RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 ACMSDQ8TDX5 336 aa17.18■□□□□ 0.34
PHGDH-230ENST00000641927 TSNARE1Q96NA8 513 aa17.18■□□□□ 0.34
PHGDH-230ENST00000641927 SYTL2Q9HCH5 934 aa17.18■□□□□ 0.34
PHGDH-230ENST00000641927 PIKFYVEQ9Y2I7 2098 aa17.18■□□□□ 0.34
PHGDH-230ENST00000641927 A0A087X1B8 175 aa17.17■□□□□ 0.34
PHGDH-230ENST00000641927 TNFRSF10CO14798 259 aa17.17■□□□□ 0.34
PHGDH-230ENST00000641927 SPAG7O75391 227 aa17.17■□□□□ 0.34
PHGDH-230ENST00000641927 RASGRP1O95267 797 aa17.17■□□□□ 0.34
PHGDH-230ENST00000641927 CCDC166P0CW27 439 aa17.17■□□□□ 0.34
PHGDH-230ENST00000641927 CREB1P16220 341 aa17.17■□□□□ 0.34
PHGDH-230ENST00000641927 ZNF37AP17032 561 aaPredicted RBP17.17■□□□□ 0.34
PHGDH-230ENST00000641927 CD9P21926 228 aa17.17■□□□□ 0.34
PHGDH-230ENST00000641927 AOAHP28039 575 aa17.17■□□□□ 0.34
PHGDH-230ENST00000641927 FZD2Q14332 565 aa17.17■□□□□ 0.34
PHGDH-230ENST00000641927 ALG11Q2TAA5 492 aa17.17■□□□□ 0.34
PHGDH-230ENST00000641927 TMEM207Q6UWW9 146 aa17.17■□□□□ 0.34
PHGDH-230ENST00000641927 MTERF4Q7Z6M4 381 aaKnown RBP17.17■□□□□ 0.34
PHGDH-230ENST00000641927 PARGQ86W56 976 aa17.17■□□□□ 0.34
PHGDH-230ENST00000641927 SKA2Q8WVK7 121 aaPredicted RBP17.17■□□□□ 0.34
PHGDH-230ENST00000641927 ASZ1Q8WWH4 475 aa17.17■□□□□ 0.34
PHGDH-230ENST00000641927 TLCD1Q96CP7 247 aa17.17■□□□□ 0.34
PHGDH-230ENST00000641927 LINC00615Q96LM1 132 aaPredicted RBP17.17■□□□□ 0.34
PHGDH-230ENST00000641927 OR2M4Q96R27 311 aa17.17■□□□□ 0.34
PHGDH-230ENST00000641927 UNKQ9C0B0 810 aaKnown RBP17.17■□□□□ 0.34
PHGDH-230ENST00000641927 GPR27Q9NS67 375 aa17.17■□□□□ 0.34
PHGDH-230ENST00000641927 TMEM74BQ9NUR3 256 aa17.17■□□□□ 0.34
PHGDH-230ENST00000641927 DNAJC28Q9NX36 388 aa17.17■□□□□ 0.34
PHGDH-230ENST00000641927 SUSD2Q9UGT4 822 aa17.17■□□□□ 0.34
PHGDH-230ENST00000641927 R4GN57 208 aa17.17■□□□□ 0.34
PHGDH-230ENST00000641927 SDK1Q7Z5N4 2213 aa17.17■□□□□ 0.34
PHGDH-230ENST00000641927 A0A1B0GTW7 788 aa17.16■□□□□ 0.34
PHGDH-230ENST00000641927 MGAT4DA6NG13 374 aa17.16■□□□□ 0.34
PHGDH-230ENST00000641927 PRR5-ARHGAP8B1AHC4 643 aa17.16■□□□□ 0.34
PHGDH-230ENST00000641927 COPEO14579 308 aa17.16■□□□□ 0.34
PHGDH-230ENST00000641927 VILLO15195 856 aa17.16■□□□□ 0.34
PHGDH-230ENST00000641927 TNFP01375 233 aa17.16■□□□□ 0.34
PHGDH-230ENST00000641927 BRAFP15056 766 aa17.16■□□□□ 0.34
PHGDH-230ENST00000641927 VCLP18206 1134 aa17.16■□□□□ 0.34
PHGDH-230ENST00000641927 HPDP32754 393 aaPredicted RBP17.16■□□□□ 0.34
PHGDH-230ENST00000641927 IL2P60568 153 aa17.16■□□□□ 0.34
PHGDH-230ENST00000641927 ARHGAP8P85298 464 aa17.16■□□□□ 0.34
PHGDH-230ENST00000641927 CSHL1Q14406 222 aa17.16■□□□□ 0.34
PHGDH-230ENST00000641927 C11orf96Q7Z7L8 435 aa17.16■□□□□ 0.34
PHGDH-230ENST00000641927 OR2L2Q8NH16 312 aa17.16■□□□□ 0.34
PHGDH-230ENST00000641927 KCTD4Q8WVF5 259 aa17.16■□□□□ 0.34
PHGDH-230ENST00000641927 ANKRD49Q8WVL7 239 aa17.16■□□□□ 0.34
PHGDH-230ENST00000641927 TMEM159Q96B96 161 aa17.16■□□□□ 0.34
PHGDH-230ENST00000641927 LINGO1Q96FE5 620 aa17.16■□□□□ 0.34
PHGDH-230ENST00000641927 SCARF2Q96GP6 870 aaPredicted RBP17.16■□□□□ 0.34
PHGDH-230ENST00000641927 LRFN3Q9BTN0 628 aa17.16■□□□□ 0.34
PHGDH-230ENST00000641927 OSGEPL1Q9H4B0 414 aa17.16■□□□□ 0.34
PHGDH-230ENST00000641927 KCNK9Q9NPC2 374 aa17.16■□□□□ 0.34
PHGDH-230ENST00000641927 KLC4Q9NSK0 619 aa17.16■□□□□ 0.34
PHGDH-230ENST00000641927 SLC23A2Q9UGH3 650 aa17.16■□□□□ 0.34
PHGDH-230ENST00000641927 PILRBQ9UKJ0 227 aa17.16■□□□□ 0.34
PHGDH-230ENST00000641927 PNMA8BQ9ULN7 279 aaPredicted RBP17.16■□□□□ 0.34
PHGDH-230ENST00000641927 ANKRD6Q9Y2G4 727 aa17.16■□□□□ 0.34
PHGDH-230ENST00000641927 TOP3BO95985 862 aaKnown RBP17.16■□□□□ 0.34
PHGDH-230ENST00000641927 DGKAP23743 735 aa17.16■□□□□ 0.34
PHGDH-230ENST00000641927 PREPP48147 710 aa17.16■□□□□ 0.34
PHGDH-230ENST00000641927 CCT5P48643 541 aa17.16■□□□□ 0.34
PHGDH-230ENST00000641927 RGS4P49798 205 aa17.16■□□□□ 0.34
PHGDH-230ENST00000641927 EIF2B5Q13144 721 aaKnown RBP17.16■□□□□ 0.34
PHGDH-230ENST00000641927 NFE2L1Q14494 772 aa17.16■□□□□ 0.34
PHGDH-230ENST00000641927 ACSBG2Q5FVE4 666 aa17.16■□□□□ 0.34
PHGDH-230ENST00000641927 ZC3H14Q6PJT7 736 aaKnown RBP17.16■□□□□ 0.34
PHGDH-230ENST00000641927 CCDC91Q7Z6B0 441 aa17.16■□□□□ 0.34
PHGDH-230ENST00000641927 SPATS2Q86XZ4 545 aaKnown RBP17.16■□□□□ 0.34
PHGDH-230ENST00000641927 SYT12Q8IV01 421 aa17.16■□□□□ 0.34
PHGDH-230ENST00000641927 NKAPQ8N5F7 415 aaKnown RBP17.16■□□□□ 0.34
PHGDH-230ENST00000641927 LILRA3Q8N6C8 439 aaPredicted RBP17.16■□□□□ 0.34
PHGDH-230ENST00000641927 HM13Q8TCT9 377 aa17.16■□□□□ 0.34
PHGDH-230ENST00000641927 EEF1AKMT1Q8WVE0 214 aa17.16■□□□□ 0.34
PHGDH-230ENST00000641927 IQCGQ9H095 443 aaKnown RBP17.16■□□□□ 0.34
PHGDH-230ENST00000641927 LATS2Q9NRM7 1088 aa17.16■□□□□ 0.34
PHGDH-230ENST00000641927 KCNK6Q9Y257 313 aa17.16■□□□□ 0.34
PHGDH-230ENST00000641927 PLEKHM1Q9Y4G2 1056 aa17.16■□□□□ 0.34
PHGDH-230ENST00000641927 ACTL7BQ9Y614 415 aa17.16■□□□□ 0.34
PHGDH-230ENST00000641927 DNMT3AQ9Y6K1 912 aaPredicted RBP17.16■□□□□ 0.34
PHGDH-230ENST00000641927 C17orf113A0A1B0GUU1 675 aa17.15■□□□□ 0.34
PHGDH-230ENST00000641927 A0A1B0GVT2 93 aa17.15■□□□□ 0.34
PHGDH-230ENST00000641927 H3BQF6 201 aa17.15■□□□□ 0.34
PHGDH-230ENST00000641927 GSTM1P09488 218 aa17.15■□□□□ 0.34
PHGDH-230ENST00000641927 CCNFP41002 786 aa17.15■□□□□ 0.34
PHGDH-230ENST00000641927 CSRP3P50461 194 aa17.15■□□□□ 0.34
PHGDH-230ENST00000641927 HK3P52790 923 aa17.15■□□□□ 0.34
PHGDH-230ENST00000641927 NXPH1P58417 271 aa17.15■□□□□ 0.34
PHGDH-230ENST00000641927 GSTM4Q03013 218 aa17.15■□□□□ 0.34
PHGDH-230ENST00000641927 SLC18A2Q05940 514 aa17.15■□□□□ 0.34
PHGDH-230ENST00000641927 PLEKHS1Q5SXH7 462 aa17.15■□□□□ 0.34
PHGDH-230ENST00000641927 SH2D5Q6ZV89 423 aa17.15■□□□□ 0.34
PHGDH-230ENST00000641927 PLD6Q8N2A8 252 aaKnown RBP17.15■□□□□ 0.34
PHGDH-230ENST00000641927 OXR1Q8N573 874 aa17.15■□□□□ 0.34
PHGDH-230ENST00000641927 ALKBH8Q96BT7 664 aaKnown RBP17.15■□□□□ 0.34
PHGDH-230ENST00000641927 APOPT1Q96IL0 206 aa17.15■□□□□ 0.34
PHGDH-230ENST00000641927 SELENOSQ9BQE4 189 aa17.15■□□□□ 0.34
PHGDH-230ENST00000641927 TIMM29Q9BSF4 260 aa17.15■□□□□ 0.34
PHGDH-230ENST00000641927 TMEM168Q9H0V1 697 aa17.15■□□□□ 0.34
PHGDH-230ENST00000641927 COG4Q9H9E3 785 aa17.15■□□□□ 0.34
PHGDH-230ENST00000641927 KLHL42Q9P2K6 505 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms