RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 CHRNA6Q15825 494 aa9□□□□□ -0.97
SYDE2-201ENST00000234668 FAM174BQ3ZCQ3 159 aa9□□□□□ -0.97
SYDE2-201ENST00000234668 LHX8Q68G74 356 aa9□□□□□ -0.97
SYDE2-201ENST00000234668 LCN8Q6JVE9 175 aa9□□□□□ -0.97
SYDE2-201ENST00000234668 AQP12AQ8IXF9 295 aa9□□□□□ -0.97
SYDE2-201ENST00000234668 C10orf111Q8N326 155 aa9□□□□□ -0.97
SYDE2-201ENST00000234668 B4GALNT2Q8NHY0 566 aa9□□□□□ -0.97
SYDE2-201ENST00000234668 DDI1Q8WTU0 396 aa9□□□□□ -0.97
SYDE2-201ENST00000234668 ANKRD60Q9BZ19 345 aa9□□□□□ -0.97
SYDE2-201ENST00000234668 CLPBQ9H078 707 aa9□□□□□ -0.97
SYDE2-201ENST00000234668 PREBQ9HCU5 417 aa9□□□□□ -0.97
SYDE2-201ENST00000234668 IL26Q9NPH9 171 aa9□□□□□ -0.97
SYDE2-201ENST00000234668 NDUFA13Q9P0J0 144 aa9□□□□□ -0.97
SYDE2-201ENST00000234668 AASSQ9UDR5 926 aa9□□□□□ -0.97
SYDE2-201ENST00000234668 RSL24D1Q9UHA3 163 aaKnown RBP9□□□□□ -0.97
SYDE2-201ENST00000234668 CD84Q9UIB8 345 aa9□□□□□ -0.97
SYDE2-201ENST00000234668 CNOT11Q9UKZ1 510 aaKnown RBP9□□□□□ -0.97
SYDE2-201ENST00000234668 MYOFQ9NZM1 2061 aa9□□□□□ -0.97
SYDE2-201ENST00000234668 LOC730098B7Z3J9 87 aa9□□□□□ -0.97
SYDE2-201ENST00000234668 CALRP27797 417 aaKnown RBP9□□□□□ -0.97
SYDE2-201ENST00000234668 RFC2P35250 354 aa9□□□□□ -0.97
SYDE2-201ENST00000234668 CTSOP43234 321 aaPredicted RBP9□□□□□ -0.97
SYDE2-201ENST00000234668 RANBP1P43487 201 aa9□□□□□ -0.97
SYDE2-201ENST00000234668 PMS2P3Q13401 168 aa9□□□□□ -0.97
SYDE2-201ENST00000234668 SF1Q15637 639 aaKnown RBP9□□□□□ -0.97
SYDE2-201ENST00000234668 SPANXN4Q5MJ08 99 aa9□□□□□ -0.97
SYDE2-201ENST00000234668 ALG1LQ6GMV1 187 aa9□□□□□ -0.97
SYDE2-201ENST00000234668 DLEU7Q6UYE1 221 aa9□□□□□ -0.97
SYDE2-201ENST00000234668 ARHGAP22Q7Z5H3 698 aa9□□□□□ -0.97
SYDE2-201ENST00000234668 SPATA19Q7Z5L4 167 aa9□□□□□ -0.97
SYDE2-201ENST00000234668 DNAJB7Q7Z6W7 309 aaPredicted RBP9□□□□□ -0.97
SYDE2-201ENST00000234668 GALNT10Q86SR1 603 aa9□□□□□ -0.97
SYDE2-201ENST00000234668 ITIH5Q86UX2 942 aa9□□□□□ -0.97
SYDE2-201ENST00000234668 ZSWIM9Q86XI8 627 aa9□□□□□ -0.97
SYDE2-201ENST00000234668 MUS81Q96NY9 551 aa9□□□□□ -0.97
SYDE2-201ENST00000234668 POPDC3Q9HBV1 291 aa9□□□□□ -0.97
SYDE2-201ENST00000234668 ETAA1Q9NY74 926 aa9□□□□□ -0.97
SYDE2-201ENST00000234668 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9□□□□□ -0.97
SYDE2-201ENST00000234668 PIKFYVEQ9Y2I7 2098 aa9□□□□□ -0.97
SYDE2-201ENST00000234668 COL4A4P53420 1690 aaPredicted RBP9□□□□□ -0.97
SYDE2-201ENST00000234668 SEC22BO75396 215 aa8.99□□□□□ -0.97
SYDE2-201ENST00000234668 PARNO95453 639 aaKnown RBP8.99□□□□□ -0.97
SYDE2-201ENST00000234668 LDLRP01130 860 aa8.99□□□□□ -0.97
SYDE2-201ENST00000234668 INHAP05111 366 aa8.99□□□□□ -0.97
SYDE2-201ENST00000234668 PRR35P0CG20 571 aa8.99□□□□□ -0.97
SYDE2-201ENST00000234668 CST5P28325 142 aaPredicted RBP8.99□□□□□ -0.97
SYDE2-201ENST00000234668 HNF1BP35680 557 aa8.99□□□□□ -0.97
SYDE2-201ENST00000234668 TM4SF4P48230 202 aa8.99□□□□□ -0.97
SYDE2-201ENST00000234668 RPS6KA3P51812 740 aa8.99□□□□□ -0.97
SYDE2-201ENST00000234668 KPNA1P52294 538 aaPredicted RBP8.99□□□□□ -0.97
SYDE2-201ENST00000234668 NKG7Q16617 165 aa8.99□□□□□ -0.97
SYDE2-201ENST00000234668 CLEC4FQ8N1N0 589 aa8.99□□□□□ -0.97
SYDE2-201ENST00000234668 DHRSXQ8N5I4 330 aa8.99□□□□□ -0.97
SYDE2-201ENST00000234668 ABTB1Q969K4 478 aaPredicted RBP8.99□□□□□ -0.97
SYDE2-201ENST00000234668 ERLEC1Q96DZ1 483 aa8.99□□□□□ -0.97
SYDE2-201ENST00000234668 NSMCE2Q96MF7 247 aa8.99□□□□□ -0.97
SYDE2-201ENST00000234668 HAUS8Q9BT25 410 aa8.99□□□□□ -0.97
SYDE2-201ENST00000234668 TRIM15Q9C019 465 aa8.99□□□□□ -0.97
SYDE2-201ENST00000234668 POLR1BQ9H9Y6 1135 aa8.99□□□□□ -0.97
SYDE2-201ENST00000234668 ZFYVE1Q9HBF4 777 aa8.99□□□□□ -0.97
SYDE2-201ENST00000234668 WWOXQ9NZC7 414 aa8.99□□□□□ -0.97
SYDE2-201ENST00000234668 LIMD1Q9UGP4 676 aa8.99□□□□□ -0.97
SYDE2-201ENST00000234668 VPS4AQ9UN37 437 aa8.99□□□□□ -0.97
SYDE2-201ENST00000234668 DHRS7Q9Y394 339 aa8.99□□□□□ -0.97
SYDE2-201ENST00000234668 H7C4K7 107 aa8.99□□□□□ -0.97
SYDE2-201ENST00000234668 STX16O14662 325 aa8.99□□□□□ -0.97
SYDE2-201ENST00000234668 LSM1O15116 133 aaKnown RBP8.99□□□□□ -0.97
SYDE2-201ENST00000234668 MAN1A2O60476 641 aa8.99□□□□□ -0.97
SYDE2-201ENST00000234668 EEDO75530 441 aaKnown RBP8.99□□□□□ -0.97
SYDE2-201ENST00000234668 PAX3P23760 479 aa8.99□□□□□ -0.97
SYDE2-201ENST00000234668 POLR2IP36954 125 aaKnown RBP8.99□□□□□ -0.97
SYDE2-201ENST00000234668 PTGER3P43115 390 aa8.99□□□□□ -0.97
SYDE2-201ENST00000234668 RPS9P46781 194 aaKnown RBP8.99□□□□□ -0.97
SYDE2-201ENST00000234668 BNIP2Q12982 314 aa8.99□□□□□ -0.97
SYDE2-201ENST00000234668 ATP6AP1Q15904 470 aa8.99□□□□□ -0.97
SYDE2-201ENST00000234668 POM121L1PQ3SYA9 428 aa8.99□□□□□ -0.97
SYDE2-201ENST00000234668 CYBRD1Q53TN4 286 aa8.99□□□□□ -0.97
SYDE2-201ENST00000234668 PRMT9Q6P2P2 845 aa8.99□□□□□ -0.97
SYDE2-201ENST00000234668 GCNT7Q6ZNI0 430 aa8.99□□□□□ -0.97
SYDE2-201ENST00000234668 TMEM26Q6ZUK4 368 aa8.99□□□□□ -0.97
SYDE2-201ENST00000234668 NPAS4Q8IUM7 802 aa8.99□□□□□ -0.97
SYDE2-201ENST00000234668 HID1Q8IV36 788 aa8.99□□□□□ -0.97
SYDE2-201ENST00000234668 EZH1Q92800 747 aaPredicted RBP8.99□□□□□ -0.97
SYDE2-201ENST00000234668 KCNJ9Q92806 393 aa8.99□□□□□ -0.97
SYDE2-201ENST00000234668 PEX13Q92968 403 aa8.99□□□□□ -0.97
SYDE2-201ENST00000234668 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.99□□□□□ -0.97
SYDE2-201ENST00000234668 HSPBAP1Q96EW2 488 aa8.99□□□□□ -0.97
SYDE2-201ENST00000234668 CGREF1Q99674 301 aa8.99□□□□□ -0.97
SYDE2-201ENST00000234668 BEGAINQ9BUH8 593 aa8.99□□□□□ -0.97
SYDE2-201ENST00000234668 EPB41L1Q9H4G0 881 aa8.99□□□□□ -0.97
SYDE2-201ENST00000234668 ZNF334Q9HCZ1 680 aaPredicted RBP8.99□□□□□ -0.97
SYDE2-201ENST00000234668 RIC8BQ9NVN3 520 aa8.99□□□□□ -0.97
SYDE2-201ENST00000234668 RHBDL2Q9NX52 303 aa8.99□□□□□ -0.97
SYDE2-201ENST00000234668 ARIH1Q9Y4X5 557 aaPredicted RBP8.99□□□□□ -0.97
SYDE2-201ENST00000234668 CPQQ9Y646 472 aa8.99□□□□□ -0.97
SYDE2-201ENST00000234668 ANKRD36A6QL64 1941 aa8.99□□□□□ -0.97
SYDE2-201ENST00000234668 FAM234BA2RU67 622 aa8.99□□□□□ -0.97
SYDE2-201ENST00000234668 GAPDHSO14556 408 aaPredicted RBP8.99□□□□□ -0.97
SYDE2-201ENST00000234668 RPLP2P05387 115 aaKnown RBP8.99□□□□□ -0.97
SYDE2-201ENST00000234668 TFPTP0C1Z6 253 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms