RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 OR2T34Q8NGX1 318 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 OR2T11Q8NH01 316 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 OR2T3Q8NH03 318 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 NAT14Q8WUY8 206 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 SKA2Q8WVK7 121 aaPredicted RBP8.13□□□□□ -1.11
VAMP3-201ENST00000054666 IRF7Q92985 503 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 PPWD1Q96BP3 646 aaKnown RBP8.13□□□□□ -1.11
VAMP3-201ENST00000054666 TCEAL4Q96EI5 215 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 RDH14Q9HBH5 336 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 TLR9Q9NR96 1032 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 SPHK2Q9NRA0 654 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 HEBP1Q9NRV9 189 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 B4GALT6Q9UBX8 382 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 RAB26Q9ULW5 256 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 PIKFYVEQ9Y2I7 2098 aa8.12□□□□□ -1.11
VAMP3-201ENST00000054666 GRXCR2A6NFK2 248 aa8.12□□□□□ -1.11
VAMP3-201ENST00000054666 AQP12BA6NM10 295 aa8.12□□□□□ -1.11
VAMP3-201ENST00000054666 ZNF839A8K0R7 811 aa8.12□□□□□ -1.11
VAMP3-201ENST00000054666 AGAP14A8MT82 685 aa8.12□□□□□ -1.11
VAMP3-201ENST00000054666 HIDE1A8MVS5 230 aa8.12□□□□□ -1.11
VAMP3-201ENST00000054666 FXYD1O00168 92 aa8.12□□□□□ -1.11
VAMP3-201ENST00000054666 RFPL2O75678 378 aa8.12□□□□□ -1.11
VAMP3-201ENST00000054666 ENO2P09104 434 aaPredicted RBP8.12□□□□□ -1.11
VAMP3-201ENST00000054666 C1SP09871 688 aa8.12□□□□□ -1.11
VAMP3-201ENST00000054666 LINC00271P0C7V0 271 aa8.12□□□□□ -1.11
VAMP3-201ENST00000054666 ZCCHC18P0CG32 403 aa8.12□□□□□ -1.11
VAMP3-201ENST00000054666 BMP1P13497 986 aa8.12□□□□□ -1.11
VAMP3-201ENST00000054666 EPB42P16452 691 aa8.12□□□□□ -1.11
VAMP3-201ENST00000054666 POLR2EP19388 210 aaKnown RBP8.12□□□□□ -1.11
VAMP3-201ENST00000054666 LHCGRP22888 699 aa8.12□□□□□ -1.11
VAMP3-201ENST00000054666 PSMA4P25789 261 aaKnown RBP8.12□□□□□ -1.11
VAMP3-201ENST00000054666 CA5AP35218 305 aa8.12□□□□□ -1.11
VAMP3-201ENST00000054666 SPINT3P49223 89 aa8.12□□□□□ -1.11
VAMP3-201ENST00000054666 HTR6P50406 440 aa8.12□□□□□ -1.11
VAMP3-201ENST00000054666 ERVFC1P60507 584 aa8.12□□□□□ -1.11
VAMP3-201ENST00000054666 UFM1P61960 85 aa8.12□□□□□ -1.11
VAMP3-201ENST00000054666 FOLH1Q04609 750 aa8.12□□□□□ -1.11
VAMP3-201ENST00000054666 PHKG1Q16816 387 aa8.12□□□□□ -1.11
VAMP3-201ENST00000054666 IMPG1Q17R60 797 aa8.12□□□□□ -1.11
VAMP3-201ENST00000054666 C18orf21Q32NC0 220 aaPredicted RBP8.12□□□□□ -1.11
VAMP3-201ENST00000054666 ATP13A5Q4VNC0 1218 aa8.12□□□□□ -1.11
VAMP3-201ENST00000054666 IRAK1BP1Q5VVH5 260 aa8.12□□□□□ -1.11
VAMP3-201ENST00000054666 AQP12AQ8IXF9 295 aa8.12□□□□□ -1.11
VAMP3-201ENST00000054666 TCAIMQ8N3R3 496 aa8.12□□□□□ -1.11
VAMP3-201ENST00000054666 MRPL43Q8N983 215 aaKnown RBP8.12□□□□□ -1.11
VAMP3-201ENST00000054666 ZUFSPQ96AP4 578 aa8.12□□□□□ -1.11
VAMP3-201ENST00000054666 RHBDF1Q96CC6 855 aa8.12□□□□□ -1.11
VAMP3-201ENST00000054666 GBP5Q96PP8 586 aa8.12□□□□□ -1.11
VAMP3-201ENST00000054666 ZBTB18Q99592 522 aa8.12□□□□□ -1.11
VAMP3-201ENST00000054666 TMEM79Q9BSE2 394 aa8.12□□□□□ -1.11
VAMP3-201ENST00000054666 SPATA16Q9BXB7 569 aa8.12□□□□□ -1.11
VAMP3-201ENST00000054666 CD244Q9BZW8 370 aa8.12□□□□□ -1.11
VAMP3-201ENST00000054666 BRD9Q9H8M2 597 aa8.12□□□□□ -1.11
VAMP3-201ENST00000054666 MAP10Q9P2G4 905 aa8.12□□□□□ -1.11
VAMP3-201ENST00000054666 TRPS1Q9UHF7 1281 aa8.12□□□□□ -1.11
VAMP3-201ENST00000054666 ZMYM5Q9UJ78 669 aa8.12□□□□□ -1.11
VAMP3-201ENST00000054666 POLR3HQ9Y535 204 aaPredicted RBP8.12□□□□□ -1.11
VAMP3-201ENST00000054666 SLC4A7Q9Y6M7 1214 aa8.12□□□□□ -1.11
VAMP3-201ENST00000054666 MTCL1Q9Y4B5 1905 aaKnown RBP8.12□□□□□ -1.11
VAMP3-201ENST00000054666 SOBPA7XYQ1 873 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 SLC28A1O00337 649 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 IFRD1O00458 451 aaPredicted RBP8.11□□□□□ -1.11
VAMP3-201ENST00000054666 SLC9A3R1O14745 358 aaPredicted RBP8.11□□□□□ -1.11
VAMP3-201ENST00000054666 AKAP10O43572 662 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 TLL1O43897 1013 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 DNAJA2O60884 412 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 RNASEH1O60930 286 aaKnown RBP8.11□□□□□ -1.11
VAMP3-201ENST00000054666 RNASEH2AO75792 299 aaKnown RBP8.11□□□□□ -1.11
VAMP3-201ENST00000054666 WDR47O94967 919 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 C8GP07360 202 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 EBLN1P0CF75 366 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 XPAP23025 273 aaPredicted RBP8.11□□□□□ -1.11
VAMP3-201ENST00000054666 HOXA9P31269 272 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 VIPR1P32241 457 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 CHN2P52757 468 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 RPL38P63173 70 aaKnown RBP8.11□□□□□ -1.11
VAMP3-201ENST00000054666 PTSQ03393 145 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 EMX2Q04743 252 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 PDK3Q15120 406 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 ZNF77Q15935 545 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 AP5B1Q2VPB7 878 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 AASDHQ4L235 1098 aaPredicted RBP8.11□□□□□ -1.11
VAMP3-201ENST00000054666 LRRC73Q5JTD7 316 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 HABP4Q5JVS0 413 aaKnown RBP8.11□□□□□ -1.11
VAMP3-201ENST00000054666 ZFAND4Q86XD8 727 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 SLC15A3Q8IY34 581 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 ADGRG2Q8IZP9 1017 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 LILRA2Q8N149 483 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 SFRP1Q8N474 314 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 GOLM1Q8NBJ4 401 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 POF1BQ8WVV4 589 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 VPS33AQ96AX1 596 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 ARMC5Q96C12 935 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 OTUB2Q96DC9 234 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 DUS3LQ96G46 650 aaKnown RBP8.11□□□□□ -1.11
VAMP3-201ENST00000054666 HBEGFQ99075 208 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 RAD9AQ99638 391 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 KCTD14Q9BQ13 255 aaPredicted RBP8.11□□□□□ -1.11
VAMP3-201ENST00000054666 ALG2Q9H553 416 aa8.11□□□□□ -1.11
VAMP3-201ENST00000054666 ELOVL2Q9NXB9 296 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms