RNA–Protein interactions for RNA: ENST00000623466.1

PCDHB17P-202, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 3,066 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-202ENST00000623466 FBXO22Q8NEZ5 403 aa13.24□□□□□ -0.29
PCDHB17P-202ENST00000623466 MUS81Q96NY9 551 aa13.24□□□□□ -0.29
PCDHB17P-202ENST00000623466 DEFB118Q96PH6 123 aa13.24□□□□□ -0.29
PCDHB17P-202ENST00000623466 TRIM62Q9BVG3 475 aa13.24□□□□□ -0.29
PCDHB17P-202ENST00000623466 SMPD3Q9NY59 655 aaPredicted RBP13.24□□□□□ -0.29
PCDHB17P-202ENST00000623466 ACTR3BQ9P1U1 418 aa13.24□□□□□ -0.29
PCDHB17P-202ENST00000623466 CDH7Q9ULB5 785 aa13.24□□□□□ -0.29
PCDHB17P-202ENST00000623466 FAM50BQ9Y247 325 aa13.24□□□□□ -0.29
PCDHB17P-202ENST00000623466 VWA8A3KMH1 1905 aa13.24□□□□□ -0.29
PCDHB17P-202ENST00000623466 UBA6A0AVT1 1052 aaPredicted RBP13.24□□□□□ -0.29
PCDHB17P-202ENST00000623466 C2orf78A6NCI8 922 aa13.24□□□□□ -0.29
PCDHB17P-202ENST00000623466 PSMD3O43242 534 aa13.24□□□□□ -0.29
PCDHB17P-202ENST00000623466 PTPN2P17706 415 aa13.24□□□□□ -0.29
PCDHB17P-202ENST00000623466 TACR2P21452 398 aa13.24□□□□□ -0.29
PCDHB17P-202ENST00000623466 DCKP27707 260 aa13.24□□□□□ -0.29
PCDHB17P-202ENST00000623466 MLLT10P55197 1068 aa13.24□□□□□ -0.29
PCDHB17P-202ENST00000623466 NFYCQ13952 458 aa13.24□□□□□ -0.29
PCDHB17P-202ENST00000623466 PAGE3Q5JUK9 113 aa13.24□□□□□ -0.29
PCDHB17P-202ENST00000623466 KIAA1841Q6NSI8 718 aa13.24□□□□□ -0.29
PCDHB17P-202ENST00000623466 CADM3Q8N126 398 aa13.24□□□□□ -0.29
PCDHB17P-202ENST00000623466 SCML4Q8N228 414 aa13.24□□□□□ -0.29
PCDHB17P-202ENST00000623466 OR6K2Q8NGY2 324 aa13.24□□□□□ -0.29
PCDHB17P-202ENST00000623466 ADAMTS16Q8TE57 1224 aa13.24□□□□□ -0.29
PCDHB17P-202ENST00000623466 ACDQ96AP0 544 aa13.24□□□□□ -0.29
PCDHB17P-202ENST00000623466 ESAMQ96AP7 390 aa13.24□□□□□ -0.29
PCDHB17P-202ENST00000623466 RMDN1Q96DB5 314 aa13.24□□□□□ -0.29
PCDHB17P-202ENST00000623466 FUBP3Q96I24 572 aaKnown RBP eCLIP13.24□□□□□ -0.29
PCDHB17P-202ENST00000623466 C1orf74Q96LT6 269 aa13.24□□□□□ -0.29
PCDHB17P-202ENST00000623466 ZBED2Q9BTP6 218 aa13.24□□□□□ -0.29
PCDHB17P-202ENST00000623466 SEZ6LQ9BYH1 1024 aa13.24□□□□□ -0.29
PCDHB17P-202ENST00000623466 TMEM248Q9NWD8 314 aa13.24□□□□□ -0.29
PCDHB17P-202ENST00000623466 CHD7Q9P2D1 2997 aa13.24□□□□□ -0.29
PCDHB17P-202ENST00000623466 ABCD2Q9UBJ2 740 aa13.24□□□□□ -0.29
PCDHB17P-202ENST00000623466 SLC38A8A6NNN8 435 aa13.23□□□□□ -0.29
PCDHB17P-202ENST00000623466 SEC24AO95486 1093 aa13.23□□□□□ -0.29
PCDHB17P-202ENST00000623466 POLD2P49005 469 aa13.23□□□□□ -0.29
PCDHB17P-202ENST00000623466 PIGFQ07326 219 aa13.23□□□□□ -0.29
PCDHB17P-202ENST00000623466 GPR17Q13304 367 aa13.23□□□□□ -0.29
PCDHB17P-202ENST00000623466 TRIP4Q15650 581 aaPredicted RBP13.23□□□□□ -0.29
PCDHB17P-202ENST00000623466 SIGIRRQ6IA17 410 aa13.23□□□□□ -0.29
PCDHB17P-202ENST00000623466 LCN8Q6JVE9 175 aa13.23□□□□□ -0.29
PCDHB17P-202ENST00000623466 GALNT18Q6P9A2 607 aa13.23□□□□□ -0.29
PCDHB17P-202ENST00000623466 CILP2Q8IUL8 1156 aa13.23□□□□□ -0.29
PCDHB17P-202ENST00000623466 SLC22A9Q8IVM8 553 aa13.23□□□□□ -0.29
PCDHB17P-202ENST00000623466 RNF145Q96MT1 663 aa13.23□□□□□ -0.29
PCDHB17P-202ENST00000623466 HOPXQ9BPY8 73 aaPredicted RBP13.23□□□□□ -0.29
PCDHB17P-202ENST00000623466 ALG2Q9H553 416 aa13.23□□□□□ -0.29
PCDHB17P-202ENST00000623466 SEMA4BQ9NPR2 832 aaPredicted RBP13.23□□□□□ -0.29
PCDHB17P-202ENST00000623466 NLRC5Q86WI3 1866 aa13.23□□□□□ -0.29
PCDHB17P-202ENST00000623466 A8MX80 341 aa13.23□□□□□ -0.29
PCDHB17P-202ENST00000623466 POLR2EP19388 210 aaKnown RBP13.23□□□□□ -0.29
PCDHB17P-202ENST00000623466 DNAJB1P25685 340 aa13.23□□□□□ -0.29
PCDHB17P-202ENST00000623466 RFC2P35250 354 aa13.23□□□□□ -0.29
PCDHB17P-202ENST00000623466 LEPRP48357 1165 aaKnown RBP13.23□□□□□ -0.29
PCDHB17P-202ENST00000623466 ZNF135P52742 658 aaPredicted RBP13.23□□□□□ -0.29
PCDHB17P-202ENST00000623466 TPTEP56180 551 aa13.23□□□□□ -0.29
PCDHB17P-202ENST00000623466 SEMG2Q02383 582 aa13.23□□□□□ -0.29
PCDHB17P-202ENST00000623466 LIPEQ05469 1076 aa13.23□□□□□ -0.29
PCDHB17P-202ENST00000623466 NFATC3Q12968 1075 aa13.23□□□□□ -0.29
PCDHB17P-202ENST00000623466 BFSP2Q13515 415 aa13.23□□□□□ -0.29
PCDHB17P-202ENST00000623466 SERINC3Q13530 473 aa13.23□□□□□ -0.29
PCDHB17P-202ENST00000623466 ITIH5Q86UX2 942 aa13.23□□□□□ -0.29
PCDHB17P-202ENST00000623466 RALGPS2Q86X27 583 aaPredicted RBP13.23□□□□□ -0.29
PCDHB17P-202ENST00000623466 SLC38A6Q8IZM9 456 aa13.23□□□□□ -0.29
PCDHB17P-202ENST00000623466 PACRGLQ8N7B6 248 aa13.23□□□□□ -0.29
PCDHB17P-202ENST00000623466 EFHBQ8N7U6 833 aa13.23□□□□□ -0.29
PCDHB17P-202ENST00000623466 LILRB4Q8NHJ6 448 aa13.23□□□□□ -0.29
PCDHB17P-202ENST00000623466 TTPALQ9BTX7 342 aa13.23□□□□□ -0.29
PCDHB17P-202ENST00000623466 C1orf50Q9BV19 199 aa13.23□□□□□ -0.29
PCDHB17P-202ENST00000623466 TRIM15Q9C019 465 aa13.23□□□□□ -0.29
PCDHB17P-202ENST00000623466 MARCH7Q9H992 704 aa13.23□□□□□ -0.29
PCDHB17P-202ENST00000623466 QPCTLQ9NXS2 382 aa13.23□□□□□ -0.29
PCDHB17P-202ENST00000623466 POLG2Q9UHN1 485 aa13.23□□□□□ -0.29
PCDHB17P-202ENST00000623466 ATP11BQ9Y2G3 1177 aa13.23□□□□□ -0.29
PCDHB17P-202ENST00000623466 ARIH1Q9Y4X5 557 aaPredicted RBP13.23□□□□□ -0.29
PCDHB17P-202ENST00000623466 NCF1BA6NI72 391 aaPredicted RBP13.22□□□□□ -0.29
PCDHB17P-202ENST00000623466 NCF1CA8MVU1 366 aaPredicted RBP13.22□□□□□ -0.29
PCDHB17P-202ENST00000623466 AZIN1O14977 448 aa13.22□□□□□ -0.29
PCDHB17P-202ENST00000623466 SNAP91O60641 907 aa13.22□□□□□ -0.29
PCDHB17P-202ENST00000623466 MYO1DO94832 1006 aa13.22□□□□□ -0.29
PCDHB17P-202ENST00000623466 GOT2P00505 430 aaKnown RBP13.22□□□□□ -0.29
PCDHB17P-202ENST00000623466 INHBBP09529 407 aa13.22□□□□□ -0.29
PCDHB17P-202ENST00000623466 SLC2A3P11169 496 aa13.22□□□□□ -0.29
PCDHB17P-202ENST00000623466 NCF1P14598 390 aaPredicted RBP13.22□□□□□ -0.29
PCDHB17P-202ENST00000623466 CLK3P49761 638 aaKnown RBP13.22□□□□□ -0.29
PCDHB17P-202ENST00000623466 HERVK_113P63132 956 aa13.22□□□□□ -0.29
PCDHB17P-202ENST00000623466 NKX3-2P78367 333 aa13.22□□□□□ -0.29
PCDHB17P-202ENST00000623466 MRPL58Q14197 206 aaKnown RBP13.22□□□□□ -0.29
PCDHB17P-202ENST00000623466 OR4D1Q15615 310 aa13.22□□□□□ -0.29
PCDHB17P-202ENST00000623466 SPRED1Q7Z699 444 aa13.22□□□□□ -0.29
PCDHB17P-202ENST00000623466 KIAA2013Q8IYS2 634 aa13.22□□□□□ -0.29
PCDHB17P-202ENST00000623466 FEM1CQ96JP0 617 aa13.22□□□□□ -0.29
PCDHB17P-202ENST00000623466 SLC30A3Q99726 388 aa13.22□□□□□ -0.29
PCDHB17P-202ENST00000623466 KCTD14Q9BQ13 255 aaPredicted RBP13.22□□□□□ -0.29
PCDHB17P-202ENST00000623466 ERVK-6Q9BXR3 956 aa13.22□□□□□ -0.29
PCDHB17P-202ENST00000623466 ADNPQ9H2P0 1102 aa13.22□□□□□ -0.29
PCDHB17P-202ENST00000623466 INTS7Q9NVH2 962 aaKnown RBP13.22□□□□□ -0.29
PCDHB17P-202ENST00000623466 POLR3BQ9NW08 1133 aaPredicted RBP13.22□□□□□ -0.29
PCDHB17P-202ENST00000623466 GNPTGQ9UJJ9 305 aa13.22□□□□□ -0.29
PCDHB17P-202ENST00000623466 PCDHGA8Q9Y5G5 932 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms