RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 WWP1Q9H0M0 922 aa13.53□□□□□ -0.24
PNKP-228ENST00000637325 SLC40A1Q9NP59 571 aa13.53□□□□□ -0.24
PNKP-228ENST00000637325 RAB6BQ9NRW1 208 aa13.53□□□□□ -0.24
PNKP-228ENST00000637325 IMP3Q9NV31 184 aaKnown RBP13.53□□□□□ -0.24
PNKP-228ENST00000637325 ZDHHC3Q9NYG2 299 aa13.53□□□□□ -0.24
PNKP-228ENST00000637325 PAK5Q9P286 719 aa13.53□□□□□ -0.24
PNKP-228ENST00000637325 ACSL5Q9ULC5 683 aa13.53□□□□□ -0.24
PNKP-228ENST00000637325 PPP2R2CQ9Y2T4 447 aa13.53□□□□□ -0.24
PNKP-228ENST00000637325 SPTBP11277 2137 aa13.52□□□□□ -0.24
PNKP-228ENST00000637325 AGAP14A8MT82 685 aa13.52□□□□□ -0.25
PNKP-228ENST00000637325 STMND1H3BQB6 276 aa13.52□□□□□ -0.25
PNKP-228ENST00000637325 CAPN5O15484 640 aaPredicted RBP13.52□□□□□ -0.25
PNKP-228ENST00000637325 CEP104O60308 925 aa13.52□□□□□ -0.25
PNKP-228ENST00000637325 RASSF9O75901 435 aa13.52□□□□□ -0.25
PNKP-228ENST00000637325 FGGP02679 453 aa13.52□□□□□ -0.25
PNKP-228ENST00000637325 POLBP06746 335 aa13.52□□□□□ -0.25
PNKP-228ENST00000637325 SLC35G4P0C7Q5 338 aa13.52□□□□□ -0.25
PNKP-228ENST00000637325 ATP1A2P50993 1020 aa13.52□□□□□ -0.25
PNKP-228ENST00000637325 GFERP55789 205 aa13.52□□□□□ -0.25
PNKP-228ENST00000637325 CACNG1Q06432 222 aa13.52□□□□□ -0.25
PNKP-228ENST00000637325 KRT33BQ14525 404 aa13.52□□□□□ -0.25
PNKP-228ENST00000637325 GSE1Q14687 1217 aa13.52□□□□□ -0.25
PNKP-228ENST00000637325 PLCL1Q15111 1095 aa13.52□□□□□ -0.25
PNKP-228ENST00000637325 CCDC38Q502W7 563 aa13.52□□□□□ -0.25
PNKP-228ENST00000637325 ZNF449Q6P9G9 518 aa13.52□□□□□ -0.25
PNKP-228ENST00000637325 PRUNE1Q86TP1 453 aa13.52□□□□□ -0.25
PNKP-228ENST00000637325 SERPINA9Q86WD7 417 aa13.52□□□□□ -0.25
PNKP-228ENST00000637325 ZDHHC12Q96GR4 267 aa13.52□□□□□ -0.25
PNKP-228ENST00000637325 C9orf72Q96LT7 481 aa13.52□□□□□ -0.25
PNKP-228ENST00000637325 C12orf66Q96MD2 445 aa13.52□□□□□ -0.25
PNKP-228ENST00000637325 DDA1Q9BW61 102 aa13.52□□□□□ -0.25
PNKP-228ENST00000637325 VPS37BQ9H9H4 285 aa13.52□□□□□ -0.25
PNKP-228ENST00000637325 OGFRQ9NZT2 677 aa13.52□□□□□ -0.25
PNKP-228ENST00000637325 DRG1Q9Y295 367 aaKnown RBP13.52□□□□□ -0.25
PNKP-228ENST00000637325 PCDHGA3Q9Y5H0 932 aa13.52□□□□□ -0.25
PNKP-228ENST00000637325 B3GALT1Q9Y5Z6 326 aa13.52□□□□□ -0.25
PNKP-228ENST00000637325 CFAP20Q9Y6A4 193 aaKnown RBP13.52□□□□□ -0.25
PNKP-228ENST00000637325 MN1Q10571 1320 aaPredicted RBP13.51□□□□□ -0.25
PNKP-228ENST00000637325 HEATR9A2RTY3 570 aa13.51□□□□□ -0.25
PNKP-228ENST00000637325 H7C0S8 307 aa13.51□□□□□ -0.25
PNKP-228ENST00000637325 K7ENP7 123 aa13.51□□□□□ -0.25
PNKP-228ENST00000637325 APRTP07741 180 aa13.51□□□□□ -0.25
PNKP-228ENST00000637325 MTHFD1P11586 935 aaKnown RBP13.51□□□□□ -0.25
PNKP-228ENST00000637325 MSNP26038 577 aaKnown RBP13.51□□□□□ -0.25
PNKP-228ENST00000637325 ACRV1P26436 265 aa13.51□□□□□ -0.25
PNKP-228ENST00000637325 CDKN1CP49918 316 aaPredicted RBP13.51□□□□□ -0.25
PNKP-228ENST00000637325 MC2RQ01718 297 aa13.51□□□□□ -0.25
PNKP-228ENST00000637325 RHDQ02161 417 aa13.51□□□□□ -0.25
PNKP-228ENST00000637325 TAF1BQ53T94 588 aaPredicted RBP13.51□□□□□ -0.25
PNKP-228ENST00000637325 ANKS6Q68DC2 871 aa13.51□□□□□ -0.25
PNKP-228ENST00000637325 IRGCQ6NXR0 463 aa13.51□□□□□ -0.25
PNKP-228ENST00000637325 KLHL35Q6PF15 583 aa13.51□□□□□ -0.25
PNKP-228ENST00000637325 INO80CQ6PI98 192 aaPredicted RBP13.51□□□□□ -0.25
PNKP-228ENST00000637325 CEACAM20Q6UY09 585 aa13.51□□□□□ -0.25
PNKP-228ENST00000637325 C4orf22Q6V702 233 aa13.51□□□□□ -0.25
PNKP-228ENST00000637325 GPR150Q8NGU9 434 aa13.51□□□□□ -0.25
PNKP-228ENST00000637325 HM13Q8TCT9 377 aa13.51□□□□□ -0.25
PNKP-228ENST00000637325 JPH3Q8WXH2 748 aaPredicted RBP13.51□□□□□ -0.25
PNKP-228ENST00000637325 PMEPA1Q969W9 287 aa13.51□□□□□ -0.25
PNKP-228ENST00000637325 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.51□□□□□ -0.25
PNKP-228ENST00000637325 LINC00615Q96LM1 132 aaPredicted RBP13.51□□□□□ -0.25
PNKP-228ENST00000637325 TEFMQ96QE5 360 aaKnown RBP13.51□□□□□ -0.25
PNKP-228ENST00000637325 CCM2Q9BSQ5 444 aa13.51□□□□□ -0.25
PNKP-228ENST00000637325 TLR10Q9BXR5 811 aa13.51□□□□□ -0.25
PNKP-228ENST00000637325 GRPEL1Q9HAV7 217 aa13.51□□□□□ -0.25
PNKP-228ENST00000637325 HOMER3Q9NSC5 361 aa13.51□□□□□ -0.25
PNKP-228ENST00000637325 ZKSCAN5Q9Y2L8 839 aa13.51□□□□□ -0.25
PNKP-228ENST00000637325 SSUH2Q9Y2M2 353 aa13.51□□□□□ -0.25
PNKP-228ENST00000637325 COLEC10Q9Y6Z7 277 aa13.51□□□□□ -0.25
PNKP-228ENST00000637325 LOC400499M0QZD8 3231 aa13.51□□□□□ -0.25
PNKP-228ENST00000637325 ATRXP46100 2492 aa13.5□□□□□ -0.25
PNKP-228ENST00000637325 MROH6A6NGR9 719 aa13.5□□□□□ -0.25
PNKP-228ENST00000637325 SUN1O94901 812 aa13.5□□□□□ -0.25
PNKP-228ENST00000637325 C9P02748 559 aa13.5□□□□□ -0.25
PNKP-228ENST00000637325 ZSCAN5DPP0CG00 497 aa13.5□□□□□ -0.25
PNKP-228ENST00000637325 PRSS56P0CW18 603 aa13.5□□□□□ -0.25
PNKP-228ENST00000637325 ADRA1DP25100 572 aa13.5□□□□□ -0.25
PNKP-228ENST00000637325 CXCR5P32302 372 aa13.5□□□□□ -0.25
PNKP-228ENST00000637325 RPL22P35268 128 aaKnown RBP13.5□□□□□ -0.25
PNKP-228ENST00000637325 CAPZBP47756 277 aa13.5□□□□□ -0.25
PNKP-228ENST00000637325 LEPRP48357 1165 aaKnown RBP13.5□□□□□ -0.25
PNKP-228ENST00000637325 PRLHRP49683 370 aa13.5□□□□□ -0.25
PNKP-228ENST00000637325 SEPHS1P49903 392 aa13.5□□□□□ -0.25
PNKP-228ENST00000637325 FOXM1Q08050 763 aa13.5□□□□□ -0.25
PNKP-228ENST00000637325 SEMA5AQ13591 1074 aa13.5□□□□□ -0.25
PNKP-228ENST00000637325 SIX1Q15475 284 aaPredicted RBP13.5□□□□□ -0.25
PNKP-228ENST00000637325 CACHD1Q5VU97 1274 aa13.5□□□□□ -0.25
PNKP-228ENST00000637325 DRICH1Q6PGQ1 229 aaPredicted RBP13.5□□□□□ -0.25
PNKP-228ENST00000637325 FAM92BQ6ZTR7 304 aa13.5□□□□□ -0.25
PNKP-228ENST00000637325 VASH2Q86V25 355 aa13.5□□□□□ -0.25
PNKP-228ENST00000637325 DTX1Q86Y01 620 aa13.5□□□□□ -0.25
PNKP-228ENST00000637325 IL22RA1Q8N6P7 574 aa13.5□□□□□ -0.25
PNKP-228ENST00000637325 BMPERQ8N8U9 685 aa13.5□□□□□ -0.25
PNKP-228ENST00000637325 ZSCAN1Q8NBB4 408 aa13.5□□□□□ -0.25
PNKP-228ENST00000637325 RSC1A1Q92681 617 aa13.5□□□□□ -0.25
PNKP-228ENST00000637325 BBC3Q96PG8 261 aaPredicted RBP13.5□□□□□ -0.25
PNKP-228ENST00000637325 INSM2Q96T92 566 aaPredicted RBP13.5□□□□□ -0.25
PNKP-228ENST00000637325 TTC1Q99614 292 aa13.5□□□□□ -0.25
PNKP-228ENST00000637325 CTRCQ99895 268 aa13.5□□□□□ -0.25
PNKP-228ENST00000637325 ZPBPQ9BS86 351 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms