RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 SERPINA6P08185 405 aa13□□□□□ -0.33
SLIRP-201ENST00000238688 ENO2P09104 434 aaPredicted RBP13□□□□□ -0.33
SLIRP-201ENST00000238688 NDUFV2P19404 249 aa13□□□□□ -0.33
SLIRP-201ENST00000238688 TEAD1P28347 426 aa13□□□□□ -0.33
SLIRP-201ENST00000238688 GLRBP48167 497 aa13□□□□□ -0.33
SLIRP-201ENST00000238688 DHPSP49366 369 aaPredicted RBP13□□□□□ -0.33
SLIRP-201ENST00000238688 NAGLUP54802 743 aa13□□□□□ -0.33
SLIRP-201ENST00000238688 ALDH18A1P54886 795 aaKnown RBP13□□□□□ -0.33
SLIRP-201ENST00000238688 ZBTB16Q05516 673 aa13□□□□□ -0.33
SLIRP-201ENST00000238688 RALGDSQ12967 914 aa13□□□□□ -0.33
SLIRP-201ENST00000238688 BNIP1Q12981 228 aa13□□□□□ -0.33
SLIRP-201ENST00000238688 SP140Q13342 867 aa13□□□□□ -0.33
SLIRP-201ENST00000238688 KRT72Q14CN4 511 aa13□□□□□ -0.33
SLIRP-201ENST00000238688 AGERQ15109 404 aa13□□□□□ -0.33
SLIRP-201ENST00000238688 PEAR1Q5VY43 1037 aaPredicted RBP13□□□□□ -0.33
SLIRP-201ENST00000238688 PAQR3Q6TCH7 311 aa13□□□□□ -0.33
SLIRP-201ENST00000238688 LIPIQ6XZB0 460 aa13□□□□□ -0.33
SLIRP-201ENST00000238688 FRMD7Q6ZUT3 714 aa13□□□□□ -0.33
SLIRP-201ENST00000238688 ERN2Q76MJ5 926 aaKnown RBP13□□□□□ -0.33
SLIRP-201ENST00000238688 PARS2Q7L3T8 475 aaKnown RBP13□□□□□ -0.33
SLIRP-201ENST00000238688 EFL1Q7Z2Z2 1120 aaKnown RBP13□□□□□ -0.33
SLIRP-201ENST00000238688 CHPFQ8IZ52 775 aa13□□□□□ -0.33
SLIRP-201ENST00000238688 ANKRD49Q8WVL7 239 aa13□□□□□ -0.33
SLIRP-201ENST00000238688 SORCS1Q8WY21 1168 aa13□□□□□ -0.33
SLIRP-201ENST00000238688 SKA1Q96BD8 255 aa13□□□□□ -0.33
SLIRP-201ENST00000238688 CCT7Q99832 543 aa13□□□□□ -0.33
SLIRP-201ENST00000238688 ALG9Q9H6U8 611 aa13□□□□□ -0.33
SLIRP-201ENST00000238688 KCNK13Q9HB14 408 aa13□□□□□ -0.33
SLIRP-201ENST00000238688 RDH14Q9HBH5 336 aa13□□□□□ -0.33
SLIRP-201ENST00000238688 NUDT4Q9NZJ9 180 aa13□□□□□ -0.33
SLIRP-201ENST00000238688 TRIM33Q9UPN9 1127 aa13□□□□□ -0.33
SLIRP-201ENST00000238688 DNAJC16Q9Y2G8 782 aa13□□□□□ -0.33
SLIRP-201ENST00000238688 RRP15Q9Y3B9 282 aaKnown RBP13□□□□□ -0.33
SLIRP-201ENST00000238688 STON1Q9Y6Q2 735 aa13□□□□□ -0.33
SLIRP-201ENST00000238688 CABIN1Q9Y6J0 2220 aa13□□□□□ -0.33
SLIRP-201ENST00000238688 IGHV1OR15-9A0A0B4J2B8 117 aa12.99□□□□□ -0.33
SLIRP-201ENST00000238688 MATN2O00339 956 aa12.99□□□□□ -0.33
SLIRP-201ENST00000238688 ZBTB14O43829 449 aa12.99□□□□□ -0.33
SLIRP-201ENST00000238688 MLYCDO95822 493 aa12.99□□□□□ -0.33
SLIRP-201ENST00000238688 TSPAN12O95859 305 aa12.99□□□□□ -0.33
SLIRP-201ENST00000238688 ADRB3P13945 408 aa12.99□□□□□ -0.33
SLIRP-201ENST00000238688 C5AR1P21730 350 aa12.99□□□□□ -0.33
SLIRP-201ENST00000238688 IL12RB1P42701 662 aa12.99□□□□□ -0.33
SLIRP-201ENST00000238688 MNAT1P51948 309 aa12.99□□□□□ -0.33
SLIRP-201ENST00000238688 PLOD1Q02809 727 aaPredicted RBP12.99□□□□□ -0.33
SLIRP-201ENST00000238688 STARD3Q14849 445 aa12.99□□□□□ -0.33
SLIRP-201ENST00000238688 SETMARQ53H47 684 aaPredicted RBP12.99□□□□□ -0.33
SLIRP-201ENST00000238688 PLEKHS1Q5SXH7 462 aa12.99□□□□□ -0.33
SLIRP-201ENST00000238688 GPRC6AQ5T6X5 926 aa12.99□□□□□ -0.33
SLIRP-201ENST00000238688 SEL1L3Q68CR1 1132 aa12.99□□□□□ -0.33
SLIRP-201ENST00000238688 SDE2Q6IQ49 451 aa12.99□□□□□ -0.33
SLIRP-201ENST00000238688 TMEM207Q6UWW9 146 aa12.99□□□□□ -0.33
SLIRP-201ENST00000238688 ZCCHC23Q6ZST2 131 aa12.99□□□□□ -0.33
SLIRP-201ENST00000238688 ARMCX6Q7L4S7 300 aa12.99□□□□□ -0.33
SLIRP-201ENST00000238688 PIM3Q86V86 326 aa12.99□□□□□ -0.33
SLIRP-201ENST00000238688 MYO1HQ8N1T3 1032 aa12.99□□□□□ -0.33
SLIRP-201ENST00000238688 PGBD3Q8N328 593 aa12.99□□□□□ -0.33
SLIRP-201ENST00000238688 ZBTB2Q8N680 514 aa12.99□□□□□ -0.33
SLIRP-201ENST00000238688 FITM2Q8N6M3 262 aa12.99□□□□□ -0.33
SLIRP-201ENST00000238688 PIGKQ92643 395 aa12.99□□□□□ -0.33
SLIRP-201ENST00000238688 DTD2Q96FN9 168 aa12.99□□□□□ -0.33
SLIRP-201ENST00000238688 MRGPRX1Q96LB2 322 aa12.99□□□□□ -0.33
SLIRP-201ENST00000238688 RMDN2Q96LZ7 410 aa12.99□□□□□ -0.33
SLIRP-201ENST00000238688 COQ10AQ96MF6 247 aa12.99□□□□□ -0.33
SLIRP-201ENST00000238688 FAM129BQ96TA1 746 aa12.99□□□□□ -0.33
SLIRP-201ENST00000238688 CCDC28BQ9BUN5 200 aa12.99□□□□□ -0.33
SLIRP-201ENST00000238688 EDEM2Q9BV94 578 aa12.99□□□□□ -0.33
SLIRP-201ENST00000238688 SPATA16Q9BXB7 569 aa12.99□□□□□ -0.33
SLIRP-201ENST00000238688 RSPH9Q9H1X1 276 aaPredicted RBP12.99□□□□□ -0.33
SLIRP-201ENST00000238688 ZFP69BQ9UJL9 534 aa12.99□□□□□ -0.33
SLIRP-201ENST00000238688 RNF112Q9ULX5 631 aa12.99□□□□□ -0.33
SLIRP-201ENST00000238688 C4orf47A7E2U8 309 aa12.98□□□□□ -0.33
SLIRP-201ENST00000238688 GPR89AB7ZAQ6 455 aa12.98□□□□□ -0.33
SLIRP-201ENST00000238688 RAD51BO15315 384 aa12.98□□□□□ -0.33
SLIRP-201ENST00000238688 SLC16A5O15375 505 aa12.98□□□□□ -0.33
SLIRP-201ENST00000238688 OR1I1O60431 355 aa12.98□□□□□ -0.33
SLIRP-201ENST00000238688 NIPSNAP2O75323 286 aa12.98□□□□□ -0.33
SLIRP-201ENST00000238688 DNAJC8O75937 253 aaPredicted RBP12.98□□□□□ -0.33
SLIRP-201ENST00000238688 UNC5CO95185 931 aa12.98□□□□□ -0.33
SLIRP-201ENST00000238688 S100BP04271 92 aaPredicted RBP12.98□□□□□ -0.33
SLIRP-201ENST00000238688 GPR89BP0CG08 455 aa12.98□□□□□ -0.33
SLIRP-201ENST00000238688 MPC1LP0DKB6 136 aa12.98□□□□□ -0.33
SLIRP-201ENST00000238688 ATP1B2P14415 290 aaPredicted RBP12.98□□□□□ -0.33
SLIRP-201ENST00000238688 ITPKAP23677 461 aa12.98□□□□□ -0.33
SLIRP-201ENST00000238688 PIK3CGP48736 1102 aa12.98□□□□□ -0.33
SLIRP-201ENST00000238688 CDKN1CP49918 316 aaPredicted RBP12.98□□□□□ -0.33
SLIRP-201ENST00000238688 AQP5P55064 265 aa12.98□□□□□ -0.33
SLIRP-201ENST00000238688 CDKL1Q00532 357 aa12.98□□□□□ -0.33
SLIRP-201ENST00000238688 OVGP1Q12889 678 aa12.98□□□□□ -0.33
SLIRP-201ENST00000238688 GBX1Q14549 363 aa12.98□□□□□ -0.33
SLIRP-201ENST00000238688 ATP13A5Q4VNC0 1218 aa12.98□□□□□ -0.33
SLIRP-201ENST00000238688 ARL13AQ5H913 290 aaPredicted RBP12.98□□□□□ -0.33
SLIRP-201ENST00000238688 ZNF678Q5SXM1 525 aa12.98□□□□□ -0.33
SLIRP-201ENST00000238688 LPCAT2Q7L5N7 544 aa12.98□□□□□ -0.33
SLIRP-201ENST00000238688 CLNKQ7Z7G1 428 aa12.98□□□□□ -0.33
SLIRP-201ENST00000238688 GPSM1Q86YR5 675 aa12.98□□□□□ -0.33
SLIRP-201ENST00000238688 PHYKPLQ8IUZ5 450 aa12.98□□□□□ -0.33
SLIRP-201ENST00000238688 TCAIMQ8N3R3 496 aa12.98□□□□□ -0.33
SLIRP-201ENST00000238688 FBXO39Q8N4B4 442 aa12.98□□□□□ -0.33
SLIRP-201ENST00000238688 DEFB119Q8N690 84 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms