RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 FIBCD1Q8N539 461 aa13.21□□□□□ -0.29
NEK4-201ENST00000233027 TBC1D3DA0A087WVF3 549 aa13.21□□□□□ -0.29
NEK4-201ENST00000233027 TBC1D3IA0A087WXS9 549 aa13.21□□□□□ -0.29
NEK4-201ENST00000233027 TBC1D3EA0A087X179 549 aa13.21□□□□□ -0.29
NEK4-201ENST00000233027 TBC1D3KA0A087X1G2 549 aa13.21□□□□□ -0.29
NEK4-201ENST00000233027 TBC1D3FA6NER0 549 aaPredicted RBP13.21□□□□□ -0.29
NEK4-201ENST00000233027 TBC1D3LB9A6J9 549 aa13.21□□□□□ -0.29
NEK4-201ENST00000233027 TBC1D3HP0C7X1 549 aa13.21□□□□□ -0.29
NEK4-201ENST00000233027 GNA12Q03113 381 aa13.21□□□□□ -0.29
NEK4-201ENST00000233027 TBC1D3GQ6DHY5 549 aa13.21□□□□□ -0.29
NEK4-201ENST00000233027 TBC1D3CQ6IPX1 549 aa13.21□□□□□ -0.29
NEK4-201ENST00000233027 CHST9Q7L1S5 443 aa13.21□□□□□ -0.29
NEK4-201ENST00000233027 TBC1D3Q8IZP1 549 aaPredicted RBP13.21□□□□□ -0.29
NEK4-201ENST00000233027 IRGQQ8WZA9 623 aa13.21□□□□□ -0.29
NEK4-201ENST00000233027 RELTQ969Z4 430 aa13.21□□□□□ -0.29
NEK4-201ENST00000233027 KLRG1Q96E93 195 aa13.21□□□□□ -0.29
NEK4-201ENST00000233027 C1QTNF1Q9BXJ1 281 aa13.21□□□□□ -0.29
NEK4-201ENST00000233027 FBXW2Q9UKT8 454 aa13.21□□□□□ -0.29
NEK4-201ENST00000233027 MYBPHLA2RUH7 354 aa13.21□□□□□ -0.3
NEK4-201ENST00000233027 EI24O14681 340 aa13.21□□□□□ -0.3
NEK4-201ENST00000233027 SLC30A4O14863 429 aa13.21□□□□□ -0.3
NEK4-201ENST00000233027 CDK14O94921 469 aa13.21□□□□□ -0.3
NEK4-201ENST00000233027 NT5EP21589 574 aa13.21□□□□□ -0.3
NEK4-201ENST00000233027 IL1R2P27930 398 aa13.21□□□□□ -0.3
NEK4-201ENST00000233027 ZNF155Q12901 538 aaPredicted RBP13.21□□□□□ -0.3
NEK4-201ENST00000233027 GANABQ14697 944 aaKnown RBP13.21□□□□□ -0.3
NEK4-201ENST00000233027 BEND5Q7L4P6 421 aa13.21□□□□□ -0.3
NEK4-201ENST00000233027 NAT8LQ8N9F0 302 aa13.21□□□□□ -0.3
NEK4-201ENST00000233027 FAM110BQ8TC76 370 aa13.21□□□□□ -0.3
NEK4-201ENST00000233027 TAMM41Q96BW9 452 aa13.21□□□□□ -0.3
NEK4-201ENST00000233027 ZNF395Q9H8N7 513 aaPredicted RBP13.21□□□□□ -0.3
NEK4-201ENST00000233027 CCDC59Q9P031 241 aaKnown RBP13.21□□□□□ -0.3
NEK4-201ENST00000233027 SAP18O00422 153 aaKnown RBP13.21□□□□□ -0.3
NEK4-201ENST00000233027 FAM46CQ5VWP2 391 aa13.21□□□□□ -0.3
NEK4-201ENST00000233027 SMARCD3Q6STE5 483 aa13.21□□□□□ -0.3
NEK4-201ENST00000233027 ZNF572Q7Z3I7 529 aaPredicted RBP13.21□□□□□ -0.3
NEK4-201ENST00000233027 OR8H1Q8NGG4 311 aa13.21□□□□□ -0.3
NEK4-201ENST00000233027 CLEC4DQ8WXI8 215 aa13.21□□□□□ -0.3
NEK4-201ENST00000233027 ZNF516Q92618 1163 aa13.21□□□□□ -0.3
NEK4-201ENST00000233027 PIWIL1Q96J94 861 aaKnown RBP13.21□□□□□ -0.3
NEK4-201ENST00000233027 EXO5Q9H790 373 aa13.21□□□□□ -0.3
NEK4-201ENST00000233027 TRPV5Q9NQA5 729 aa13.21□□□□□ -0.3
NEK4-201ENST00000233027 PTTG2Q9NZH5 202 aa13.21□□□□□ -0.3
NEK4-201ENST00000233027 ZNF510Q9Y2H8 683 aa13.21□□□□□ -0.3
NEK4-201ENST00000233027 A0A075B6Q4 140 aa13.2□□□□□ -0.3
NEK4-201ENST00000233027 ARL5CA6NH57 179 aa13.2□□□□□ -0.3
NEK4-201ENST00000233027 ZNF99A8MXY4 864 aaPredicted RBP13.2□□□□□ -0.3
NEK4-201ENST00000233027 L1CAMP32004 1257 aa13.2□□□□□ -0.3
NEK4-201ENST00000233027 MNDAP41218 407 aa13.2□□□□□ -0.3
NEK4-201ENST00000233027 ARFIP1P53367 373 aa13.2□□□□□ -0.3
NEK4-201ENST00000233027 GRB14Q14449 540 aa13.2□□□□□ -0.3
NEK4-201ENST00000233027 ATXN7L2Q5T6C5 722 aaPredicted RBP13.2□□□□□ -0.3
NEK4-201ENST00000233027 KLHDC10Q6PID8 442 aa13.2□□□□□ -0.3
NEK4-201ENST00000233027 C11orf65Q8NCR3 313 aa13.2□□□□□ -0.3
NEK4-201ENST00000233027 MED28Q9H204 178 aa13.2□□□□□ -0.3
NEK4-201ENST00000233027 RMI1Q9H9A7 625 aa13.2□□□□□ -0.3
NEK4-201ENST00000233027 GTF2IRD1Q9UHL9 959 aa13.2□□□□□ -0.3
NEK4-201ENST00000233027 PDLIM1O00151 329 aa13.2□□□□□ -0.3
NEK4-201ENST00000233027 CACNB4O00305 520 aaPredicted RBP13.2□□□□□ -0.3
NEK4-201ENST00000233027 DNAJA2O60884 412 aa13.2□□□□□ -0.3
NEK4-201ENST00000233027 BCAP31P51572 246 aa13.2□□□□□ -0.3
NEK4-201ENST00000233027 MAPK12P53778 367 aa13.2□□□□□ -0.3
NEK4-201ENST00000233027 BNC1Q01954 994 aa13.2□□□□□ -0.3
NEK4-201ENST00000233027 DUSP28Q4G0W2 176 aa13.2□□□□□ -0.3
NEK4-201ENST00000233027 TXNRD3NBQ6F5E7 133 aa13.2□□□□□ -0.3
NEK4-201ENST00000233027 GPR153Q6NV75 609 aa13.2□□□□□ -0.3
NEK4-201ENST00000233027 FRMD7Q6ZUT3 714 aa13.2□□□□□ -0.3
NEK4-201ENST00000233027 NEK7Q8TDX7 302 aa13.2□□□□□ -0.3
NEK4-201ENST00000233027 HNRNPABQ99729 332 aaKnown RBP13.2□□□□□ -0.3
NEK4-201ENST00000233027 GPN1Q9HCN4 374 aaPredicted RBP13.2□□□□□ -0.3
NEK4-201ENST00000233027 ZNF224Q9NZL3 707 aa13.2□□□□□ -0.3
NEK4-201ENST00000233027 SLC7A8Q9UHI5 535 aa13.2□□□□□ -0.3
NEK4-201ENST00000233027 CLDN25C9JDP6 229 aa13.2□□□□□ -0.3
NEK4-201ENST00000233027 SNX4O95219 450 aa13.2□□□□□ -0.3
NEK4-201ENST00000233027 H6PDO95479 791 aa13.2□□□□□ -0.3
NEK4-201ENST00000233027 TM4SF1P30408 202 aa13.2□□□□□ -0.3
NEK4-201ENST00000233027 RAB25P57735 213 aa13.2□□□□□ -0.3
NEK4-201ENST00000233027 ASTE1Q2TB18 679 aaPredicted RBP13.2□□□□□ -0.3
NEK4-201ENST00000233027 ZDHHC20Q5W0Z9 365 aa13.2□□□□□ -0.3
NEK4-201ENST00000233027 FAM91A1Q658Y4 838 aa13.2□□□□□ -0.3
NEK4-201ENST00000233027 LEMD2Q8NC56 503 aa13.2□□□□□ -0.3
NEK4-201ENST00000233027 SKA1Q96BD8 255 aa13.2□□□□□ -0.3
NEK4-201ENST00000233027 INTS10Q9NVR2 710 aaKnown RBP13.2□□□□□ -0.3
NEK4-201ENST00000233027 PPM1HQ9ULR3 514 aa13.2□□□□□ -0.3
NEK4-201ENST00000233027 PADI3Q9ULW8 664 aa13.2□□□□□ -0.3
NEK4-201ENST00000233027 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.2□□□□□ -0.3
NEK4-201ENST00000233027 TMEM233B4DJY2 109 aa13.2□□□□□ -0.3
NEK4-201ENST00000233027 FAUP35544 74 aaKnown RBP13.2□□□□□ -0.3
NEK4-201ENST00000233027 PDE12Q6L8Q7 609 aaKnown RBP13.2□□□□□ -0.3
NEK4-201ENST00000233027 ZNF613Q6PF04 617 aa13.2□□□□□ -0.3
NEK4-201ENST00000233027 DRICH1Q6PGQ1 229 aaPredicted RBP13.2□□□□□ -0.3
NEK4-201ENST00000233027 FRRS1Q6ZNA5 592 aa13.2□□□□□ -0.3
NEK4-201ENST00000233027 USP30Q70CQ3 517 aa13.2□□□□□ -0.3
NEK4-201ENST00000233027 ZZZ3Q8IYH5 903 aa13.2□□□□□ -0.3
NEK4-201ENST00000233027 SPPL2BQ8TCT7 592 aa13.2□□□□□ -0.3
NEK4-201ENST00000233027 NSMCE3Q96MG7 304 aa13.2□□□□□ -0.3
NEK4-201ENST00000233027 ST6GALNAC4Q9H4F1 302 aa13.2□□□□□ -0.3
NEK4-201ENST00000233027 DMAC2Q9NW81 257 aa13.2□□□□□ -0.3
NEK4-201ENST00000233027 SAGE2PA6NJ88 616 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 ZNF879B4DU55 563 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms