RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 PPP6CO00743 305 aa19.33■□□□□ 0.69
TNFRSF1A-201ENST00000162749 AP1G1O43747 822 aa19.33■□□□□ 0.69
TNFRSF1A-201ENST00000162749 SNX2O60749 519 aa19.33■□□□□ 0.69
TNFRSF1A-201ENST00000162749 ENO1P06733 434 aaKnown RBP19.33■□□□□ 0.69
TNFRSF1A-201ENST00000162749 SERPINA6P08185 405 aa19.33■□□□□ 0.69
TNFRSF1A-201ENST00000162749 DRD1P21728 446 aa19.33■□□□□ 0.69
TNFRSF1A-201ENST00000162749 GPR1P46091 355 aa19.33■□□□□ 0.69
TNFRSF1A-201ENST00000162749 SKIV2LQ15477 1246 aaKnown RBP19.33■□□□□ 0.69
TNFRSF1A-201ENST00000162749 SDE2Q6IQ49 451 aa19.33■□□□□ 0.69
TNFRSF1A-201ENST00000162749 FBXO27Q8NI29 283 aa19.33■□□□□ 0.69
TNFRSF1A-201ENST00000162749 TMCO1Q9UM00 188 aa19.33■□□□□ 0.69
TNFRSF1A-201ENST00000162749 C15orf41Q9Y2V0 281 aa19.33■□□□□ 0.69
TNFRSF1A-201ENST00000162749 EIF3FO00303 357 aaPredicted RBP19.33■□□□□ 0.68
TNFRSF1A-201ENST00000162749 FFAR2O15552 330 aa19.33■□□□□ 0.68
TNFRSF1A-201ENST00000162749 TSPAN6O43657 245 aa19.33■□□□□ 0.68
TNFRSF1A-201ENST00000162749 NARSO43776 548 aaKnown RBP19.33■□□□□ 0.68
TNFRSF1A-201ENST00000162749 ENO3P13929 434 aaPredicted RBP19.33■□□□□ 0.68
TNFRSF1A-201ENST00000162749 HOXB2P14652 356 aa19.33■□□□□ 0.68
TNFRSF1A-201ENST00000162749 SH3BP2P78314 561 aa19.33■□□□□ 0.68
TNFRSF1A-201ENST00000162749 GRSF1Q12849 480 aaKnown RBP eCLIP19.33■□□□□ 0.68
TNFRSF1A-201ENST00000162749 PDCD2Q16342 344 aaPredicted RBP19.33■□□□□ 0.68
TNFRSF1A-201ENST00000162749 PHKG1Q16816 387 aa19.33■□□□□ 0.68
TNFRSF1A-201ENST00000162749 TRIM74Q86UV6 250 aa19.33■□□□□ 0.68
TNFRSF1A-201ENST00000162749 NLRP8Q86W28 1048 aa19.33■□□□□ 0.68
TNFRSF1A-201ENST00000162749 ESAMQ96AP7 390 aa19.33■□□□□ 0.68
TNFRSF1A-201ENST00000162749 PPP1R36Q96LQ0 422 aa19.33■□□□□ 0.68
TNFRSF1A-201ENST00000162749 ASB1Q9Y576 335 aa19.33■□□□□ 0.68
TNFRSF1A-201ENST00000162749 QSOX1O00391 747 aa19.32■□□□□ 0.68
TNFRSF1A-201ENST00000162749 CDK14O94921 469 aa19.32■□□□□ 0.68
TNFRSF1A-201ENST00000162749 KLF8O95600 359 aaPredicted RBP19.32■□□□□ 0.68
TNFRSF1A-201ENST00000162749 COL9A1P20849 921 aa19.32■□□□□ 0.68
TNFRSF1A-201ENST00000162749 CLCQ05315 142 aa19.32■□□□□ 0.68
TNFRSF1A-201ENST00000162749 ANKS6Q68DC2 871 aa19.32■□□□□ 0.68
TNFRSF1A-201ENST00000162749 TLDC1Q6P9B6 456 aa19.32■□□□□ 0.68
TNFRSF1A-201ENST00000162749 VRK3Q8IV63 474 aa19.32■□□□□ 0.68
TNFRSF1A-201ENST00000162749 TEX9Q8N6V9 391 aa19.32■□□□□ 0.68
TNFRSF1A-201ENST00000162749 ASB2Q96Q27 587 aa19.32■□□□□ 0.68
TNFRSF1A-201ENST00000162749 OR52B2Q96RD2 323 aa19.32■□□□□ 0.68
TNFRSF1A-201ENST00000162749 SLC6A17Q9H1V8 727 aa19.32■□□□□ 0.68
TNFRSF1A-201ENST00000162749 WDR55Q9H6Y2 383 aaPredicted RBP19.32■□□□□ 0.68
TNFRSF1A-201ENST00000162749 CDYLQ9Y232 598 aa19.32■□□□□ 0.68
TNFRSF1A-201ENST00000162749 FIS1Q9Y3D6 152 aa19.32■□□□□ 0.68
TNFRSF1A-201ENST00000162749 OARD1Q9Y530 152 aa19.32■□□□□ 0.68
TNFRSF1A-201ENST00000162749 TMEM202A6NGA9 273 aa19.32■□□□□ 0.68
TNFRSF1A-201ENST00000162749 IGLON5A6NGN9 336 aa19.32■□□□□ 0.68
TNFRSF1A-201ENST00000162749 PRR5-ARHGAP8B1AHC4 643 aa19.32■□□□□ 0.68
TNFRSF1A-201ENST00000162749 KPNA5O15131 536 aa19.32■□□□□ 0.68
TNFRSF1A-201ENST00000162749 NUAK1O60285 661 aa19.32■□□□□ 0.68
TNFRSF1A-201ENST00000162749 RNASEH2AO75792 299 aaKnown RBP19.32■□□□□ 0.68
TNFRSF1A-201ENST00000162749 PCDH8O95206 1070 aa19.32■□□□□ 0.68
TNFRSF1A-201ENST00000162749 FTH1P02794 183 aa19.32■□□□□ 0.68
TNFRSF1A-201ENST00000162749 GNAZP19086 355 aa19.32■□□□□ 0.68
TNFRSF1A-201ENST00000162749 EPHA3P29320 983 aa19.32■□□□□ 0.68
TNFRSF1A-201ENST00000162749 PRLHRP49683 370 aa19.32■□□□□ 0.68
TNFRSF1A-201ENST00000162749 ARHGAP8P85298 464 aa19.32■□□□□ 0.68
TNFRSF1A-201ENST00000162749 UBAP2LQ14157 1087 aaKnown RBP19.32■□□□□ 0.68
TNFRSF1A-201ENST00000162749 PLEKHS1Q5SXH7 462 aa19.32■□□□□ 0.68
TNFRSF1A-201ENST00000162749 TMPRSS6Q8IU80 811 aa19.32■□□□□ 0.68
TNFRSF1A-201ENST00000162749 ENDOVQ8N8Q3 282 aaKnown RBP19.32■□□□□ 0.68
TNFRSF1A-201ENST00000162749 PDPRQ8NCN5 879 aa19.32■□□□□ 0.68
TNFRSF1A-201ENST00000162749 ELMO1Q92556 727 aa19.32■□□□□ 0.68
TNFRSF1A-201ENST00000162749 ZBTB26Q9HCK0 441 aa19.32■□□□□ 0.68
TNFRSF1A-201ENST00000162749 TCF7L2Q9NQB0 619 aa19.32■□□□□ 0.68
TNFRSF1A-201ENST00000162749 PCTPQ9UKL6 214 aa19.32■□□□□ 0.68
TNFRSF1A-201ENST00000162749 SHISA7A6NL88 538 aa19.31■□□□□ 0.68
TNFRSF1A-201ENST00000162749 B2RBV5 119 aa19.31■□□□□ 0.68
TNFRSF1A-201ENST00000162749 RAD51BO15315 384 aa19.31■□□□□ 0.68
TNFRSF1A-201ENST00000162749 TM7SF2O76062 418 aa19.31■□□□□ 0.68
TNFRSF1A-201ENST00000162749 LCP2Q13094 533 aa19.31■□□□□ 0.68
TNFRSF1A-201ENST00000162749 FAM219BQ5XKK7 198 aa19.31■□□□□ 0.68
TNFRSF1A-201ENST00000162749 TRPC4APQ8TEL6 797 aa19.31■□□□□ 0.68
TNFRSF1A-201ENST00000162749 SEMA4BQ9NPR2 832 aaPredicted RBP19.31■□□□□ 0.68
TNFRSF1A-201ENST00000162749 FBXL12Q9NXK8 326 aa19.31■□□□□ 0.68
TNFRSF1A-201ENST00000162749 TAGLN3Q9UI15 199 aa19.31■□□□□ 0.68
TNFRSF1A-201ENST00000162749 GOLGA8QA0A0J9YX86 632 aa19.31■□□□□ 0.68
TNFRSF1A-201ENST00000162749 A0A1B0GTL3 188 aa19.31■□□□□ 0.68
TNFRSF1A-201ENST00000162749 GOLGA8OA6NCC3 632 aa19.31■□□□□ 0.68
TNFRSF1A-201ENST00000162749 GOLGA8NF8WBI6 632 aa19.31■□□□□ 0.68
TNFRSF1A-201ENST00000162749 E2F3O00716 465 aa19.31■□□□□ 0.68
TNFRSF1A-201ENST00000162749 GPC4O75487 556 aa19.31■□□□□ 0.68
TNFRSF1A-201ENST00000162749 GUCA1CO95843 209 aa19.31■□□□□ 0.68
TNFRSF1A-201ENST00000162749 CLEC6AQ6EIG7 209 aa19.31■□□□□ 0.68
TNFRSF1A-201ENST00000162749 PLA2G15Q8NCC3 412 aa19.31■□□□□ 0.68
TNFRSF1A-201ENST00000162749 ZNF483Q8TF39 744 aaPredicted RBP19.31■□□□□ 0.68
TNFRSF1A-201ENST00000162749 ASZ1Q8WWH4 475 aa19.31■□□□□ 0.68
TNFRSF1A-201ENST00000162749 FAM131CQ96AQ9 280 aa19.31■□□□□ 0.68
TNFRSF1A-201ENST00000162749 FBRSQ9HAH7 460 aa19.31■□□□□ 0.68
TNFRSF1A-201ENST00000162749 MID1IP1Q9NPA3 183 aa19.31■□□□□ 0.68
TNFRSF1A-201ENST00000162749 EIF2B4Q9UI10 523 aaKnown RBP19.31■□□□□ 0.68
TNFRSF1A-201ENST00000162749 TRAF6Q9Y4K3 522 aa19.31■□□□□ 0.68
TNFRSF1A-201ENST00000162749 VCANP13611 3396 aa19.3■□□□□ 0.68
TNFRSF1A-201ENST00000162749 ATG13O75143 517 aa19.3■□□□□ 0.68
TNFRSF1A-201ENST00000162749 SKAP2O75563 359 aaPredicted RBP19.3■□□□□ 0.68
TNFRSF1A-201ENST00000162749 CCNG1P51959 295 aa19.3■□□□□ 0.68
TNFRSF1A-201ENST00000162749 TRMT11Q7Z4G4 463 aaKnown RBP19.3■□□□□ 0.68
TNFRSF1A-201ENST00000162749 RBM15BQ8NDT2 890 aaKnown RBP19.3■□□□□ 0.68
TNFRSF1A-201ENST00000162749 STON2Q8WXE9 905 aa19.3■□□□□ 0.68
TNFRSF1A-201ENST00000162749 MYCBPQ99417 103 aaPredicted RBP19.3■□□□□ 0.68
TNFRSF1A-201ENST00000162749 RDH14Q9HBH5 336 aa19.3■□□□□ 0.68
TNFRSF1A-201ENST00000162749 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms