RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 FAM83EQ2M2I3 478 aa17.52■□□□□ 0.39
PTCHD3-202ENST00000622555 TSNAXIP1Q2TAA8 658 aa17.52■□□□□ 0.39
PTCHD3-202ENST00000622555 PLA2G4EQ3MJ16 856 aa17.52■□□□□ 0.39
PTCHD3-202ENST00000622555 TPRG1LQ5T0D9 272 aa17.52■□□□□ 0.39
PTCHD3-202ENST00000622555 AGAP9Q5VTM2 703 aa17.52■□□□□ 0.39
PTCHD3-202ENST00000622555 ENPP7Q6UWV6 458 aa17.52■□□□□ 0.39
PTCHD3-202ENST00000622555 ARMCX6Q7L4S7 300 aa17.52■□□□□ 0.39
PTCHD3-202ENST00000622555 LPCAT2Q7L5N7 544 aa17.52■□□□□ 0.39
PTCHD3-202ENST00000622555 LCA5Q86VQ0 697 aa17.52■□□□□ 0.39
PTCHD3-202ENST00000622555 OR56A4Q8NGH8 313 aa17.52■□□□□ 0.39
PTCHD3-202ENST00000622555 MDM1Q8TC05 714 aa17.52■□□□□ 0.39
PTCHD3-202ENST00000622555 MGARPQ8TDB4 240 aa17.52■□□□□ 0.39
PTCHD3-202ENST00000622555 EEF1AKMT1Q8WVE0 214 aa17.52■□□□□ 0.39
PTCHD3-202ENST00000622555 GAB3Q8WWW8 586 aa17.52■□□□□ 0.39
PTCHD3-202ENST00000622555 LINGO1Q96FE5 620 aa17.52■□□□□ 0.39
PTCHD3-202ENST00000622555 KLHL42Q9P2K6 505 aa17.52■□□□□ 0.39
PTCHD3-202ENST00000622555 SLC17A7Q9P2U7 560 aa17.52■□□□□ 0.39
PTCHD3-202ENST00000622555 TSR3Q9UJK0 312 aaKnown RBP17.52■□□□□ 0.39
PTCHD3-202ENST00000622555 PLLPQ9Y342 182 aa17.52■□□□□ 0.39
PTCHD3-202ENST00000622555 PCYT1BQ9Y5K3 369 aaPredicted RBP17.52■□□□□ 0.39
PTCHD3-202ENST00000622555 KMT2EQ8IZD2 1858 aa17.52■□□□□ 0.39
PTCHD3-202ENST00000622555 FAM86C2PA6NEL3 165 aa17.51■□□□□ 0.39
PTCHD3-202ENST00000622555 TNFRSF10AO00220 468 aa17.51■□□□□ 0.39
PTCHD3-202ENST00000622555 TM9SF1O15321 606 aa17.51■□□□□ 0.39
PTCHD3-202ENST00000622555 POP7O75817 140 aaKnown RBP17.51■□□□□ 0.39
PTCHD3-202ENST00000622555 APOA4P06727 396 aa17.51■□□□□ 0.39
PTCHD3-202ENST00000622555 DGKAP23743 735 aa17.51■□□□□ 0.39
PTCHD3-202ENST00000622555 MDH1P40925 334 aaKnown RBP17.51■□□□□ 0.39
PTCHD3-202ENST00000622555 GLRBP48167 497 aa17.51■□□□□ 0.39
PTCHD3-202ENST00000622555 RGS4P49798 205 aa17.51■□□□□ 0.39
PTCHD3-202ENST00000622555 HSPA14Q0VDF9 509 aa17.51■□□□□ 0.39
PTCHD3-202ENST00000622555 SYTL3Q4VX76 610 aa17.51■□□□□ 0.39
PTCHD3-202ENST00000622555 ACSBG2Q5FVE4 666 aa17.51■□□□□ 0.39
PTCHD3-202ENST00000622555 C16orf46Q6P387 395 aa17.51■□□□□ 0.39
PTCHD3-202ENST00000622555 KLC3Q6P597 504 aa17.51■□□□□ 0.39
PTCHD3-202ENST00000622555 RGL4Q8IZJ4 473 aa17.51■□□□□ 0.39
PTCHD3-202ENST00000622555 SCYL1Q96KG9 808 aa17.51■□□□□ 0.39
PTCHD3-202ENST00000622555 FAM111AQ96PZ2 611 aa17.51■□□□□ 0.39
PTCHD3-202ENST00000622555 CNOT10Q9H9A5 744 aaKnown RBP17.51■□□□□ 0.39
PTCHD3-202ENST00000622555 RMI1Q9H9A7 625 aa17.51■□□□□ 0.39
PTCHD3-202ENST00000622555 NMRAL1Q9HBL8 299 aa17.51■□□□□ 0.39
PTCHD3-202ENST00000622555 FGF22Q9HCT0 170 aa17.51■□□□□ 0.39
PTCHD3-202ENST00000622555 MRPL40Q9NQ50 206 aaKnown RBP17.51■□□□□ 0.39
PTCHD3-202ENST00000622555 TMEM216Q9P0N5 145 aa17.51■□□□□ 0.39
PTCHD3-202ENST00000622555 SDK1Q7Z5N4 2213 aa17.51■□□□□ 0.39
PTCHD3-202ENST00000622555 A0A0C4DFX4 3053 aa17.51■□□□□ 0.39
PTCHD3-202ENST00000622555 ANKRD12Q6UB98 2062 aa17.5■□□□□ 0.39
PTCHD3-202ENST00000622555 PRSS38A1L453 326 aa17.5■□□□□ 0.39
PTCHD3-202ENST00000622555 KMOO15229 486 aa17.5■□□□□ 0.39
PTCHD3-202ENST00000622555 THEGLP0DJG4 465 aa17.5■□□□□ 0.39
PTCHD3-202ENST00000622555 KPNA2P52292 529 aaKnown RBP17.5■□□□□ 0.39
PTCHD3-202ENST00000622555 SLC18A1P54219 525 aa17.5■□□□□ 0.39
PTCHD3-202ENST00000622555 WDR45BQ5MNZ6 344 aa17.5■□□□□ 0.39
PTCHD3-202ENST00000622555 PLEKHS1Q5SXH7 462 aa17.5■□□□□ 0.39
PTCHD3-202ENST00000622555 C11orf74Q86VG3 221 aa17.5■□□□□ 0.39
PTCHD3-202ENST00000622555 GALNT13Q8IUC8 556 aa17.5■□□□□ 0.39
PTCHD3-202ENST00000622555 FAM174AQ8TBP5 190 aa17.5■□□□□ 0.39
PTCHD3-202ENST00000622555 ASZ1Q8WWH4 475 aa17.5■□□□□ 0.39
PTCHD3-202ENST00000622555 KLHDC7BQ96G42 594 aa17.5■□□□□ 0.39
PTCHD3-202ENST00000622555 LINC00615Q96LM1 132 aaPredicted RBP17.5■□□□□ 0.39
PTCHD3-202ENST00000622555 GPR78Q96P69 363 aa17.5■□□□□ 0.39
PTCHD3-202ENST00000622555 DERL2Q9GZP9 239 aa17.5■□□□□ 0.39
PTCHD3-202ENST00000622555 MLXIPLQ9NP71 852 aa17.5■□□□□ 0.39
PTCHD3-202ENST00000622555 KLQ9UEF7 1012 aa17.5■□□□□ 0.39
PTCHD3-202ENST00000622555 SUFUQ9UMX1 484 aa17.5■□□□□ 0.39
PTCHD3-202ENST00000622555 LRP4O75096 1905 aa17.5■□□□□ 0.39
PTCHD3-202ENST00000622555 GPR37L1O60883 481 aa17.5■□□□□ 0.39
PTCHD3-202ENST00000622555 TSPAN12O95859 305 aa17.5■□□□□ 0.39
PTCHD3-202ENST00000622555 FUCA1P04066 466 aa17.5■□□□□ 0.39
PTCHD3-202ENST00000622555 GSTM1P09488 218 aa17.5■□□□□ 0.39
PTCHD3-202ENST00000622555 CD1DP15813 335 aa17.5■□□□□ 0.39
PTCHD3-202ENST00000622555 CHN1P15882 459 aa17.5■□□□□ 0.39
PTCHD3-202ENST00000622555 GNPDA1P46926 289 aa17.5■□□□□ 0.39
PTCHD3-202ENST00000622555 HNRNPH2P55795 449 aaKnown RBP17.5■□□□□ 0.39
PTCHD3-202ENST00000622555 RACK1P63244 317 aaKnown RBP17.5■□□□□ 0.39
PTCHD3-202ENST00000622555 IRX4P78413 519 aa17.5■□□□□ 0.39
PTCHD3-202ENST00000622555 GSTM4Q03013 218 aa17.5■□□□□ 0.39
PTCHD3-202ENST00000622555 LRRC8EQ6NSJ5 796 aa17.5■□□□□ 0.39
PTCHD3-202ENST00000622555 C11orf96Q7Z7L8 435 aa17.5■□□□□ 0.39
PTCHD3-202ENST00000622555 SLC22A18ASQ8N1D0 253 aa17.5■□□□□ 0.39
PTCHD3-202ENST00000622555 TMEM159Q96B96 161 aa17.5■□□□□ 0.39
PTCHD3-202ENST00000622555 CYP4F12Q9HCS2 524 aa17.5■□□□□ 0.39
PTCHD3-202ENST00000622555 TM7SF3Q9NS93 570 aa17.5■□□□□ 0.39
PTCHD3-202ENST00000622555 EMCNQ9ULC0 261 aa17.5■□□□□ 0.39
PTCHD3-202ENST00000622555 ZFC3H1O60293 1989 aaKnown RBP17.49■□□□□ 0.39
PTCHD3-202ENST00000622555 MGAT4DA6NG13 374 aa17.49■□□□□ 0.39
PTCHD3-202ENST00000622555 ZBTB14O43829 449 aa17.49■□□□□ 0.39
PTCHD3-202ENST00000622555 PLIN3O60664 434 aa17.49■□□□□ 0.39
PTCHD3-202ENST00000622555 CBSLP0DN79 551 aa17.49■□□□□ 0.39
PTCHD3-202ENST00000622555 TFEBP19484 476 aa17.49■□□□□ 0.39
PTCHD3-202ENST00000622555 CD38P28907 300 aa17.49■□□□□ 0.39
PTCHD3-202ENST00000622555 CBSP35520 551 aa17.49■□□□□ 0.39
PTCHD3-202ENST00000622555 ARHGAP8P85298 464 aa17.49■□□□□ 0.39
PTCHD3-202ENST00000622555 PTK2BQ14289 1009 aa17.49■□□□□ 0.39
PTCHD3-202ENST00000622555 LVRNQ6Q4G3 990 aa17.49■□□□□ 0.39
PTCHD3-202ENST00000622555 PIWIL4Q7Z3Z4 852 aaKnown RBP17.49■□□□□ 0.39
PTCHD3-202ENST00000622555 AMZ2Q86W34 360 aa17.49■□□□□ 0.39
PTCHD3-202ENST00000622555 CFAP206Q8IYR0 622 aa17.49■□□□□ 0.39
PTCHD3-202ENST00000622555 MYO1HQ8N1T3 1032 aa17.49■□□□□ 0.39
PTCHD3-202ENST00000622555 LILRA3Q8N6C8 439 aaPredicted RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms