RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 MKKSQ9NPJ1 570 aaPredicted RBP10.42□□□□□ -0.74
TRPS1-201ENST00000220888 GKN1Q9NS71 199 aa10.42□□□□□ -0.74
TRPS1-201ENST00000220888 ADGRE2Q9UHX3 823 aa10.42□□□□□ -0.74
TRPS1-201ENST00000220888 SPIN1Q9Y657 262 aaPredicted RBP10.42□□□□□ -0.74
TRPS1-201ENST00000220888 ICAM3P32942 547 aa10.42□□□□□ -0.74
TRPS1-201ENST00000220888 CASP7P55210 303 aa10.42□□□□□ -0.74
TRPS1-201ENST00000220888 QPRTQ15274 297 aa10.42□□□□□ -0.74
TRPS1-201ENST00000220888 CCL14Q16627 93 aa10.42□□□□□ -0.74
TRPS1-201ENST00000220888 LRRC73Q5JTD7 316 aa10.42□□□□□ -0.74
TRPS1-201ENST00000220888 AADACL2Q6P093 401 aa10.42□□□□□ -0.74
TRPS1-201ENST00000220888 KCTD15Q96SI1 283 aaPredicted RBP10.42□□□□□ -0.74
TRPS1-201ENST00000220888 TLR10Q9BXR5 811 aa10.42□□□□□ -0.74
TRPS1-201ENST00000220888 REREQ9P2R6 1566 aa10.42□□□□□ -0.74
TRPS1-201ENST00000220888 TEX46H3BTG2 121 aa10.42□□□□□ -0.74
TRPS1-201ENST00000220888 PDPK1O15530 556 aa10.42□□□□□ -0.74
TRPS1-201ENST00000220888 MFSD11O43934 449 aa10.42□□□□□ -0.74
TRPS1-201ENST00000220888 SNX4O95219 450 aa10.42□□□□□ -0.74
TRPS1-201ENST00000220888 UGT1A1P22309 533 aa10.42□□□□□ -0.74
TRPS1-201ENST00000220888 EPHA3P29320 983 aa10.42□□□□□ -0.74
TRPS1-201ENST00000220888 SLC6A9P48067 706 aa10.42□□□□□ -0.74
TRPS1-201ENST00000220888 SWI5Q1ZZU3 235 aa10.42□□□□□ -0.74
TRPS1-201ENST00000220888 ITPRIPL2Q3MIP1 535 aa10.42□□□□□ -0.74
TRPS1-201ENST00000220888 KBTBD2Q8IY47 623 aa10.42□□□□□ -0.74
TRPS1-201ENST00000220888 ZBED6CLQ96FA7 236 aaPredicted RBP10.42□□□□□ -0.74
TRPS1-201ENST00000220888 MIPEPQ99797 713 aa10.42□□□□□ -0.74
TRPS1-201ENST00000220888 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.42□□□□□ -0.74
TRPS1-201ENST00000220888 DKKL1Q9UK85 242 aa10.42□□□□□ -0.74
TRPS1-201ENST00000220888 FAM237BA0A1B0GVD1 139 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 CCDC182A6NF36 153 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 MATN3O15232 486 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 CBX6O95503 412 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 CHRNA1P02708 482 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 CCR8P51685 355 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 CACNA2D1P54289 1103 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 TSPAN5P62079 268 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 ZNF311Q5JNZ3 666 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 ABRAXAS1Q6UWZ7 409 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 CDH24Q86UP0 819 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 LRRTM4Q86VH4 590 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 C11orf65Q8NCR3 313 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 OMA1Q96E52 524 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 C1GALT1C1Q96EU7 318 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 ZSWIM3Q96MP5 696 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 GBA3Q9H227 469 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 ZNF222Q9UK12 451 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 SNX7Q9UNH6 387 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 BBIP1A8MTZ0 92 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 ESR1P03372 595 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 SLURP2P0DP57 97 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 MPIP34949 423 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 PTGER3P43115 390 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 SEPHS1P49903 392 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 HSF2Q03933 536 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 GTF2H2Q13888 395 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 PUM1Q14671 1186 aaKnown RBP eCLIP10.41□□□□□ -0.74
TRPS1-201ENST00000220888 PTPN20Q4JDL3 420 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 NT5DC1Q5TFE4 455 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 GTF2H2CQ6P1K8 395 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 GRASPQ7Z6J2 395 aaPredicted RBP10.41□□□□□ -0.74
TRPS1-201ENST00000220888 OR2L3Q8NG85 312 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 C1orf216Q8TAB5 229 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 PGM2Q96G03 612 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 SUV39H2Q9H5I1 410 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 FKBPLQ9UIM3 349 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 KDM4FA0A1W2PPD8 638 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 A0A1W2PQ45 241 aaPredicted RBP10.41□□□□□ -0.74
TRPS1-201ENST00000220888 A0A1W2PQY0 241 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 MYBPHLA2RUH7 354 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 FADS2P1A8MWK0 482 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 PSMD9O00233 223 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 SEMA3DO95025 777 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 CCNE2O96020 404 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 CYP4B1P13584 511 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 FOSL2P15408 326 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 ZNF20P17024 532 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 TTKP33981 857 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 RFTN1Q14699 578 aaPredicted RBP10.41□□□□□ -0.74
TRPS1-201ENST00000220888 PDK4Q16654 411 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 SPDYCQ5MJ68 293 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 NAIF1Q69YI7 327 aaPredicted RBP10.41□□□□□ -0.74
TRPS1-201ENST00000220888 PGBD2Q6P3X8 592 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 HSDL2Q6YN16 418 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 SLC26A9Q7LBE3 791 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 PTF1AQ7RTS3 328 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 XYLT1Q86Y38 959 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 LRRC17Q8N6Y2 441 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 FAM124BQ9H5Z6 455 aaPredicted RBP10.41□□□□□ -0.74
TRPS1-201ENST00000220888 L1RE1Q9UN81 338 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 LMTK2Q8IWU2 1503 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 PIK3C2BO00750 1634 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 A0A075B6Q4 140 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 DHRS12A0PJE2 317 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 MUSKO15146 869 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 ZMPSTE24O75844 475 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 PGM3O95394 542 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 PDHA2P29803 388 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 GRM2Q14416 872 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 NYAP1Q6ZVC0 841 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 FBXL16Q8N461 479 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 SFRP1Q8N474 314 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms