RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 MED16Q9Y2X0 877 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 AK5Q9Y6K8 562 aa11.38□□□□□ -0.59
CLN6-217ENST00000636964 ZNF254O75437 659 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 SERPINA6P08185 405 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 ZNF37AP17032 561 aaPredicted RBP11.37□□□□□ -0.59
CLN6-217ENST00000636964 RPL14P50914 215 aaKnown RBP11.37□□□□□ -0.59
CLN6-217ENST00000636964 KPNA2P52292 529 aaKnown RBP11.37□□□□□ -0.59
CLN6-217ENST00000636964 NAA20P61599 178 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 SETMARQ53H47 684 aaPredicted RBP11.37□□□□□ -0.59
CLN6-217ENST00000636964 PRSS36Q5K4E3 855 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 NEK5Q6P3R8 708 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 BORAQ6PGQ7 559 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 Q6ZVU0 165 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 CYB5D2Q8WUJ1 264 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 ZNF707Q96C28 371 aaPredicted RBP11.37□□□□□ -0.59
CLN6-217ENST00000636964 BIRC8Q96P09 236 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 OR52B2Q96RD2 323 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 ABCG4Q9H172 646 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 MTG2Q9H4K7 406 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 ZFYVE1Q9HBF4 777 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 TBCCD1Q9NVR7 557 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 AP4B1Q9Y6B7 739 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 SH3PXD2BA1X283 911 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 WISP3O95389 354 aaPredicted RBP11.37□□□□□ -0.59
CLN6-217ENST00000636964 RBP1P09455 135 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 THRAP10827 490 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 PABPC1P11940 636 aaKnown RBP11.37□□□□□ -0.59
CLN6-217ENST00000636964 UGT1A6P19224 532 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 ITGAXP20702 1163 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 UGT1A1P22309 533 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 UGT1A4P22310 534 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 EPHA3P29320 983 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 UGT1A3P35503 534 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 UGT1A5P35504 534 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 VIPR2P41587 438 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 UBE3AQ05086 875 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 TGFBIQ15582 683 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 TMEM215Q68D42 235 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 DPY19L3Q6ZPD9 716 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 LILRA2Q8N149 483 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 CHST14Q8NCH0 376 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 TCF12Q99081 682 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 ABCG8Q9H221 673 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 ATP13A3Q9H7F0 1226 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 MAGEE1Q9HCI5 957 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 INTS10Q9NVR2 710 aaKnown RBP11.37□□□□□ -0.59
CLN6-217ENST00000636964 GTSE1Q9NYZ3 720 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 IKZF3Q9UKT9 509 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 DOLKQ9UPQ8 538 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 RAP2CQ9Y3L5 183 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 ANKRD12Q6UB98 2062 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 TRANK1O15050 2925 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 A0A0J9YYE9 177 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 LRRC14BA6NHZ5 514 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 C5orf67F2Z3F1 127 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 TMCC2O75069 709 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 H2AFYO75367 372 aaKnown RBP11.37□□□□□ -0.59
CLN6-217ENST00000636964 IPO13O94829 963 aaKnown RBP11.37□□□□□ -0.59
CLN6-217ENST00000636964 OXSR1O95747 527 aaPredicted RBP11.37□□□□□ -0.59
CLN6-217ENST00000636964 TRBC1P01850 177 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 CD1DP15813 335 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 CHRM3P20309 590 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 HMGCLP35914 325 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 ETV3P41162 512 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 RELAQ04206 551 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 OR4D1Q15615 310 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 ZNF77Q15935 545 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 C22orf39Q6P5X5 142 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 AHI1Q8N157 1196 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 SIDT2Q8NBJ9 832 aaKnown RBP11.37□□□□□ -0.59
CLN6-217ENST00000636964 GALNT6Q8NCL4 622 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 ACTRT2Q8TDY3 377 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 SMG7Q92540 1137 aaKnown RBP11.37□□□□□ -0.59
CLN6-217ENST00000636964 CGREF1Q99674 301 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 CLK4Q9HAZ1 481 aaKnown RBP11.37□□□□□ -0.59
CLN6-217ENST00000636964 TNFRSF12AQ9NP84 129 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 TAS2R13Q9NYV9 303 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 HACD3Q9P035 362 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 RWDD3Q9Y3V2 267 aa11.37□□□□□ -0.59
CLN6-217ENST00000636964 UGT2B4P06133 528 aa11.36□□□□□ -0.59
CLN6-217ENST00000636964 SERPINA4P29622 427 aa11.36□□□□□ -0.59
CLN6-217ENST00000636964 CDH13P55290 713 aa11.36□□□□□ -0.59
CLN6-217ENST00000636964 SNRPD1P62314 119 aaKnown RBP11.36□□□□□ -0.59
CLN6-217ENST00000636964 CD300CQ08708 224 aa11.36□□□□□ -0.59
CLN6-217ENST00000636964 SHHQ15465 462 aa11.36□□□□□ -0.59
CLN6-217ENST00000636964 EPGNQ6UW88 154 aa11.36□□□□□ -0.59
CLN6-217ENST00000636964 ZNF366Q8N895 744 aa11.36□□□□□ -0.59
CLN6-217ENST00000636964 ZFYVE19Q96K21 471 aa11.36□□□□□ -0.59
CLN6-217ENST00000636964 SLC2A11Q9BYW1 496 aa11.36□□□□□ -0.59
CLN6-217ENST00000636964 DNAJC28Q9NX36 388 aa11.36□□□□□ -0.59
CLN6-217ENST00000636964 ZNHIT2Q9UHR6 403 aa11.36□□□□□ -0.59
CLN6-217ENST00000636964 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.36□□□□□ -0.59
CLN6-217ENST00000636964 NPIPB15A6NHN6 443 aaPredicted RBP11.36□□□□□ -0.59
CLN6-217ENST00000636964 UBXN8O00124 270 aa11.36□□□□□ -0.59
CLN6-217ENST00000636964 MATN2O00339 956 aa11.36□□□□□ -0.59
CLN6-217ENST00000636964 GRID2O43424 1007 aa11.36□□□□□ -0.59
CLN6-217ENST00000636964 HTRA2O43464 458 aaPredicted RBP11.36□□□□□ -0.59
CLN6-217ENST00000636964 SUPT7LO94864 414 aa11.36□□□□□ -0.59
CLN6-217ENST00000636964 SIX3O95343 332 aaPredicted RBP11.36□□□□□ -0.59
CLN6-217ENST00000636964 ARSAP15289 507 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms