RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 TMCO6Q96DC7 493 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 MUCL1Q96DR8 90 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 ZNF224Q9NZL3 707 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 TGM6O95932 706 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 TMEM198Q66K66 360 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 SMARCD3Q6STE5 483 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 PIAS4Q8N2W9 510 aaPredicted RBP3.41□□□□□ -1.86
NEB-201ENST00000172853 ZNF454Q8N9F8 522 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 C2orf15Q8WU43 125 aaKnown RBP3.41□□□□□ -1.86
NEB-201ENST00000172853 TTYH3Q9C0H2 523 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 GBA3Q9H227 469 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 MLXIPLQ9NP71 852 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 C2CD2Q9Y426 696 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 TIAM1Q13009 1591 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 hCG_1807616A0A1W2PRN6 198 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 KRT36O76013 467 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 TIE1P35590 1138 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 MAGEA4P43358 317 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 OAZ1P54368 228 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 MGAT5Q09328 741 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 NAE1Q13564 534 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 DSC3Q14574 896 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 AARDQ4LEZ3 155 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 ACSM3Q53FZ2 586 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 PAPD5Q8NDF8 572 aaKnown RBP3.41□□□□□ -1.86
NEB-201ENST00000172853 S100ZQ8WXG8 99 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 EDEM1Q92611 657 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 KCNN1Q92952 543 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 TATDN2Q93075 761 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 TIMD4Q96H15 378 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 IER2Q9BTL4 223 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 PIF1Q9H611 641 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 EFCAB7A8K855 629 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 FLRT2O43155 660 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 PPP3CAQ08209 521 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 TROAPQ12815 778 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 RABL6Q3YEC7 729 aaPredicted RBP3.41□□□□□ -1.86
NEB-201ENST00000172853 FAM76BQ5HYJ3 339 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 DNAJB7Q7Z6W7 309 aaPredicted RBP3.41□□□□□ -1.86
NEB-201ENST00000172853 SPATA20Q8TB22 786 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 GDAP2Q9NXN4 497 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 CFAP97Q9P2B7 532 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 MARCOQ9UEW3 520 aaPredicted RBP3.41□□□□□ -1.86
NEB-201ENST00000172853 PITPNM1O00562 1244 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 ZBTB7BO15156 539 aaPredicted RBP3.41□□□□□ -1.86
NEB-201ENST00000172853 PDPK1O15530 556 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 GLRBP48167 497 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 FMO5P49326 533 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 CDH11P55287 796 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 CDC42EP5Q6NZY7 148 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 TRPV1Q8NER1 839 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 SLC35G2Q8TBE7 412 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 TMEM234Q8WY98 164 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 RBP7Q96R05 134 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 DNTTIP1Q9H147 329 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 SGK2Q9HBY8 427 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 ACTR3BQ9P1U1 418 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 A8MUA0 341 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 MAP2K7O14733 419 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 SLC16A8O95907 504 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 RFC2P35250 354 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 FXR1P51114 621 aaKnown RBP eCLIP3.41□□□□□ -1.86
NEB-201ENST00000172853 SLC14A2Q15849 920 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 ADGRF1Q5T601 910 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 TPRA1Q86W33 373 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 OR8S1Q8NH09 359 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 BSCL2Q96G97 398 aaPredicted RBP3.41□□□□□ -1.86
NEB-201ENST00000172853 VCPIP1Q96JH7 1222 aa3.41□□□□□ -1.86
NEB-201ENST00000172853 FARSBQ9NSD9 589 aaKnown RBP3.41□□□□□ -1.86
NEB-201ENST00000172853 C1orf232A0A0U1RR37 186 aa3.4□□□□□ -1.86
NEB-201ENST00000172853 HMX3A6NHT5 357 aa3.4□□□□□ -1.86
NEB-201ENST00000172853 NTRK1P04629 796 aa3.4□□□□□ -1.86
NEB-201ENST00000172853 ITGA5P08648 1049 aa3.4□□□□□ -1.86
NEB-201ENST00000172853 MTHFD2P13995 350 aa3.4□□□□□ -1.86
NEB-201ENST00000172853 PCDH1Q08174 1060 aa3.4□□□□□ -1.86
NEB-201ENST00000172853 RIPOR1Q6ZS17 1223 aa3.4□□□□□ -1.86
NEB-201ENST00000172853 TFAP2DQ7Z6R9 452 aa3.4□□□□□ -1.86
NEB-201ENST00000172853 ZCCHC10Q8TBK6 192 aa3.4□□□□□ -1.86
NEB-201ENST00000172853 SENP8Q96LD8 212 aa3.4□□□□□ -1.86
NEB-201ENST00000172853 RXFP1Q9HBX9 757 aa3.4□□□□□ -1.86
NEB-201ENST00000172853 TMEM184CQ9NVA4 438 aa3.4□□□□□ -1.86
NEB-201ENST00000172853 NPC1L1Q9UHC9 1359 aa3.4□□□□□ -1.86
NEB-201ENST00000172853 PLAGL2Q9UPG8 496 aa3.4□□□□□ -1.86
NEB-201ENST00000172853 PNPLA6Q8IY17 1366 aa3.4□□□□□ -1.86
NEB-201ENST00000172853 PNMA6EA0A0J9YXQ4 647 aa3.4□□□□□ -1.86
NEB-201ENST00000172853 LDB2O43679 373 aa3.4□□□□□ -1.86
NEB-201ENST00000172853 NDUFB10O96000 172 aa3.4□□□□□ -1.86
NEB-201ENST00000172853 IFNA1P01562 189 aa3.4□□□□□ -1.86
NEB-201ENST00000172853 ZNF286BP0CG31 522 aa3.4□□□□□ -1.86
NEB-201ENST00000172853 HOXB2P14652 356 aa3.4□□□□□ -1.86
NEB-201ENST00000172853 S100PP25815 95 aa3.4□□□□□ -1.86
NEB-201ENST00000172853 IL3RAP26951 378 aa3.4□□□□□ -1.86
NEB-201ENST00000172853 FMO3P31513 532 aa3.4□□□□□ -1.86
NEB-201ENST00000172853 USP46P62068 366 aa3.4□□□□□ -1.86
NEB-201ENST00000172853 LRRC14Q15048 493 aa3.4□□□□□ -1.86
NEB-201ENST00000172853 DHCR24Q15392 516 aa3.4□□□□□ -1.86
NEB-201ENST00000172853 ABHD17BQ5VST6 288 aa3.4□□□□□ -1.86
NEB-201ENST00000172853 FRMD7Q6ZUT3 714 aa3.4□□□□□ -1.86
NEB-201ENST00000172853 USP51Q70EK9 711 aa3.4□□□□□ -1.86
NEB-201ENST00000172853 IQCF1Q8N6M8 205 aa3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms