RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 DACH2Q96NX9 599 aa16.63■□□□□ 0.25
SGPP1-201ENST00000247225 DPY30Q9C005 99 aa16.63■□□□□ 0.25
SGPP1-201ENST00000247225 IPPKQ9H8X2 491 aa16.63■□□□□ 0.25
SGPP1-201ENST00000247225 MRGBPQ9NV56 204 aa16.63■□□□□ 0.25
SGPP1-201ENST00000247225 NEU3Q9UQ49 428 aa16.63■□□□□ 0.25
SGPP1-201ENST00000247225 CLDN25C9JDP6 229 aa16.62■□□□□ 0.25
SGPP1-201ENST00000247225 ZNF646O15015 1829 aaPredicted RBP16.62■□□□□ 0.25
SGPP1-201ENST00000247225 ABCB7O75027 752 aa16.62■□□□□ 0.25
SGPP1-201ENST00000247225 SERPINA1P01009 418 aa16.62■□□□□ 0.25
SGPP1-201ENST00000247225 CRHBPP24387 322 aa16.62■□□□□ 0.25
SGPP1-201ENST00000247225 CDC42EP1Q00587 391 aa16.62■□□□□ 0.25
SGPP1-201ENST00000247225 TAF10Q12962 218 aa16.62■□□□□ 0.25
SGPP1-201ENST00000247225 DDX39BQ13838 428 aaKnown RBP16.62■□□□□ 0.25
SGPP1-201ENST00000247225 PTRHD1Q6GMV3 140 aaKnown RBP16.62■□□□□ 0.25
SGPP1-201ENST00000247225 TMEM179BQ7Z7N9 219 aa16.62■□□□□ 0.25
SGPP1-201ENST00000247225 PLD3Q8IV08 490 aa16.62■□□□□ 0.25
SGPP1-201ENST00000247225 BARD1Q99728 777 aaKnown RBP16.62■□□□□ 0.25
SGPP1-201ENST00000247225 CINPQ9BW66 212 aaPredicted RBP16.62■□□□□ 0.25
SGPP1-201ENST00000247225 TM6SF2Q9BZW4 377 aa16.62■□□□□ 0.25
SGPP1-201ENST00000247225 KATNBL1Q9H079 304 aa16.62■□□□□ 0.25
SGPP1-201ENST00000247225 CCSER2Q9H7U1 834 aa16.62■□□□□ 0.25
SGPP1-201ENST00000247225 KERAO60938 352 aa16.62■□□□□ 0.25
SGPP1-201ENST00000247225 NDUFS2O75306 463 aa16.62■□□□□ 0.25
SGPP1-201ENST00000247225 S100BP04271 92 aaPredicted RBP16.62■□□□□ 0.25
SGPP1-201ENST00000247225 HSMCR30P0CW71 290 aa16.62■□□□□ 0.25
SGPP1-201ENST00000247225 UROSP10746 265 aa16.62■□□□□ 0.25
SGPP1-201ENST00000247225 HPCAL1P37235 193 aa16.62■□□□□ 0.25
SGPP1-201ENST00000247225 ERVK-8P63133 956 aa16.62■□□□□ 0.25
SGPP1-201ENST00000247225 ARHGEF7Q14155 803 aa16.62■□□□□ 0.25
SGPP1-201ENST00000247225 C8orf82Q6P1X6 216 aaPredicted RBP16.62■□□□□ 0.25
SGPP1-201ENST00000247225 TXNDC11Q6PKC3 985 aa16.62■□□□□ 0.25
SGPP1-201ENST00000247225 LRRC8DQ7L1W4 858 aa16.62■□□□□ 0.25
SGPP1-201ENST00000247225 KIAA1191Q96A73 305 aa16.62■□□□□ 0.25
SGPP1-201ENST00000247225 SMPD4Q9NXE4 827 aa16.62■□□□□ 0.25
SGPP1-201ENST00000247225 A6NL46 340 aa16.62■□□□□ 0.25
SGPP1-201ENST00000247225 DBTP11182 482 aaKnown RBP16.62■□□□□ 0.25
SGPP1-201ENST00000247225 ADARB1P78563 741 aaKnown RBP16.62■□□□□ 0.25
SGPP1-201ENST00000247225 TSTA3Q13630 321 aaPredicted RBP16.62■□□□□ 0.25
SGPP1-201ENST00000247225 CRY1Q16526 586 aa16.62■□□□□ 0.25
SGPP1-201ENST00000247225 SYTL1Q8IYJ3 562 aa16.62■□□□□ 0.25
SGPP1-201ENST00000247225 ZNF540Q8NDQ6 660 aa16.62■□□□□ 0.25
SGPP1-201ENST00000247225 RAB2BQ8WUD1 216 aa16.62■□□□□ 0.25
SGPP1-201ENST00000247225 FAM120BQ96EK7 910 aaKnown RBP16.62■□□□□ 0.25
SGPP1-201ENST00000247225 ZNF599Q96NL3 588 aa16.62■□□□□ 0.25
SGPP1-201ENST00000247225 OR52E6Q96RD3 313 aa16.62■□□□□ 0.25
SGPP1-201ENST00000247225 ACBD6Q9BR61 282 aa16.62■□□□□ 0.25
SGPP1-201ENST00000247225 ERGIC3Q9Y282 383 aa16.62■□□□□ 0.25
SGPP1-201ENST00000247225 KPNA4O00629 521 aaPredicted RBP16.61■□□□□ 0.25
SGPP1-201ENST00000247225 CACNG3O60359 315 aa16.61■□□□□ 0.25
SGPP1-201ENST00000247225 ANGPTL1O95841 491 aa16.61■□□□□ 0.25
SGPP1-201ENST00000247225 RAP2AP10114 183 aa16.61■□□□□ 0.25
SGPP1-201ENST00000247225 MAGEA8P43361 318 aa16.61■□□□□ 0.25
SGPP1-201ENST00000247225 PCYT1AP49585 367 aa16.61■□□□□ 0.25
SGPP1-201ENST00000247225 CLK1P49759 484 aaKnown RBP16.61■□□□□ 0.25
SGPP1-201ENST00000247225 ARMC12Q5T9G4 340 aa16.61■□□□□ 0.25
SGPP1-201ENST00000247225 MSANTD2Q6P1R3 559 aa16.61■□□□□ 0.25
SGPP1-201ENST00000247225 FAM151BQ6UXP7 276 aa16.61■□□□□ 0.25
SGPP1-201ENST00000247225 ZNF280BQ86YH2 543 aa16.61■□□□□ 0.25
SGPP1-201ENST00000247225 ARL10Q8N8L6 244 aa16.61■□□□□ 0.25
SGPP1-201ENST00000247225 ZNF420Q8TAQ5 688 aaPredicted RBP16.61■□□□□ 0.25
SGPP1-201ENST00000247225 RERGLQ9H628 205 aa16.61■□□□□ 0.25
SGPP1-201ENST00000247225 PADI3Q9ULW8 664 aa16.61■□□□□ 0.25
SGPP1-201ENST00000247225 ZNF232Q9UNY5 417 aa16.61■□□□□ 0.25
SGPP1-201ENST00000247225 ZNF451Q9Y4E5 1061 aa16.61■□□□□ 0.25
SGPP1-201ENST00000247225 PCDHGA4Q9Y5G9 962 aa16.61■□□□□ 0.25
SGPP1-201ENST00000247225 MGEA5O60502 916 aa16.61■□□□□ 0.25
SGPP1-201ENST00000247225 C1QCP02747 245 aa16.61■□□□□ 0.25
SGPP1-201ENST00000247225 ALPLP05186 524 aa16.61■□□□□ 0.25
SGPP1-201ENST00000247225 CDH1P12830 882 aa16.61■□□□□ 0.25
SGPP1-201ENST00000247225 RAPSNQ13702 412 aa16.61■□□□□ 0.25
SGPP1-201ENST00000247225 PDCD4Q53EL6 469 aaKnown RBP16.61■□□□□ 0.25
SGPP1-201ENST00000247225 TTC23Q5W5X9 447 aa16.61■□□□□ 0.25
SGPP1-201ENST00000247225 XAF1Q6GPH4 301 aa16.61■□□□□ 0.25
SGPP1-201ENST00000247225 SLC22A16Q86VW1 577 aa16.61■□□□□ 0.25
SGPP1-201ENST00000247225 LIX1Q8N485 282 aa16.61■□□□□ 0.25
SGPP1-201ENST00000247225 BRSK1Q8TDC3 778 aa16.61■□□□□ 0.25
SGPP1-201ENST00000247225 RSPH1Q8WYR4 309 aa16.61■□□□□ 0.25
SGPP1-201ENST00000247225 TPD52L3Q96J77 140 aa16.61■□□□□ 0.25
SGPP1-201ENST00000247225 ALOXE3Q9BYJ1 711 aa16.61■□□□□ 0.25
SGPP1-201ENST00000247225 WWOXQ9NZC7 414 aa16.61■□□□□ 0.25
SGPP1-201ENST00000247225 PCTPQ9UKL6 214 aa16.61■□□□□ 0.25
SGPP1-201ENST00000247225 LOC100130705A0A1B0GUX0 176 aa16.6■□□□□ 0.25
SGPP1-201ENST00000247225 C2orf81A6NN90 581 aa16.6■□□□□ 0.25
SGPP1-201ENST00000247225 TNPO2O14787 897 aaKnown RBP16.6■□□□□ 0.25
SGPP1-201ENST00000247225 PEX11BO96011 259 aa16.6■□□□□ 0.25
SGPP1-201ENST00000247225 PKMP14618 531 aaKnown RBP16.6■□□□□ 0.25
SGPP1-201ENST00000247225 AHSA2Q719I0 299 aa16.6■□□□□ 0.25
SGPP1-201ENST00000247225 ATG16L2Q8NAA4 619 aa16.6■□□□□ 0.25
SGPP1-201ENST00000247225 CHDHQ8NE62 594 aaPredicted RBP16.6■□□□□ 0.25
SGPP1-201ENST00000247225 BRI3BPQ8WY22 251 aa16.6■□□□□ 0.25
SGPP1-201ENST00000247225 SH3YL1Q96HL8 342 aaPredicted RBP16.6■□□□□ 0.25
SGPP1-201ENST00000247225 SMOC2Q9H3U7 446 aa16.6■□□□□ 0.25
SGPP1-201ENST00000247225 TFB2MQ9H5Q4 396 aaKnown RBP16.6■□□□□ 0.25
SGPP1-201ENST00000247225 KIF17Q9P2E2 1029 aa16.6■□□□□ 0.25
SGPP1-201ENST00000247225 SEPT3Q9UH03 358 aa16.6■□□□□ 0.25
SGPP1-201ENST00000247225 FAM234BA2RU67 622 aa16.6■□□□□ 0.25
SGPP1-201ENST00000247225 RECQL5O94762 991 aaPredicted RBP16.6■□□□□ 0.25
SGPP1-201ENST00000247225 FGF4P08620 206 aa16.6■□□□□ 0.25
SGPP1-201ENST00000247225 FAM163BP0C2L3 166 aa16.6■□□□□ 0.25
SGPP1-201ENST00000247225 RNF19BQ6ZMZ0 732 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms