENST00000256637 SLC22A8Q8TCC7 542 aa16.68■□□□□ 0.26
SORT1-201ENST00000256637 LRTM1Q9HBL6 345 aa16.68■□□□□ 0.26
SORT1-201ENST00000256637 TLR6Q9Y2C9 796 aa16.68■□□□□ 0.26
SORT1-201ENST00000256637 GLOD5A6NK44 160 aa16.68■□□□□ 0.26
SORT1-201ENST00000256637 ZNF726A6NNF4 738 aa16.68■□□□□ 0.26
SORT1-201ENST00000256637 ZC3H14Q6PJT7 736 aaKnown RBP16.68■□□□□ 0.26
SORT1-201ENST00000256637 PTCHD4Q6ZW05 846 aa16.68■□□□□ 0.26
SORT1-201ENST00000256637 OAFQ86UD1 273 aa16.68■□□□□ 0.26
SORT1-201ENST00000256637 ZNF433Q8N7K0 673 aaPredicted RBP16.68■□□□□ 0.26
SORT1-201ENST00000256637 SUSD3Q96L08 255 aa16.68■□□□□ 0.26
SORT1-201ENST00000256637 PCDHGA3Q9Y5H0 932 aa16.68■□□□□ 0.26
SORT1-201ENST00000256637 OR6C74A6NCV1 312 aa16.68■□□□□ 0.26
SORT1-201ENST00000256637 TRIM3O75382 744 aaPredicted RBP16.68■□□□□ 0.26
SORT1-201ENST00000256637 SOD2P04179 222 aa16.68■□□□□ 0.26
SORT1-201ENST00000256637 LAMP2P13473 410 aa16.68■□□□□ 0.26
SORT1-201ENST00000256637 UBAP2Q5T6F2 1119 aaKnown RBP16.68■□□□□ 0.26
SORT1-201ENST00000256637 ZNF567Q8N184 647 aa16.68■□□□□ 0.26
SORT1-201ENST00000256637 SH3YL1Q96HL8 342 aaPredicted RBP16.68■□□□□ 0.26
SORT1-201ENST00000256637 CITO14578 2027 aa16.68■□□□□ 0.26
SORT1-201ENST00000256637 MAGEH1Q9H213 219 aa16.68■□□□□ 0.26
SORT1-201ENST00000256637 GDF3Q9NR23 364 aa16.68■□□□□ 0.26
SORT1-201ENST00000256637 MFHAS1Q9Y4C4 1052 aa16.68■□□□□ 0.26
SORT1-201ENST00000256637 OR1A2Q9Y585 309 aa16.68■□□□□ 0.26
SORT1-201ENST00000256637 DGKBQ9Y6T7 804 aa16.68■□□□□ 0.26
SORT1-201ENST00000256637 ANPEPP15144 967 aa16.68■□□□□ 0.26
SORT1-201ENST00000256637 TCEAL6Q6IPX3 200 aa16.68■□□□□ 0.26
SORT1-201ENST00000256637 LRRTM4Q86VH4 590 aa16.68■□□□□ 0.26
SORT1-201ENST00000256637 CHST4Q8NCG5 386 aa16.68■□□□□ 0.26
SORT1-201ENST00000256637 C7orf57Q8NEG2 295 aa16.68■□□□□ 0.26
SORT1-201ENST00000256637 PUM1Q14671 1186 aaKnown RBP eCLIP16.67■□□□□ 0.26
SORT1-201ENST00000256637 STRADAQ7RTN6 431 aa16.67■□□□□ 0.26
SORT1-201ENST00000256637 GPAT4Q86UL3 456 aa16.67■□□□□ 0.26
SORT1-201ENST00000256637 CLIP4Q8N3C7 705 aa16.67■□□□□ 0.26
SORT1-201ENST00000256637 C12orf65Q9H3J6 166 aaKnown RBP16.67■□□□□ 0.26
SORT1-201ENST00000256637 FAM170BA6NMN3 283 aa16.67■□□□□ 0.26
SORT1-201ENST00000256637 AZIN1O14977 448 aa16.67■□□□□ 0.26
SORT1-201ENST00000256637 RNGTTO60942 597 aaKnown RBP16.67■□□□□ 0.26
SORT1-201ENST00000256637 ASLP04424 464 aa16.67■□□□□ 0.26
SORT1-201ENST00000256637 SNRPB2P08579 225 aaKnown RBP16.67■□□□□ 0.26
SORT1-201ENST00000256637 SLC25A3Q00325 362 aa16.67■□□□□ 0.26
SORT1-201ENST00000256637 OLIG2Q13516 323 aa16.67■□□□□ 0.26
SORT1-201ENST00000256637 TERF2Q15554 542 aa16.67■□□□□ 0.26
SORT1-201ENST00000256637 CLCC1Q96S66 551 aa16.67■□□□□ 0.26
SORT1-201ENST00000256637 CD248Q9HCU0 757 aa16.67■□□□□ 0.26
SORT1-201ENST00000256637 TBC1D23Q9NUY8 699 aa16.67■□□□□ 0.26
SORT1-201ENST00000256637 SAMHD1Q9Y3Z3 626 aaKnown RBP16.67■□□□□ 0.26
SORT1-201ENST00000256637 DOT1LQ8TEK3 1739 aa16.67■□□□□ 0.26
SORT1-201ENST00000256637 A0A0D9SEW6 157 aa16.67■□□□□ 0.26
SORT1-201ENST00000256637 CYP11A1P05108 521 aa16.67■□□□□ 0.26
SORT1-201ENST00000256637 PPP2R2BQ00005 443 aa16.67■□□□□ 0.26
SORT1-201ENST00000256637 PLEKHA7Q6IQ23 1121 aa16.67■□□□□ 0.26
SORT1-201ENST00000256637 TXNDC11Q6PKC3 985 aa16.67■□□□□ 0.26
SORT1-201ENST00000256637 NUP54Q7Z3B4 507 aa16.67■□□□□ 0.26
SORT1-201ENST00000256637 TSPAN18Q96SJ8 248 aa16.67■□□□□ 0.26
SORT1-201ENST00000256637 TMEM138Q9NPI0 162 aa16.67■□□□□ 0.26
SORT1-201ENST00000256637 CCR8P51685 355 aa16.67■□□□□ 0.26
SORT1-201ENST00000256637 ENPEPQ07075 957 aa16.67■□□□□ 0.26
SORT1-201ENST00000256637 NAB1Q13506 487 aa16.67■□□□□ 0.26
SORT1-201ENST00000256637 SEMA3AQ14563 771 aa16.67■□□□□ 0.26
SORT1-201ENST00000256637 CA9Q16790 459 aa16.67■□□□□ 0.26
SORT1-201ENST00000256637 PAAF1Q9BRP4 392 aa16.67■□□□□ 0.26
SORT1-201ENST00000256637 C11orf16Q9NQ32 467 aa16.67■□□□□ 0.26
SORT1-201ENST00000256637 PCDHB1Q9Y5F3 818 aa16.67■□□□□ 0.26
SORT1-201ENST00000256637 C5orf60A6NFR6 353 aa16.67■□□□□ 0.26
SORT1-201ENST00000256637 HCN1O60741 890 aa16.67■□□□□ 0.26
SORT1-201ENST00000256637 LRRC66Q68CR7 880 aa16.67■□□□□ 0.26
SORT1-201ENST00000256637 TNFAIP8L2Q6P589 184 aaPredicted RBP16.67■□□□□ 0.26
SORT1-201ENST00000256637 TMC3Q7Z5M5 1100 aa16.67■□□□□ 0.26
SORT1-201ENST00000256637 IRGQQ8WZA9 623 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms