RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 RASAL1O95294 804 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 OTCP00480 354 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 ZNF23P17027 643 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 CA5AP35218 305 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 DYNC1I2Q13409 638 aaKnown RBP9.29□□□□□ -0.92
PDPN-212ENST00000621990 CDH18Q13634 790 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 GTF2H2Q13888 395 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 CRY1Q16526 586 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 C11orf91Q3C1V1 193 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 AASDHQ4L235 1098 aaPredicted RBP9.29□□□□□ -0.92
PDPN-212ENST00000621990 GTF2H2CQ6P1K8 395 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 DLEU7Q6UYE1 221 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 MACC1Q6ZN28 852 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 RBM44Q6ZP01 1051 aaKnown RBP9.29□□□□□ -0.92
PDPN-212ENST00000621990 FRA10AC1Q70Z53 315 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 GALNT13Q8IUC8 556 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 HID1Q8IV36 788 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 CMTR2Q8IYT2 770 aaKnown RBP9.29□□□□□ -0.92
PDPN-212ENST00000621990 MYO1HQ8N1T3 1032 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 DNAJB14Q8TBM8 379 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 HM13Q8TCT9 377 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 ACDQ96AP0 544 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 CDK15Q96Q40 435 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 KCTD14Q9BQ13 255 aaPredicted RBP9.29□□□□□ -0.92
PDPN-212ENST00000621990 TMEM79Q9BSE2 394 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 HAUS8Q9BT25 410 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 C1orf50Q9BV19 199 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 LRRC3Q9BY71 257 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 GRIP2Q9C0E4 1043 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 ZFYVE1Q9HBF4 777 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 IL26Q9NPH9 171 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 SLAMF8Q9P0V8 285 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 SUN2Q9UH99 717 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 ZNF639Q9UID6 485 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 NEUROG3Q9Y4Z2 214 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 ZFC3H1O60293 1989 aaKnown RBP9.29□□□□□ -0.92
PDPN-212ENST00000621990 MYOCOSA0A1B0GUC4 107 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 ARHGAP10A1A4S6 786 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 TRIM64CA6NLI5 447 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 TAPBPO15533 448 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 ZNF821O75541 412 aaPredicted RBP9.29□□□□□ -0.92
PDPN-212ENST00000621990 CTPS1P17812 591 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 ACRV1P26436 265 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 RFC2P35250 354 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 ALDH3B2P48448 385 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 TUBA4AP68366 448 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 KIAA0040Q15053 153 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 TAF12Q16514 161 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 TIGD2Q4W5G0 525 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 MPP7Q5T2T1 576 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 GPRC6AQ5T6X5 926 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 RETSATQ6NUM9 610 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 SCIMPQ6UWF3 145 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 FAM151BQ6UXP7 276 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 ANKRD33Q7Z3H0 272 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 METTL3Q86U44 580 aaKnown RBP9.29□□□□□ -0.92
PDPN-212ENST00000621990 PROSER1Q86XN7 944 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 SLC39A11Q8N1S5 342 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 CBARPQ8N350 705 aaPredicted RBP9.29□□□□□ -0.92
PDPN-212ENST00000621990 CBR4Q8N4T8 237 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 TSPAN14Q8NG11 270 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 OR4F6Q8NGB9 312 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 ZFP28Q8NHY6 868 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 METTL6Q8TCB7 284 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 CAPNS2Q96L46 248 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 LYSMD1Q96S90 227 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 C9orf16Q9BUW7 83 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 BOCQ9BWV1 1114 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 HIPK3Q9H422 1215 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 ZNF334Q9HCZ1 680 aaPredicted RBP9.29□□□□□ -0.92
PDPN-212ENST00000621990 SARS2Q9NP81 518 aaKnown RBP9.29□□□□□ -0.92
PDPN-212ENST00000621990 LATS2Q9NRM7 1088 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 ELOVL2Q9NXB9 296 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 AURKCQ9UQB9 309 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 MYRFQ9Y2G1 1151 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 FNDC3AQ9Y2H6 1198 aaKnown RBP9.29□□□□□ -0.92
PDPN-212ENST00000621990 INSL5Q9Y5Q6 135 aa9.29□□□□□ -0.92
PDPN-212ENST00000621990 PLXNB3Q9ULL4 1909 aa9.28□□□□□ -0.92
PDPN-212ENST00000621990 S100BP04271 92 aaPredicted RBP9.28□□□□□ -0.92
PDPN-212ENST00000621990 ETS2P15036 469 aa9.28□□□□□ -0.92
PDPN-212ENST00000621990 ATP6V1B1P15313 513 aa9.28□□□□□ -0.92
PDPN-212ENST00000621990 MYF6P23409 242 aa9.28□□□□□ -0.92
PDPN-212ENST00000621990 HRH2P25021 359 aa9.28□□□□□ -0.92
PDPN-212ENST00000621990 HTR6P50406 440 aa9.28□□□□□ -0.92
PDPN-212ENST00000621990 EPHB3P54753 998 aa9.28□□□□□ -0.92
PDPN-212ENST00000621990 C18orf21Q32NC0 220 aaPredicted RBP9.28□□□□□ -0.92
PDPN-212ENST00000621990 GPR33Q49SQ1 333 aa9.28□□□□□ -0.92
PDPN-212ENST00000621990 KCTD21Q4G0X4 260 aa9.28□□□□□ -0.92
PDPN-212ENST00000621990 TMTC4Q5T4D3 741 aa9.28□□□□□ -0.92
PDPN-212ENST00000621990 PTRHD1Q6GMV3 140 aaKnown RBP9.28□□□□□ -0.92
PDPN-212ENST00000621990 APCDD1Q8J025 514 aa9.28□□□□□ -0.92
PDPN-212ENST00000621990 CPXM2Q8N436 756 aa9.28□□□□□ -0.92
PDPN-212ENST00000621990 LKAAEAR1Q8TD35 194 aa9.28□□□□□ -0.92
PDPN-212ENST00000621990 HTATIP2Q9BUP3 242 aa9.28□□□□□ -0.92
PDPN-212ENST00000621990 TRIM8Q9BZR9 551 aa9.28□□□□□ -0.92
PDPN-212ENST00000621990 NSUN3Q9H649 340 aaKnown RBP9.28□□□□□ -0.92
PDPN-212ENST00000621990 RC3H2Q9HBD1 1191 aaKnown RBP9.28□□□□□ -0.92
PDPN-212ENST00000621990 RDH14Q9HBH5 336 aa9.28□□□□□ -0.92
PDPN-212ENST00000621990 INTS7Q9NVH2 962 aaKnown RBP9.28□□□□□ -0.92
PDPN-212ENST00000621990 PCDHB3Q9Y5E6 796 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms