RNA–Protein interactions for RNA: ENST00000635857.1

LIN28B-202, Transcript of lin-28 homolog B, humanhuman

TSL 5

Gene LIN28B, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-202ENST00000635857 ANKRD22Q5VYY1 191 aa16.69■□□□□ 0.26
LIN28B-202ENST00000635857 METRNLQ641Q3 311 aa16.69■□□□□ 0.26
LIN28B-202ENST00000635857 MRNIPQ6NTE8 343 aa16.69■□□□□ 0.26
LIN28B-202ENST00000635857 PACS1Q6VY07 963 aa16.69■□□□□ 0.26
LIN28B-202ENST00000635857 SYT10Q6XYQ8 523 aa16.69■□□□□ 0.26
LIN28B-202ENST00000635857 TMEM26Q6ZUK4 368 aa16.69■□□□□ 0.26
LIN28B-202ENST00000635857 ZNF534Q76KX8 674 aa16.69■□□□□ 0.26
LIN28B-202ENST00000635857 RAB11FIP2Q7L804 512 aa16.69■□□□□ 0.26
LIN28B-202ENST00000635857 C17orf53Q8N3J3 647 aaPredicted RBP16.69■□□□□ 0.26
LIN28B-202ENST00000635857 MPP5Q8N3R9 675 aa16.69■□□□□ 0.26
LIN28B-202ENST00000635857 FBXO39Q8N4B4 442 aa16.69■□□□□ 0.26
LIN28B-202ENST00000635857 NAT14Q8WUY8 206 aa16.69■□□□□ 0.26
LIN28B-202ENST00000635857 NCSTNQ92542 709 aa16.69■□□□□ 0.26
LIN28B-202ENST00000635857 SGSM3Q96HU1 749 aa16.69■□□□□ 0.26
LIN28B-202ENST00000635857 C12orf66Q96MD2 445 aa16.69■□□□□ 0.26
LIN28B-202ENST00000635857 SERPINB12Q96P63 405 aa16.69■□□□□ 0.26
LIN28B-202ENST00000635857 KIFC1Q9BW19 673 aa16.69■□□□□ 0.26
LIN28B-202ENST00000635857 WWP1Q9H0M0 922 aa16.69■□□□□ 0.26
LIN28B-202ENST00000635857 THSD1Q9NS62 852 aa16.69■□□□□ 0.26
LIN28B-202ENST00000635857 SCHIP1Q9P0W5 487 aaPredicted RBP16.69■□□□□ 0.26
LIN28B-202ENST00000635857 ZMIZ1Q9ULJ6 1067 aa16.69■□□□□ 0.26
LIN28B-202ENST00000635857 HEBP2Q9Y5Z4 205 aa16.69■□□□□ 0.26
LIN28B-202ENST00000635857 KNTC1P50748 2209 aa16.68■□□□□ 0.26
LIN28B-202ENST00000635857 UNC13CQ8NB66 2214 aa16.68■□□□□ 0.26
LIN28B-202ENST00000635857 COL27A1Q8IZC6 1860 aaPredicted RBP16.68■□□□□ 0.26
LIN28B-202ENST00000635857 PRR19A6NJB7 356 aa16.68■□□□□ 0.26
LIN28B-202ENST00000635857 DNALI1O14645 258 aaPredicted RBP16.68■□□□□ 0.26
LIN28B-202ENST00000635857 NDC80O14777 642 aa16.68■□□□□ 0.26
LIN28B-202ENST00000635857 CD3EAPO15446 510 aaKnown RBP16.68■□□□□ 0.26
LIN28B-202ENST00000635857 NDUFS3O75489 264 aa16.68■□□□□ 0.26
LIN28B-202ENST00000635857 POLBP06746 335 aa16.68■□□□□ 0.26
LIN28B-202ENST00000635857 BRAFP15056 766 aa16.68■□□□□ 0.26
LIN28B-202ENST00000635857 NMBRP28336 390 aa16.68■□□□□ 0.26
LIN28B-202ENST00000635857 SLC19A1P41440 591 aa16.68■□□□□ 0.26
LIN28B-202ENST00000635857 PDX1P52945 283 aa16.68■□□□□ 0.26
LIN28B-202ENST00000635857 TRA2AQ13595 282 aaKnown RBP eCLIP16.68■□□□□ 0.26
LIN28B-202ENST00000635857 DHX34Q14147 1143 aaKnown RBP16.68■□□□□ 0.26
LIN28B-202ENST00000635857 IZUMO3Q5VZ72 239 aa16.68■□□□□ 0.26
LIN28B-202ENST00000635857 KLHL35Q6PF15 583 aa16.68■□□□□ 0.26
LIN28B-202ENST00000635857 FAM83HQ6ZRV2 1179 aaPredicted RBP16.68■□□□□ 0.26
LIN28B-202ENST00000635857 B3GNT8Q7Z7M8 397 aa16.68■□□□□ 0.26
LIN28B-202ENST00000635857 SDCCAG8Q86SQ7 713 aaPredicted RBP16.68■□□□□ 0.26
LIN28B-202ENST00000635857 HOOK3Q86VS8 718 aa16.68■□□□□ 0.26
LIN28B-202ENST00000635857 PROSER1Q86XN7 944 aa16.68■□□□□ 0.26
LIN28B-202ENST00000635857 CLDN19Q8N6F1 224 aa16.68■□□□□ 0.26
LIN28B-202ENST00000635857 OR4D9Q8NGE8 314 aa16.68■□□□□ 0.26
LIN28B-202ENST00000635857 ELMO1Q92556 727 aa16.68■□□□□ 0.26
LIN28B-202ENST00000635857 NUDT22Q9BRQ3 303 aa16.68■□□□□ 0.26
LIN28B-202ENST00000635857 TREX1Q9NSU2 369 aa16.68■□□□□ 0.26
LIN28B-202ENST00000635857 ZNF624Q9P2J8 865 aaPredicted RBP16.68■□□□□ 0.26
LIN28B-202ENST00000635857 NEU2Q9Y3R4 380 aa16.68■□□□□ 0.26
LIN28B-202ENST00000635857 MAD1L1Q9Y6D9 718 aa16.68■□□□□ 0.26
LIN28B-202ENST00000635857 COLEC10Q9Y6Z7 277 aa16.68■□□□□ 0.26
LIN28B-202ENST00000635857 SMAPO00193 183 aa16.67■□□□□ 0.26
LIN28B-202ENST00000635857 LIN7AO14910 233 aaPredicted RBP16.67■□□□□ 0.26
LIN28B-202ENST00000635857 PLD2O14939 933 aa16.67■□□□□ 0.26
LIN28B-202ENST00000635857 HGSO14964 777 aaPredicted RBP16.67■□□□□ 0.26
LIN28B-202ENST00000635857 CASC3O15234 703 aaKnown RBP16.67■□□□□ 0.26
LIN28B-202ENST00000635857 AVILO75366 819 aa16.67■□□□□ 0.26
LIN28B-202ENST00000635857 UBXN7O94888 489 aa16.67■□□□□ 0.26
LIN28B-202ENST00000635857 VAPBO95292 243 aa16.67■□□□□ 0.26
LIN28B-202ENST00000635857 MTHFD1P11586 935 aaKnown RBP16.67■□□□□ 0.26
LIN28B-202ENST00000635857 NDUFS1P28331 727 aa16.67■□□□□ 0.26
LIN28B-202ENST00000635857 MLLT3P42568 568 aaPredicted RBP16.67■□□□□ 0.26
LIN28B-202ENST00000635857 LIMK2P53671 638 aa16.67■□□□□ 0.26
LIN28B-202ENST00000635857 RPA4Q13156 261 aa16.67■□□□□ 0.26
LIN28B-202ENST00000635857 SQSTM1Q13501 440 aa16.67■□□□□ 0.26
LIN28B-202ENST00000635857 CLCA4Q14CN2 919 aa16.67■□□□□ 0.26
LIN28B-202ENST00000635857 RPE65Q16518 533 aa16.67■□□□□ 0.26
LIN28B-202ENST00000635857 DNAJC21Q5F1R6 531 aaKnown RBP16.67■□□□□ 0.26
LIN28B-202ENST00000635857 RNF187Q5TA31 235 aaPredicted RBP16.67■□□□□ 0.26
LIN28B-202ENST00000635857 TMEM71Q6P5X7 295 aa16.67■□□□□ 0.26
LIN28B-202ENST00000635857 PLXDC1Q8IUK5 500 aa16.67■□□□□ 0.26
LIN28B-202ENST00000635857 SLITRK4Q8IW52 837 aa16.67■□□□□ 0.26
LIN28B-202ENST00000635857 NAT8LQ8N9F0 302 aa16.67■□□□□ 0.26
LIN28B-202ENST00000635857 GABPB2Q8TAK5 448 aaPredicted RBP16.67■□□□□ 0.26
LIN28B-202ENST00000635857 ZNF669Q96BR6 464 aaPredicted RBP16.67■□□□□ 0.26
LIN28B-202ENST00000635857 MFSD3Q96ES6 412 aa16.67■□□□□ 0.26
LIN28B-202ENST00000635857 CCDC97Q96F63 343 aaPredicted RBP16.67■□□□□ 0.26
LIN28B-202ENST00000635857 CCDC74BQ96LY2 380 aa16.67■□□□□ 0.26
LIN28B-202ENST00000635857 ZNF578Q96N58 590 aaPredicted RBP16.67■□□□□ 0.26
LIN28B-202ENST00000635857 TBC1D10AQ9BXI6 508 aa16.67■□□□□ 0.26
LIN28B-202ENST00000635857 COG4Q9H9E3 785 aa16.67■□□□□ 0.26
LIN28B-202ENST00000635857 SLC40A1Q9NP59 571 aa16.67■□□□□ 0.26
LIN28B-202ENST00000635857 VPS9D1Q9Y2B5 631 aa16.67■□□□□ 0.26
LIN28B-202ENST00000635857 WDR37Q9Y2I8 494 aa16.67■□□□□ 0.26
LIN28B-202ENST00000635857 LOXL2Q9Y4K0 774 aa16.67■□□□□ 0.26
LIN28B-202ENST00000635857 PCDHGA8Q9Y5G5 932 aa16.67■□□□□ 0.26
LIN28B-202ENST00000635857 ACACBO00763 2458 aa16.66■□□□□ 0.26
LIN28B-202ENST00000635857 SGTAO43765 313 aa16.66■□□□□ 0.26
LIN28B-202ENST00000635857 CSTF2P33240 577 aaKnown RBP eCLIP16.66■□□□□ 0.26
LIN28B-202ENST00000635857 PLOD1Q02809 727 aaPredicted RBP16.66■□□□□ 0.26
LIN28B-202ENST00000635857 ZFP36L1Q07352 338 aaKnown RBP16.66■□□□□ 0.26
LIN28B-202ENST00000635857 THOC5Q13769 683 aaKnown RBP16.66■□□□□ 0.26
LIN28B-202ENST00000635857 BOP1Q14137 746 aaKnown RBP16.66■□□□□ 0.26
LIN28B-202ENST00000635857 GPR18Q14330 331 aa16.66■□□□□ 0.26
LIN28B-202ENST00000635857 TMED2Q15363 201 aa16.66■□□□□ 0.26
LIN28B-202ENST00000635857 RNASEH2BQ5TBB1 312 aaKnown RBP16.66■□□□□ 0.26
LIN28B-202ENST00000635857 PTRHD1Q6GMV3 140 aaKnown RBP16.66■□□□□ 0.26
LIN28B-202ENST00000635857 KIAA0930Q6ICG6 404 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms