RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Mcm8Q9CWV1 833 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 H2bfmQ9DAB5 224 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Umodl1Q5DID3 1319 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Gm17093F6XGJ4 214 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Gm13128L7MU96 475 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Cxcr3O88410 367 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Il1aP01582 270 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Nfkb1P25799 971 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Apobec1P51908 229 aaKnown RBP9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Idh2P54071 452 aaKnown RBP9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Nudt2P56380 147 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Polr3bP59470 1133 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Abraxas2Q3TCJ1 415 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Lcp2Q60787 533 aaKnown RBP9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 TCAIMQ66JZ4 499 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Klhl42Q8BFQ9 493 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Slc45a1Q8BIV7 751 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Cstf2tQ8C7E9 632 aaKnown RBP9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Piwil2Q8CDG1 971 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Cnot3Q8K0V4 751 aaKnown RBP9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Atg10Q8R1P4 215 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Gtf2a1lQ8R4I4 468 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Chst15Q91XQ5 561 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 AassQ99K67 926 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Themis3Q9CU24 569 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 TrmuQ9DAT5 417 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Smok1Q9QYZ4 484 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Fiz1Q9WTJ4 500 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Mad2l1Q9Z1B5 205 aa9.61□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 PhipQ8VDD9 1821 aaKnown RBP9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 SktA2AQ25 1946 aaKnown RBP9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Sirpb1aA0A0A6YYP6 397 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Mup6A2AV72 179 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Olfr1153A2AVC0 318 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Zfp651E9PZ11 729 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Zfp384E9Q1A5 584 aaKnown RBP9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Kcnk4O88454 398 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Oas1aP11928 367 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Slc2a2P14246 523 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Psmd3P14685 530 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Ifrd1P19182 449 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Esr1P19785 599 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Serpina3cP29621 417 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Q5EBG8 199 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Actr3bQ641P0 418 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Cyp4b1Q64462 511 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Lingo3Q6GQU6 589 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 InavaQ7TN12 663 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 B3gnt5Q8BGY6 376 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Lrch3Q8BVU0 778 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Q8CDN1 933 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Oas1gQ8K469 367 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Trib2Q8K4K3 343 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Ugt2b1Q8R084 529 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Olfr1311Q8VET0 312 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Fcf1Q9CTH6 198 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Serpinb1aQ9D154 379 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Slc25a14Q9Z2B2 325 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Zgrf1Q0VGT4 1863 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Adgra2Q91ZV8 1336 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Fam166bA2AIP0 273 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Sod3O09164 251 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Akap3O88987 864 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 H2-Q8P14430 326 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Ndst2P52850 883 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 H2-Q6P79568 326 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 TekQ02858 1122 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Trpc1Q61056 793 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 MvdQ99JF5 401 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Msh4Q99MT2 958 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Shmt2Q9CZN7 504 aaKnown RBP9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 2610042L04RikQ9D073 150 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Tmbim6Q9D2C7 237 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Haus5Q9D786 619 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Usp12Q9D9M2 370 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 TheglQ9DA15 459 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 AcadsbQ9DBL1 432 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 NplQ9DCJ9 320 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Trip4Q9QXN3 581 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Gm16427J3QN52 483 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Gm6502L7N456 481 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Man2b1O09159 1013 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Klk1b8P07628 261 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 CcnfP51944 777 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Rpl26P61255 145 aaKnown RBP9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Cntnap5bQ0V8T8 1292 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Ap5b1Q3TAP4 876 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Itih2Q61703 946 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Tmem151aQ6GQT5 468 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Lix1Q6P566 282 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Nudcd1Q6PIP5 582 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Olfr1128Q7TR47 311 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Hspa13Q8BM72 471 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Vps37aQ8CHS8 397 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Ints10Q8K2A7 710 aaKnown RBP9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 DcxrQ91X52 244 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Serpinb11Q9CQV3 388 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 ArskQ9D2L1 553 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Nif3l1Q9EQ80 376 aa9.6□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Pin1Q9QUR7 165 aa9.6□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms