RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 CRHBPP24387 322 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 NFKBIAP25963 317 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 SHMT2P34897 504 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 ATP5C1P36542 298 aaKnown RBP13.1□□□□□ -0.31
SRP54-201ENST00000216774 DGKQP52824 942 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 RPS24P62847 133 aaKnown RBP13.1□□□□□ -0.31
SRP54-201ENST00000216774 CACNG1Q06432 222 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 MAD2L1Q13257 205 aaPredicted RBP13.1□□□□□ -0.31
SRP54-201ENST00000216774 ABRAXAS2Q15018 415 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 SKIV2LQ15477 1246 aaKnown RBP13.1□□□□□ -0.31
SRP54-201ENST00000216774 ZIK1Q3SY52 487 aaPredicted RBP13.1□□□□□ -0.31
SRP54-201ENST00000216774 SBSNQ6UWP8 590 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 CHST9Q7L1S5 443 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 CHST15Q7LFX5 561 aaPredicted RBP13.1□□□□□ -0.31
SRP54-201ENST00000216774 SVOPLQ8N434 492 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 EFHBQ8N7U6 833 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 OR2T12Q8NG77 320 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 SLC13A3Q8WWT9 602 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 TRIB2Q92519 343 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 ITFG2Q969R8 447 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 ACDQ96AP0 544 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 SMIM14Q96QK8 99 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 C17orf80Q9BSJ5 609 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 PAIP1Q9H074 479 aaKnown RBP13.1□□□□□ -0.31
SRP54-201ENST00000216774 USE1Q9NZ43 259 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 AP3M1Q9Y2T2 418 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 ZNF711Q9Y462 761 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 SLC30A1Q9Y6M5 507 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 VWA8A3KMH1 1905 aa13.09□□□□□ -0.31
SRP54-201ENST00000216774 PRMT5O14744 637 aaPredicted RBP13.09□□□□□ -0.31
SRP54-201ENST00000216774 RAD51BO15315 384 aa13.09□□□□□ -0.31
SRP54-201ENST00000216774 VNN2O95498 520 aa13.09□□□□□ -0.31
SRP54-201ENST00000216774 HNRNPCP07910 306 aaKnown RBP eCLIP13.09□□□□□ -0.315e-7■■■□□ 16.2
SRP54-201ENST00000216774 HOXB6P17509 224 aaKnown RBP13.09□□□□□ -0.31
SRP54-201ENST00000216774 CD247P20963 164 aa13.09□□□□□ -0.31
SRP54-201ENST00000216774 MATN1P21941 496 aa13.09□□□□□ -0.31
SRP54-201ENST00000216774 MAP4P27816 1152 aaKnown RBP13.09□□□□□ -0.31
SRP54-201ENST00000216774 GSTM2P28161 218 aa13.09□□□□□ -0.31
SRP54-201ENST00000216774 AKT1P31749 480 aa13.09□□□□□ -0.31
SRP54-201ENST00000216774 TRAF3Q13114 568 aa13.09□□□□□ -0.31
SRP54-201ENST00000216774 RFTN2Q52LD8 501 aaPredicted RBP13.09□□□□□ -0.31
SRP54-201ENST00000216774 XAF1Q6GPH4 301 aa13.09□□□□□ -0.31
SRP54-201ENST00000216774 CERS6Q6ZMG9 384 aa13.09□□□□□ -0.31
SRP54-201ENST00000216774 RNF19BQ6ZMZ0 732 aa13.09□□□□□ -0.31
SRP54-201ENST00000216774 TAS2R42Q7RTR8 314 aa13.09□□□□□ -0.31
SRP54-201ENST00000216774 GLB1L3Q8NCI6 653 aaPredicted RBP13.09□□□□□ -0.31
SRP54-201ENST00000216774 ZNF548Q8NEK5 533 aaPredicted RBP13.09□□□□□ -0.31
SRP54-201ENST00000216774 PJA1Q8NG27 643 aa13.09□□□□□ -0.31
SRP54-201ENST00000216774 GIPC2Q8TF65 315 aa13.09□□□□□ -0.31
SRP54-201ENST00000216774 C2orf15Q8WU43 125 aaKnown RBP13.09□□□□□ -0.31
SRP54-201ENST00000216774 LINC01599Q8WXQ3 324 aa13.09□□□□□ -0.31
SRP54-201ENST00000216774 SH3GL1Q99961 368 aa13.09□□□□□ -0.31
SRP54-201ENST00000216774 FEM1AQ9BSK4 669 aa13.09□□□□□ -0.31
SRP54-201ENST00000216774 TTLL2Q9BWV7 592 aa13.09□□□□□ -0.31
SRP54-201ENST00000216774 TOR3AQ9H497 397 aa13.09□□□□□ -0.31
SRP54-201ENST00000216774 GPN2Q9H9Y4 310 aaPredicted RBP13.09□□□□□ -0.31
SRP54-201ENST00000216774 BPIFA1Q9NP55 256 aa13.09□□□□□ -0.31
SRP54-201ENST00000216774 EIF3LQ9Y262 564 aaKnown RBP13.09□□□□□ -0.31
SRP54-201ENST00000216774 CCL27Q9Y4X3 112 aa13.09□□□□□ -0.31
SRP54-201ENST00000216774 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.09□□□□□ -0.31
SRP54-201ENST00000216774 CBX4O00257 560 aa13.09□□□□□ -0.31
SRP54-201ENST00000216774 GSTA4O15217 222 aa13.09□□□□□ -0.31
SRP54-201ENST00000216774 FFAR2O15552 330 aa13.09□□□□□ -0.31
SRP54-201ENST00000216774 GLUD1P00367 558 aa13.09□□□□□ -0.31
SRP54-201ENST00000216774 CNPP09543 421 aaKnown RBP13.09□□□□□ -0.31
SRP54-201ENST00000216774 UGT1A1P22309 533 aa13.09□□□□□ -0.31
SRP54-201ENST00000216774 UGT1A4P22310 534 aa13.09□□□□□ -0.31
SRP54-201ENST00000216774 UGT1A3P35503 534 aa13.09□□□□□ -0.31
SRP54-201ENST00000216774 UGT1A5P35504 534 aa13.09□□□□□ -0.31
SRP54-201ENST00000216774 C21orf59P57076 290 aa13.09□□□□□ -0.31
SRP54-201ENST00000216774 GABARAPL2P60520 117 aa13.09□□□□□ -0.31
SRP54-201ENST00000216774 ZNF177Q13360 481 aaPredicted RBP13.09□□□□□ -0.31
SRP54-201ENST00000216774 SULT1C3Q6IMI6 304 aa13.09□□□□□ -0.31
SRP54-201ENST00000216774 CCSAPQ6IQ19 270 aaPredicted RBP13.09□□□□□ -0.31
SRP54-201ENST00000216774 NECAB2Q7Z6G3 386 aa13.09□□□□□ -0.31
SRP54-201ENST00000216774 HOMEZQ8IX15 550 aa13.09□□□□□ -0.31
SRP54-201ENST00000216774 GIPC3Q8TF64 312 aa13.09□□□□□ -0.31
SRP54-201ENST00000216774 POP5Q969H6 163 aaKnown RBP13.09□□□□□ -0.31
SRP54-201ENST00000216774 OSBPL10Q9BXB5 764 aa13.09□□□□□ -0.31
SRP54-201ENST00000216774 IPPKQ9H8X2 491 aa13.09□□□□□ -0.31
SRP54-201ENST00000216774 FAM118AQ9NWS6 357 aa13.09□□□□□ -0.31
SRP54-201ENST00000216774 VAPAQ9P0L0 249 aa13.09□□□□□ -0.31
SRP54-201ENST00000216774 BLOC1S6Q9UL45 172 aa13.09□□□□□ -0.31
SRP54-201ENST00000216774 PKP3Q9Y446 797 aa13.09□□□□□ -0.31
SRP54-201ENST00000216774 SLC38A8A6NNN8 435 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 B4GAT1O43505 415 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 RGS14O43566 566 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 TBC1D4O60343 1298 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 RSL1D1O76021 490 aaKnown RBP13.08□□□□□ -0.32
SRP54-201ENST00000216774 PCNAP12004 261 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 IMPDH2P12268 514 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 CTGFP29279 349 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 PPP2R2BQ00005 443 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 TRAF2Q12933 501 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 BNIP3Q12983 259 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 MILR1Q7Z6M3 343 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 DDHD1Q8NEL9 900 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 ZNF555Q8NEP9 628 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 FIG4Q92562 907 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 GTF2H4Q92759 462 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms