RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 BEND6Q5SZJ8 279 aaPredicted RBP13.83□□□□□ -0.2
VPS25-201ENST00000253794 RBM20Q5T481 1227 aaKnown RBP13.83□□□□□ -0.2
VPS25-201ENST00000253794 HECTD2Q5U5R9 776 aa13.83□□□□□ -0.2
VPS25-201ENST00000253794 UGT3A1Q6NUS8 523 aa13.83□□□□□ -0.2
VPS25-201ENST00000253794 ZCCHC8Q6NZY4 707 aaKnown RBP13.83□□□□□ -0.2
VPS25-201ENST00000253794 SLC30A9Q6PML9 568 aa13.83□□□□□ -0.2
VPS25-201ENST00000253794 ADGRD1Q6QNK2 874 aa13.83□□□□□ -0.2
VPS25-201ENST00000253794 GATAD2AQ86YP4 633 aa13.83□□□□□ -0.2
VPS25-201ENST00000253794 SLC22A15Q8IZD6 547 aa13.83□□□□□ -0.2
VPS25-201ENST00000253794 KRT222Q8N1A0 295 aa13.83□□□□□ -0.2
VPS25-201ENST00000253794 GPR156Q8NFN8 814 aa13.83□□□□□ -0.2
VPS25-201ENST00000253794 GIMAP7Q8NHV1 300 aa13.83□□□□□ -0.2
VPS25-201ENST00000253794 BAHD1Q8TBE0 780 aaPredicted RBP13.83□□□□□ -0.2
VPS25-201ENST00000253794 CD200R1Q8TD46 325 aa13.83□□□□□ -0.2
VPS25-201ENST00000253794 DCAKDQ8WVC6 231 aa13.83□□□□□ -0.2
VPS25-201ENST00000253794 ELMO1Q92556 727 aa13.83□□□□□ -0.2
VPS25-201ENST00000253794 CCDC77Q9BR77 488 aa13.83□□□□□ -0.2
VPS25-201ENST00000253794 TAS2R13Q9NYV9 303 aa13.83□□□□□ -0.2
VPS25-201ENST00000253794 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.83□□□□□ -0.2
VPS25-201ENST00000253794 COL5A1P20908 1838 aaPredicted RBP13.83□□□□□ -0.2
VPS25-201ENST00000253794 KIR2DS5A0A0G2JLQ3 304 aa13.82□□□□□ -0.2
VPS25-201ENST00000253794 A0A0G2JNG1 304 aa13.82□□□□□ -0.2
VPS25-201ENST00000253794 HMX2A2RU54 273 aa13.82□□□□□ -0.2
VPS25-201ENST00000253794 OR5K4A6NMS3 321 aa13.82□□□□□ -0.2
VPS25-201ENST00000253794 E5RI56 91 aa13.82□□□□□ -0.2
VPS25-201ENST00000253794 KIR2DS3K7RE56 304 aa13.82□□□□□ -0.2
VPS25-201ENST00000253794 GDF9O60383 454 aa13.82□□□□□ -0.2
VPS25-201ENST00000253794 FAM155BO75949 473 aa13.82□□□□□ -0.2
VPS25-201ENST00000253794 TRIM16O95361 564 aa13.82□□□□□ -0.2
VPS25-201ENST00000253794 APOA4P06727 396 aa13.82□□□□□ -0.2
VPS25-201ENST00000253794 INHBAP08476 426 aa13.82□□□□□ -0.2
VPS25-201ENST00000253794 ITGA2BP08514 1039 aa13.82□□□□□ -0.2
VPS25-201ENST00000253794 CBSLP0DN79 551 aa13.82□□□□□ -0.2
VPS25-201ENST00000253794 SLC2A4P14672 509 aa13.82□□□□□ -0.2
VPS25-201ENST00000253794 BRAFP15056 766 aa13.82□□□□□ -0.2
VPS25-201ENST00000253794 H2AFXP16104 143 aaPredicted RBP13.82□□□□□ -0.2
VPS25-201ENST00000253794 CHRM3P20309 590 aa13.82□□□□□ -0.2
VPS25-201ENST00000253794 CBSP35520 551 aa13.82□□□□□ -0.2
VPS25-201ENST00000253794 MSH2P43246 934 aa13.82□□□□□ -0.2
VPS25-201ENST00000253794 CDKN2DP55273 166 aa13.82□□□□□ -0.2
VPS25-201ENST00000253794 KIR2DS5Q14953 304 aa13.82□□□□□ -0.2
VPS25-201ENST00000253794 TMED2Q15363 201 aa13.82□□□□□ -0.2
VPS25-201ENST00000253794 TTLL9Q3SXZ7 439 aa13.82□□□□□ -0.2
VPS25-201ENST00000253794 STPG1Q5TH74 334 aa13.82□□□□□ -0.2
VPS25-201ENST00000253794 CAPRIN2Q6IMN6 1127 aaKnown RBP13.82□□□□□ -0.2
VPS25-201ENST00000253794 IYDQ6PHW0 289 aa13.82□□□□□ -0.2
VPS25-201ENST00000253794 NEK10Q6ZWH5 1172 aa13.82□□□□□ -0.2
VPS25-201ENST00000253794 OTOAQ7RTW8 1153 aa13.82□□□□□ -0.2
VPS25-201ENST00000253794 PDZD3Q86UT5 571 aa13.82□□□□□ -0.2
VPS25-201ENST00000253794 CFAP206Q8IYR0 622 aa13.82□□□□□ -0.2
VPS25-201ENST00000253794 NAGSQ8N159 534 aa13.82□□□□□ -0.2
VPS25-201ENST00000253794 SFRP1Q8N474 314 aa13.82□□□□□ -0.2
VPS25-201ENST00000253794 ZBTB2Q8N680 514 aa13.82□□□□□ -0.2
VPS25-201ENST00000253794 LILRA3Q8N6C8 439 aaPredicted RBP13.82□□□□□ -0.2
VPS25-201ENST00000253794 FAM46DQ8NEK8 389 aa13.82□□□□□ -0.2
VPS25-201ENST00000253794 ACVR1CQ8NER5 493 aa13.82□□□□□ -0.2
VPS25-201ENST00000253794 UHMK1Q8TAS1 419 aaKnown RBP13.82□□□□□ -0.2
VPS25-201ENST00000253794 INPP5DQ92835 1189 aa13.82□□□□□ -0.2
VPS25-201ENST00000253794 TMEM159Q96B96 161 aa13.82□□□□□ -0.2
VPS25-201ENST00000253794 NDNQ99608 321 aa13.82□□□□□ -0.2
VPS25-201ENST00000253794 GPR21Q99679 349 aa13.82□□□□□ -0.2
VPS25-201ENST00000253794 OLFM1Q99784 485 aa13.82□□□□□ -0.2
VPS25-201ENST00000253794 TMEM109Q9BVC6 243 aa13.82□□□□□ -0.2
VPS25-201ENST00000253794 EURLQ9NYK6 297 aa13.82□□□□□ -0.2
VPS25-201ENST00000253794 NCKIPSDQ9NZQ3 722 aa13.82□□□□□ -0.2
VPS25-201ENST00000253794 GALPQ9UBC7 116 aa13.82□□□□□ -0.2
VPS25-201ENST00000253794 DNAJC16Q9Y2G8 782 aa13.82□□□□□ -0.2
VPS25-201ENST00000253794 MTO1Q9Y2Z2 717 aaKnown RBP13.82□□□□□ -0.2
VPS25-201ENST00000253794 ARID1BQ8NFD5 2236 aaPredicted RBP13.81□□□□□ -0.2
VPS25-201ENST00000253794 C4orf47A7E2U8 309 aa13.81□□□□□ -0.2
VPS25-201ENST00000253794 TRIM38O00635 465 aa13.81□□□□□ -0.2
VPS25-201ENST00000253794 NOBOXO60393 691 aa13.81□□□□□ -0.2
VPS25-201ENST00000253794 CBFA2T3O75081 653 aa13.81□□□□□ -0.2
VPS25-201ENST00000253794 EML2O95834 649 aa13.81□□□□□ -0.2
VPS25-201ENST00000253794 SHBGP04278 402 aa13.81□□□□□ -0.2
VPS25-201ENST00000253794 ENO3P13929 434 aaPredicted RBP13.81□□□□□ -0.2
VPS25-201ENST00000253794 ACADLP28330 430 aa13.81□□□□□ -0.2
VPS25-201ENST00000253794 PBLDP30039 288 aaPredicted RBP13.81□□□□□ -0.2
VPS25-201ENST00000253794 MAGEA12P43365 314 aa13.81□□□□□ -0.2
VPS25-201ENST00000253794 TAS2R39P59534 338 aa13.81□□□□□ -0.2
VPS25-201ENST00000253794 DNAJC3Q13217 504 aa13.81□□□□□ -0.2
VPS25-201ENST00000253794 BOP1Q14137 746 aaKnown RBP13.81□□□□□ -0.2
VPS25-201ENST00000253794 DEFB133Q30KQ1 61 aa13.81□□□□□ -0.2
VPS25-201ENST00000253794 PROX2Q3B8N5 592 aa13.81□□□□□ -0.2
VPS25-201ENST00000253794 LRRC8EQ6NSJ5 796 aa13.81□□□□□ -0.2
VPS25-201ENST00000253794 TAOK1Q7L7X3 1001 aa13.81□□□□□ -0.2
VPS25-201ENST00000253794 CCDC91Q7Z6B0 441 aa13.81□□□□□ -0.2
VPS25-201ENST00000253794 PIP4P1Q86T03 277 aa13.81□□□□□ -0.2
VPS25-201ENST00000253794 RASGRP3Q8IV61 690 aa13.81□□□□□ -0.2
VPS25-201ENST00000253794 ARL10Q8N8L6 244 aa13.81□□□□□ -0.2
VPS25-201ENST00000253794 GPATCH11Q8N954 259 aa13.81□□□□□ -0.2
VPS25-201ENST00000253794 AVL9Q8NBF6 648 aa13.81□□□□□ -0.2
VPS25-201ENST00000253794 NETO1Q8TDF5 533 aa13.81□□□□□ -0.2
VPS25-201ENST00000253794 ZDHHC1Q8WTX9 485 aa13.81□□□□□ -0.2
VPS25-201ENST00000253794 TSPAN17Q96FV3 270 aa13.81□□□□□ -0.2
VPS25-201ENST00000253794 PDLIM5Q96HC4 596 aaKnown RBP13.81□□□□□ -0.2
VPS25-201ENST00000253794 ELMO2Q96JJ3 720 aa13.81□□□□□ -0.2
VPS25-201ENST00000253794 SLC30A3Q99726 388 aa13.81□□□□□ -0.2
VPS25-201ENST00000253794 OSGEPL1Q9H4B0 414 aa13.81□□□□□ -0.2
VPS25-201ENST00000253794 PRDM8Q9NQV8 689 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms