RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 OR2T11Q8NH01 316 aa19.41■□□□□ 0.7
PCDHB11-202ENST00000624887 CDK15Q96Q40 435 aa19.41■□□□□ 0.7
PCDHB11-202ENST00000624887 COPS8Q99627 209 aa19.41■□□□□ 0.7
PCDHB11-202ENST00000624887 GPATCH1Q9BRR8 931 aaKnown RBP19.41■□□□□ 0.7
PCDHB11-202ENST00000624887 SLC52A3Q9NQ40 469 aa19.41■□□□□ 0.7
PCDHB11-202ENST00000624887 KLHL42Q9P2K6 505 aa19.41■□□□□ 0.7
PCDHB11-202ENST00000624887 XYLBO75191 536 aa19.41■□□□□ 0.7
PCDHB11-202ENST00000624887 HNRNPA1P09651 372 aaKnown RBP eCLIP19.41■□□□□ 0.7
PCDHB11-202ENST00000624887 C1SP09871 688 aa19.41■□□□□ 0.7
PCDHB11-202ENST00000624887 POLR2LP62875 67 aaKnown RBP19.41■□□□□ 0.7
PCDHB11-202ENST00000624887 ERVK-8P63133 956 aa19.41■□□□□ 0.7
PCDHB11-202ENST00000624887 UBE3AQ05086 875 aa19.41■□□□□ 0.7
PCDHB11-202ENST00000624887 OGFRL1Q5TC84 451 aaPredicted RBP19.41■□□□□ 0.7
PCDHB11-202ENST00000624887 TMEM215Q68D42 235 aa19.41■□□□□ 0.7
PCDHB11-202ENST00000624887 GDPD4Q6W3E5 623 aa19.41■□□□□ 0.7
PCDHB11-202ENST00000624887 TMEM126BQ8IUX1 230 aa19.41■□□□□ 0.7
PCDHB11-202ENST00000624887 ADGRG2Q8IZP9 1017 aa19.41■□□□□ 0.7
PCDHB11-202ENST00000624887 CHCHD4Q8N4Q1 142 aa19.41■□□□□ 0.7
PCDHB11-202ENST00000624887 DCBLD1Q8N8Z6 715 aa19.41■□□□□ 0.7
PCDHB11-202ENST00000624887 PBXIP1Q96AQ6 731 aa19.41■□□□□ 0.7
PCDHB11-202ENST00000624887 OTUB2Q96DC9 234 aa19.41■□□□□ 0.7
PCDHB11-202ENST00000624887 HOPXQ9BPY8 73 aaPredicted RBP19.41■□□□□ 0.7
PCDHB11-202ENST00000624887 BRINP2Q9C0B6 783 aa19.41■□□□□ 0.7
PCDHB11-202ENST00000624887 ELOVL2Q9NXB9 296 aa19.41■□□□□ 0.7
PCDHB11-202ENST00000624887 MARK1Q9P0L2 795 aa19.41■□□□□ 0.7
PCDHB11-202ENST00000624887 B4GALT6Q9UBX8 382 aa19.41■□□□□ 0.7
PCDHB11-202ENST00000624887 IGLV3-16A0A075B6K0 115 aa19.4■□□□□ 0.7
PCDHB11-202ENST00000624887 ANGPT2O15123 496 aa19.4■□□□□ 0.7
PCDHB11-202ENST00000624887 TAPBPO15533 448 aa19.4■□□□□ 0.7
PCDHB11-202ENST00000624887 GUCA1CO95843 209 aa19.4■□□□□ 0.7
PCDHB11-202ENST00000624887 OTCP00480 354 aa19.4■□□□□ 0.7
PCDHB11-202ENST00000624887 CAPN1P07384 714 aa19.4■□□□□ 0.7
PCDHB11-202ENST00000624887 CBSLP0DN79 551 aa19.4■□□□□ 0.7
PCDHB11-202ENST00000624887 TCF3P15923 654 aa19.4■□□□□ 0.7
PCDHB11-202ENST00000624887 EPCAMP16422 314 aa19.4■□□□□ 0.7
PCDHB11-202ENST00000624887 VCLP18206 1134 aa19.4■□□□□ 0.7
PCDHB11-202ENST00000624887 CBSP35520 551 aa19.4■□□□□ 0.7
PCDHB11-202ENST00000624887 SPINT3P49223 89 aa19.4■□□□□ 0.7
PCDHB11-202ENST00000624887 NTHL1P78549 312 aa19.4■□□□□ 0.7
PCDHB11-202ENST00000624887 B4GALNT1Q00973 533 aa19.4■□□□□ 0.7
PCDHB11-202ENST00000624887 RALGDSQ12967 914 aa19.4■□□□□ 0.7
PCDHB11-202ENST00000624887 PHKG1Q16816 387 aa19.4■□□□□ 0.7
PCDHB11-202ENST00000624887 SCIMPQ6UWF3 145 aa19.4■□□□□ 0.7
PCDHB11-202ENST00000624887 RFLNAQ6ZTI6 216 aa19.4■□□□□ 0.7
PCDHB11-202ENST00000624887 METTL6Q8TCB7 284 aa19.4■□□□□ 0.7
PCDHB11-202ENST00000624887 ULK4Q96C45 1275 aa19.4■□□□□ 0.7
PCDHB11-202ENST00000624887 ZSWIM3Q96MP5 696 aa19.4■□□□□ 0.7
PCDHB11-202ENST00000624887 KLHL32Q96NJ5 620 aa19.4■□□□□ 0.7
PCDHB11-202ENST00000624887 RDH14Q9HBH5 336 aa19.4■□□□□ 0.7
PCDHB11-202ENST00000624887 KCTD5Q9NXV2 234 aa19.4■□□□□ 0.7
PCDHB11-202ENST00000624887 PRSS51A0A1B0GVH4 220 aa19.39■□□□□ 0.7
PCDHB11-202ENST00000624887 HSPA7P48741 367 aa19.39■□□□□ 0.7
PCDHB11-202ENST00000624887 SLC7A2P52569 658 aa19.39■□□□□ 0.7
PCDHB11-202ENST00000624887 ATXN3P54252 364 aaPredicted RBP19.39■□□□□ 0.7
PCDHB11-202ENST00000624887 SFT2D3Q587I9 215 aa19.39■□□□□ 0.7
PCDHB11-202ENST00000624887 C6orf136Q5SQH8 315 aa19.39■□□□□ 0.7
PCDHB11-202ENST00000624887 SULT1C3Q6IMI6 304 aa19.39■□□□□ 0.7
PCDHB11-202ENST00000624887 BRAT1Q6PJG6 821 aa19.39■□□□□ 0.7
PCDHB11-202ENST00000624887 Q6ZSR9 355 aa19.39■□□□□ 0.7
PCDHB11-202ENST00000624887 SPATA24Q86W54 205 aa19.39■□□□□ 0.7
PCDHB11-202ENST00000624887 AHI1Q8N157 1196 aa19.39■□□□□ 0.7
PCDHB11-202ENST00000624887 OR4F6Q8NGB9 312 aa19.39■□□□□ 0.7
PCDHB11-202ENST00000624887 UCMAQ8WVF2 138 aa19.39■□□□□ 0.7
PCDHB11-202ENST00000624887 PPP2R3CQ969Q6 453 aa19.39■□□□□ 0.7
PCDHB11-202ENST00000624887 SLC39A3Q9BRY0 314 aa19.39■□□□□ 0.7
PCDHB11-202ENST00000624887 APOL5Q9BWW9 433 aa19.39■□□□□ 0.7
PCDHB11-202ENST00000624887 SLC2A11Q9BYW1 496 aa19.39■□□□□ 0.7
PCDHB11-202ENST00000624887 PCDHAC1Q9H158 963 aa19.39■□□□□ 0.7
PCDHB11-202ENST00000624887 MTIF3Q9H2K0 278 aaKnown RBP19.39■□□□□ 0.7
PCDHB11-202ENST00000624887 IPPKQ9H8X2 491 aa19.39■□□□□ 0.7
PCDHB11-202ENST00000624887 ZMYM5Q9UJ78 669 aa19.39■□□□□ 0.7
PCDHB11-202ENST00000624887 ERVW-1Q9UQF0 538 aa19.39■□□□□ 0.7
PCDHB11-202ENST00000624887 HCFC2Q9Y5Z7 792 aa19.39■□□□□ 0.7
PCDHB11-202ENST00000624887 POLR2EP19388 210 aaKnown RBP19.39■□□□□ 0.69
PCDHB11-202ENST00000624887 IRS1P35568 1242 aa19.39■□□□□ 0.69
PCDHB11-202ENST00000624887 RECQLP46063 649 aaPredicted RBP19.39■□□□□ 0.69
PCDHB11-202ENST00000624887 TRAF3Q13114 568 aa19.39■□□□□ 0.69
PCDHB11-202ENST00000624887 METTL2BQ6P1Q9 378 aaKnown RBP19.39■□□□□ 0.69
PCDHB11-202ENST00000624887 PRMT9Q6P2P2 845 aa19.39■□□□□ 0.69
PCDHB11-202ENST00000624887 MINDY1Q8N5J2 469 aa19.39■□□□□ 0.69
PCDHB11-202ENST00000624887 UBTD2Q8WUN7 234 aa19.39■□□□□ 0.69
PCDHB11-202ENST00000624887 RHBDF1Q96CC6 855 aa19.39■□□□□ 0.69
PCDHB11-202ENST00000624887 ABCD2Q9UBJ2 740 aa19.39■□□□□ 0.69
PCDHB11-202ENST00000624887 RWDD3Q9Y3V2 267 aa19.39■□□□□ 0.69
PCDHB11-202ENST00000624887 WNT6Q9Y6F9 365 aa19.39■□□□□ 0.69
PCDHB11-202ENST00000624887 PDE4DIPQ5VU43 2346 aa19.38■□□□□ 0.69
PCDHB11-202ENST00000624887 C8BP07358 591 aa19.38■□□□□ 0.69
PCDHB11-202ENST00000624887 PAX7P23759 505 aa19.38■□□□□ 0.69
PCDHB11-202ENST00000624887 ARL1P40616 181 aaPredicted RBP19.38■□□□□ 0.69
PCDHB11-202ENST00000624887 CAMK1Q14012 370 aa19.38■□□□□ 0.69
PCDHB11-202ENST00000624887 RCAN2Q14206 197 aa19.38■□□□□ 0.69
PCDHB11-202ENST00000624887 ADGRE1Q14246 886 aa19.38■□□□□ 0.69
PCDHB11-202ENST00000624887 ATP6AP1LQ52LC2 224 aa19.38■□□□□ 0.69
PCDHB11-202ENST00000624887 PDCD4Q53EL6 469 aaKnown RBP19.38■□□□□ 0.69
PCDHB11-202ENST00000624887 LRRC73Q5JTD7 316 aa19.38■□□□□ 0.69
PCDHB11-202ENST00000624887 GRASPQ7Z6J2 395 aaPredicted RBP19.38■□□□□ 0.69
PCDHB11-202ENST00000624887 FRS2Q8WU20 508 aa19.38■□□□□ 0.69
PCDHB11-202ENST00000624887 ATP6V1E2Q96A05 226 aa19.38■□□□□ 0.69
PCDHB11-202ENST00000624887 SPDL1Q96EA4 605 aa19.38■□□□□ 0.69
PCDHB11-202ENST00000624887 NR1H4Q96RI1 486 aaPredicted RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms