RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 NIPAL4Q0D2K0 466 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 AP1B1Q10567 949 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 SCAPQ12770 1279 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 TPSAB1Q15661 275 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 ZKSCAN8Q15776 578 aaPredicted RBP6.05□□□□□ -1.44
ATM-229ENST00000639953 GALNTL6Q49A17 601 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 CERCAMQ5T4B2 595 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 PIK3R6Q5UE93 754 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 AFMIDQ63HM1 303 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 NADSYN1Q6IA69 706 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 RFWD3Q6PCD5 774 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 Q6ZS52 159 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 FAM47EQ6ZV65 393 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 RALGPS2Q86X27 583 aaPredicted RBP6.05□□□□□ -1.44
ATM-229ENST00000639953 LRRC6Q86X45 466 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 VSIG1Q86XK7 387 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 CDKL3Q8IVW4 592 aaPredicted RBP6.05□□□□□ -1.44
ATM-229ENST00000639953 C10orf67Q8IYJ2 551 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.05□□□□□ -1.44
ATM-229ENST00000639953 ARFGAP2Q8N6H7 521 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 AMER2Q8N7J2 671 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 PPM1NQ8N819 430 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 OR52K2Q8NGK3 314 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 OR52K1Q8NGK4 314 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 SPATA22Q8NHS9 363 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.05□□□□□ -1.44
ATM-229ENST00000639953 TCP10LQ8TDR4 215 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 TFB1MQ8WVM0 346 aaKnown RBP6.05□□□□□ -1.44
ATM-229ENST00000639953 IGSF8Q969P0 613 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 NTAN1Q96AB6 310 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 MOCOSQ96EN8 888 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 PGAP3Q96FM1 320 aaPredicted RBP6.05□□□□□ -1.44
ATM-229ENST00000639953 SLC39A13Q96H72 371 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 ZNF778Q96MU6 729 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 SPATA13Q96N96 652 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 SMIM14Q96QK8 99 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 SRPK1Q96SB4 655 aaKnown RBP6.05□□□□□ -1.44
ATM-229ENST00000639953 GPHA2Q96T91 129 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 EBNA1BP2Q99848 306 aaKnown RBP6.05□□□□□ -1.44
ATM-229ENST00000639953 C20orf27Q9GZN8 174 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 CNOT10Q9H9A5 744 aaKnown RBP6.05□□□□□ -1.44
ATM-229ENST00000639953 LMAN1LQ9HAT1 526 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 MSL2Q9HCI7 577 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 ZDHHC4Q9NPG8 344 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 ACSS2Q9NR19 701 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 SPHK2Q9NRA0 654 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 POLR3BQ9NW08 1133 aaPredicted RBP6.05□□□□□ -1.44
ATM-229ENST00000639953 C2orf42Q9NWW7 574 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 MOCS1Q9NZB8 636 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 MPP6Q9NZW5 540 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 TBC1D14Q9P2M4 693 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 ZNF212Q9UDV6 495 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 SLC24A2Q9UI40 661 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 LSM7Q9UK45 103 aaKnown RBP6.05□□□□□ -1.44
ATM-229ENST00000639953 EMCNQ9ULC0 261 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 HS3ST4Q9Y661 456 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 MYLKQ15746 1914 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 NCOR1O75376 2440 aa6.05□□□□□ -1.44
ATM-229ENST00000639953 MYO18AQ92614 2054 aaKnown RBP6.04□□□□□ -1.44
ATM-229ENST00000639953 KRTAP23-1A1A580 65 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 CCDC78A2IDD5 438 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 CCT8L1PA6NM43 557 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 TRIM49D1C9J1S8 452 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 K7EQS6 105 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 PRPF4O43172 522 aaKnown RBP eCLIP6.04□□□□□ -1.44
ATM-229ENST00000639953 IRAK2O43187 625 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 CDH16O75309 829 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 JCHAINP01591 159 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 IGLV3-27P01718 113 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 VIMP08670 466 aaKnown RBP6.04□□□□□ -1.44
ATM-229ENST00000639953 T-ENOLP0DO92 83 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 ERVK-10P10266 1014 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 TYRP14679 529 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 KRT4P19013 534 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 GABRB3P28472 473 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 SLC6A4P31645 630 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 HARS2P49590 506 aaKnown RBP6.04□□□□□ -1.44
ATM-229ENST00000639953 GEMIN4P57678 1058 aaKnown RBP6.04□□□□□ -1.44
ATM-229ENST00000639953 PPIDQ08752 370 aaKnown RBP6.04□□□□□ -1.44
ATM-229ENST00000639953 GALNT2Q10471 571 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 MTAPQ13126 283 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 DNAJC3Q13217 504 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 MSLNQ13421 630 aaPredicted RBP6.04□□□□□ -1.44
ATM-229ENST00000639953 RASA2Q15283 850 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 LACTB2Q53H82 288 aaPredicted RBP6.04□□□□□ -1.44
ATM-229ENST00000639953 ALFQ53S48 1182 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 TMEM196Q5HYL7 178 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 LVRNQ6Q4G3 990 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 Q6ZRM9 215 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 OTOAQ7RTW8 1153 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 PCGF5Q86SE9 256 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 MAP7D3Q8IWC1 876 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 KLHDC8BQ8IXV7 354 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 PGBD5Q8N414 524 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 LILRB2Q8N423 598 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 ATP11CQ8NB49 1132 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 PRSS33Q8NF86 280 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 CCHCR1Q8TD31 782 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 ZNF75CPQ92670 426 aaPredicted RBP6.04□□□□□ -1.44
ATM-229ENST00000639953 OTUB2Q96DC9 234 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms