RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Mkl2P59759 1080 aa12.52□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Emx2Q04744 253 aa12.52□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Usp22Q5DU02 525 aa12.52□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Fam189a1Q6A044 515 aa12.52□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Tnpo3Q6P2B1 923 aaKnown RBP12.52□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Rnf220Q6PDX6 566 aa12.52□□□□□ -0.4
Rnf4-201ENSMUST00000030992 RragdQ7TT45 449 aa12.52□□□□□ -0.4
Rnf4-201ENSMUST00000030992 SgtaQ8BJU0 315 aa12.52□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Fam221bQ8C627 487 aa12.52□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Cryl1Q99KP3 319 aa12.52□□□□□ -0.4
Rnf4-201ENSMUST00000030992 SardhQ99LB7 919 aa12.52□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Ska2Q9CR46 120 aa12.52□□□□□ -0.4
Rnf4-201ENSMUST00000030992 AicdaQ9WVE0 198 aa12.52□□□□□ -0.4
Rnf4-201ENSMUST00000030992 A0A286YCD0 109 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Itga8A2ARA8 1062 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Zfp952B0V2W4 504 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Sec14l5B2RXM5 696 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Il1rl1P14719 567 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 ArsaP50428 506 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 St14P56677 855 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Cyp2c65Q148B1 490 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Tapt1Q4VBD2 564 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Ankrd13bQ5F259 626 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Foxj1Q61660 421 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Taf1cQ6PDZ2 836 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Dna2Q6ZQJ5 1062 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Mgat5bQ765H6 792 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 SyncripQ7TMK9 623 aaKnown RBP12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Olfr664Q7TRP5 306 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Pcdh20Q8BIZ0 952 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Sept11Q8C1B7 431 aaKnown RBP12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Mterf1aQ8CHZ9 379 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Unc5aQ8K1S4 898 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Capn8Q91VA3 703 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Hdac11Q91WA3 347 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 GcshQ91WK5 170 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Pgm3Q9CYR6 542 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 TheglQ9DA15 459 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Slc7a8Q9QXW9 531 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Rps6kb2Q9Z1M4 485 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Osbpl10S4R1M9 766 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Igkv5-39A0A0G2JDV4 115 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 SmoktcrA2KF29 484 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Phf11bB4XVQ1 276 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Vmn2r118E9Q1C1 853 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Zfp105G3X9I0 524 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Vmn2r21K7N6Y7 853 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Vmn2r20L7N2B1 853 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 TertO70372 1122 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Dnmt3aO88508 908 aaKnown RBP12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 F2P19221 618 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Slc2a3P32037 493 aaKnown RBP12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 TshrP47750 764 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 LmnaP48678 665 aaKnown RBP12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Pdcd5P56812 126 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Eps8Q08509 821 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Sorbs2Q3UTJ2 1180 aaKnown RBP12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Nfatc2Q60591 927 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Itga7Q61738 1179 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Lemd2Q6DVA0 511 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Krt73Q6NXH9 539 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Plekha6Q7TQG1 1173 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Ube2q1Q7TSS2 422 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Znf423Q80TS5 1292 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Ostm1Q8BGT0 338 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Cnksr3Q8BMA3 555 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Ppp1r3eQ8BRJ4 279 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Rbms3Q8BWL5 431 aaKnown RBP12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 SntnQ8C9X1 147 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 CenpiQ8K1K4 746 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 AmotQ8VHG2 1126 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Dcdc2cQ9D1B8 347 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Mfsd10Q9D2V8 456 aaKnown RBP12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Gpr63Q9EQQ3 425 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Snap29Q9ERB0 260 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 PtsQ9R1Z7 144 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Gipc1Q9Z0G0 333 aa12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 VarsQ9Z1Q9 1263 aaKnown RBP12.52□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Pdia2D3Z6P0 527 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Apol11bE9PUZ0 337 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Rnf165E9QAU8 347 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Zfp846G3X996 541 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Sema6aO35464 1031 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Prox1P48437 737 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Aff3P51827 1254 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Rab26Q504M8 260 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Tnfaip2Q61333 691 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Pwwp2aQ69Z61 730 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Zfp324Q78F42 583 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Olfr1036Q7TR85 310 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Sit1Q8C503 180 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Pcyox1lQ8C7K6 495 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Hid1Q8R1F6 788 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Gramd1aQ8VEF1 722 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Olfr677Q8VF06 312 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Mta3Q924K8 591 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 MvdQ99JF5 401 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 RragcQ99K70 398 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Znf639Q99KZ6 485 aa12.51□□□□□ -0.41
Rnf4-201ENSMUST00000030992 Dhrs4Q99LB2 279 aa12.51□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 31.8 ms