RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 KCNK10P57789 538 aa16.75■□□□□ 0.27
FOXA1-201ENST00000250448 PLCL1Q15111 1095 aa16.75■□□□□ 0.27
FOXA1-201ENST00000250448 ITIH5Q86UX2 942 aa16.75■□□□□ 0.27
FOXA1-201ENST00000250448 TMC8Q8IU68 726 aa16.75■□□□□ 0.27
FOXA1-201ENST00000250448 VPS33AQ96AX1 596 aa16.75■□□□□ 0.27
FOXA1-201ENST00000250448 TCEAL4Q96EI5 215 aa16.75■□□□□ 0.27
FOXA1-201ENST00000250448 SPON2Q9BUD6 331 aa16.75■□□□□ 0.27
FOXA1-201ENST00000250448 KCTD3Q9Y597 815 aa16.75■□□□□ 0.27
FOXA1-201ENST00000250448 PSMD7P51665 324 aa16.75■□□□□ 0.27
FOXA1-201ENST00000250448 DSC2Q02487 901 aa16.75■□□□□ 0.27
FOXA1-201ENST00000250448 RCAN2Q14206 197 aa16.75■□□□□ 0.27
FOXA1-201ENST00000250448 MOGQ16653 247 aa16.75■□□□□ 0.27
FOXA1-201ENST00000250448 ZNF773Q6PK81 442 aa16.75■□□□□ 0.27
FOXA1-201ENST00000250448 DCDC5Q6ZRR9 648 aa16.75■□□□□ 0.27
FOXA1-201ENST00000250448 OR13F1Q8NGS4 319 aa16.75■□□□□ 0.27
FOXA1-201ENST00000250448 ATOH8Q96SQ7 321 aa16.75■□□□□ 0.27
FOXA1-201ENST00000250448 UXTQ9UBK9 157 aaPredicted RBP16.75■□□□□ 0.27
FOXA1-201ENST00000250448 OBSL1O75147 1896 aa16.74■□□□□ 0.27
FOXA1-201ENST00000250448 MMP2P08253 660 aa16.74■□□□□ 0.27
FOXA1-201ENST00000250448 NAT2P11245 290 aa16.74■□□□□ 0.27
FOXA1-201ENST00000250448 PORP16435 677 aaPredicted RBP16.74■□□□□ 0.27
FOXA1-201ENST00000250448 ZNF37AP17032 561 aaPredicted RBP16.74■□□□□ 0.27
FOXA1-201ENST00000250448 SOX11P35716 441 aa16.74■□□□□ 0.27
FOXA1-201ENST00000250448 EEFSECP57772 596 aaKnown RBP16.74■□□□□ 0.27
FOXA1-201ENST00000250448 TIAL1Q01085 375 aaKnown RBP eCLIP16.74■□□□□ 0.27
FOXA1-201ENST00000250448 NFATC3Q12968 1075 aa16.74■□□□□ 0.27
FOXA1-201ENST00000250448 AASDHQ4L235 1098 aaPredicted RBP16.74■□□□□ 0.27
FOXA1-201ENST00000250448 OGFOD2Q6N063 350 aa16.74■□□□□ 0.27
FOXA1-201ENST00000250448 ACDQ96AP0 544 aa16.74■□□□□ 0.27
FOXA1-201ENST00000250448 PLD4Q96BZ4 506 aa16.74■□□□□ 0.27
FOXA1-201ENST00000250448 EMILIN2Q9BXX0 1053 aa16.74■□□□□ 0.27
FOXA1-201ENST00000250448 LRRC3Q9BY71 257 aa16.74■□□□□ 0.27
FOXA1-201ENST00000250448 H0YAE9 185 aa16.74■□□□□ 0.27
FOXA1-201ENST00000250448 EEDO75530 441 aaKnown RBP16.74■□□□□ 0.27
FOXA1-201ENST00000250448 ALBP02768 609 aa16.74■□□□□ 0.27
FOXA1-201ENST00000250448 POLR2IP36954 125 aaKnown RBP16.74■□□□□ 0.27
FOXA1-201ENST00000250448 RENBPP51606 427 aa16.74■□□□□ 0.27
FOXA1-201ENST00000250448 NTHL1P78549 312 aa16.74■□□□□ 0.27
FOXA1-201ENST00000250448 CREMQ03060 361 aa16.74■□□□□ 0.27
FOXA1-201ENST00000250448 IHHQ14623 411 aa16.74■□□□□ 0.27
FOXA1-201ENST00000250448 SHHQ15465 462 aa16.74■□□□□ 0.27
FOXA1-201ENST00000250448 TGFBIQ15582 683 aa16.74■□□□□ 0.27
FOXA1-201ENST00000250448 FUT11Q495W5 492 aa16.74■□□□□ 0.27
FOXA1-201ENST00000250448 PAGE3Q5JUK9 113 aa16.74■□□□□ 0.27
FOXA1-201ENST00000250448 SIRPB2Q5JXA9 342 aa16.74■□□□□ 0.27
FOXA1-201ENST00000250448 SPATA19Q7Z5L4 167 aa16.74■□□□□ 0.27
FOXA1-201ENST00000250448 RHEBL1Q8TAI7 183 aa16.74■□□□□ 0.27
FOXA1-201ENST00000250448 AIG1Q9NVV5 245 aa16.74■□□□□ 0.27
FOXA1-201ENST00000250448 COQ6Q9Y2Z9 468 aa16.74■□□□□ 0.27
FOXA1-201ENST00000250448 V9GYQ6 96 aa16.74■□□□□ 0.27
FOXA1-201ENST00000250448 A0A1B0GTL3 188 aa16.73■□□□□ 0.27
FOXA1-201ENST00000250448 H3BNC9 293 aa16.73■□□□□ 0.27
FOXA1-201ENST00000250448 CRCPO75575 148 aa16.73■□□□□ 0.27
FOXA1-201ENST00000250448 OCM2P0CE71 109 aa16.73■□□□□ 0.27
FOXA1-201ENST00000250448 OCMP0CE72 109 aaPredicted RBP16.73■□□□□ 0.27
FOXA1-201ENST00000250448 CCNA2P20248 432 aa16.73■□□□□ 0.27
FOXA1-201ENST00000250448 MAP4P27816 1152 aaKnown RBP16.73■□□□□ 0.27
FOXA1-201ENST00000250448 PBX2P40425 430 aa16.73■□□□□ 0.27
FOXA1-201ENST00000250448 CCR3P51677 355 aa16.73■□□□□ 0.27
FOXA1-201ENST00000250448 SUOXP51687 545 aa16.73■□□□□ 0.27
FOXA1-201ENST00000250448 CLCN4P51793 760 aa16.73■□□□□ 0.27
FOXA1-201ENST00000250448 MAPK10P53779 464 aa16.73■□□□□ 0.27
FOXA1-201ENST00000250448 LCP2Q13094 533 aa16.73■□□□□ 0.27
FOXA1-201ENST00000250448 SPIDRQ14159 915 aa16.73■□□□□ 0.27
FOXA1-201ENST00000250448 ADGRF1Q5T601 910 aa16.73■□□□□ 0.27
FOXA1-201ENST00000250448 TEX37Q96LM6 180 aa16.73■□□□□ 0.27
FOXA1-201ENST00000250448 SEPHS2Q99611 448 aa16.73■□□□□ 0.27
FOXA1-201ENST00000250448 EYSQ5T1H1 3165 aa16.73■□□□□ 0.27
FOXA1-201ENST00000250448 CARNS1A5YM72 827 aa16.73■□□□□ 0.27
FOXA1-201ENST00000250448 CYBBP04839 570 aa16.73■□□□□ 0.27
FOXA1-201ENST00000250448 HOXB8P17481 243 aaPredicted RBP16.73■□□□□ 0.27
FOXA1-201ENST00000250448 MATN1P21941 496 aa16.73■□□□□ 0.27
FOXA1-201ENST00000250448 EEF1DP29692 281 aaKnown RBP16.73■□□□□ 0.27
FOXA1-201ENST00000250448 ZFP36L2P47974 494 aaKnown RBP16.73■□□□□ 0.27
FOXA1-201ENST00000250448 CLCQ05315 142 aa16.73■□□□□ 0.27
FOXA1-201ENST00000250448 TRAF2Q12933 501 aa16.73■□□□□ 0.27
FOXA1-201ENST00000250448 SERINC3Q13530 473 aa16.73■□□□□ 0.27
FOXA1-201ENST00000250448 TBPL2Q6SJ96 375 aa16.73■□□□□ 0.27
FOXA1-201ENST00000250448 KIAA2013Q8IYS2 634 aa16.73■□□□□ 0.27
FOXA1-201ENST00000250448 PGBD5Q8N414 524 aa16.73■□□□□ 0.27
FOXA1-201ENST00000250448 LEMD2Q8NC56 503 aa16.73■□□□□ 0.27
FOXA1-201ENST00000250448 PHOSPHO2Q8TCD6 241 aa16.73■□□□□ 0.27
FOXA1-201ENST00000250448 MRPS31Q92665 395 aaKnown RBP16.73■□□□□ 0.27
FOXA1-201ENST00000250448 BIRC7Q96CA5 298 aa16.73■□□□□ 0.27
FOXA1-201ENST00000250448 TBATAQ96M53 351 aa16.73■□□□□ 0.27
FOXA1-201ENST00000250448 TMEM74Q96NL1 305 aa16.73■□□□□ 0.27
FOXA1-201ENST00000250448 TFB2MQ9H5Q4 396 aaKnown RBP16.73■□□□□ 0.27
FOXA1-201ENST00000250448 FANCEQ9HB96 536 aa16.73■□□□□ 0.27
FOXA1-201ENST00000250448 PALMDQ9NP74 551 aa16.73■□□□□ 0.27
FOXA1-201ENST00000250448 LEF1Q9UJU2 399 aaPredicted RBP16.73■□□□□ 0.27
FOXA1-201ENST00000250448 USP22Q9UPT9 525 aa16.73■□□□□ 0.27
FOXA1-201ENST00000250448 TYW5A2RUC4 315 aaKnown RBP16.72■□□□□ 0.27
FOXA1-201ENST00000250448 SUPT3HB4E1H0 165 aa16.72■□□□□ 0.27
FOXA1-201ENST00000250448 LDB2O43679 373 aa16.72■□□□□ 0.27
FOXA1-201ENST00000250448 PRR35P0CG20 571 aa16.72■□□□□ 0.27
FOXA1-201ENST00000250448 ZNF182P17025 639 aaPredicted RBP16.72■□□□□ 0.27
FOXA1-201ENST00000250448 JUNBP17275 347 aaPredicted RBP16.72■□□□□ 0.27
FOXA1-201ENST00000250448 HRH2P25021 359 aa16.72■□□□□ 0.27
FOXA1-201ENST00000250448 MRPL19P49406 292 aaKnown RBP16.72■□□□□ 0.27
FOXA1-201ENST00000250448 BMXP51813 675 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms