RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 MACC1Q6ZN28 852 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 SLC43A3Q8NBI5 491 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 C3orf58Q8NDZ4 430 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 TRPV1Q8NER1 839 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 TWIST2Q8WVJ9 160 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 GAL3ST4Q96RP7 486 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 FEM1AQ9BSK4 669 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 ZSCAN5AQ9BUG6 496 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 NSUN3Q9H649 340 aaKnown RBP9.12□□□□□ -0.95
GGA3-223ENST00000621870 SAR1AQ9NR31 198 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 EIF2B3Q9NR50 452 aaKnown RBP9.12□□□□□ -0.95
GGA3-223ENST00000621870 TMEM59LQ9UK28 342 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 CORO1CQ9ULV4 474 aaPredicted RBP9.12□□□□□ -0.95
GGA3-223ENST00000621870 PCDHGA11Q9Y5H2 935 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 C2orf71A6NGG8 1288 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 PRR5-ARHGAP8B1AHC4 643 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 H3BNH8 94 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 AP3D1O14617 1153 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 PRKCHP24723 683 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 VIPR1P32241 457 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 ARHGAP8P85298 464 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 SRSF11Q05519 484 aaKnown RBP9.12□□□□□ -0.95
GGA3-223ENST00000621870 GTF2H2Q13888 395 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 NCF4Q15080 339 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 PAFAH1B3Q15102 231 aaKnown RBP9.12□□□□□ -0.95
GGA3-223ENST00000621870 DCAF12L1Q5VU92 463 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 GTF2H2CQ6P1K8 395 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 ISLR2Q6UXK2 745 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 SLC39A11Q8N1S5 342 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 WDTC1Q8N5D0 677 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 NAT14Q8WUY8 206 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 PIGKQ92643 395 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 PMEPA1Q969W9 287 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 C19orf60Q96EN9 201 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 KLHDC7BQ96G42 594 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 NECTIN4Q96NY8 510 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 LMAN2LQ9H0V9 348 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 TMEM248Q9NWD8 314 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 NUDT4Q9NZJ9 180 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 ANGPT4Q9Y264 503 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 COQ6Q9Y2Z9 468 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 COPG1Q9Y678 874 aaKnown RBP9.12□□□□□ -0.95
GGA3-223ENST00000621870 MYH14Q7Z406 1995 aaKnown RBP9.12□□□□□ -0.95
GGA3-223ENST00000621870 A0A0J9YVX5 310 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 FANCGO15287 622 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 LDB2O43679 373 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 KDELR3O43731 214 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 TULP3O75386 442 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 SIX3O95343 332 aaPredicted RBP9.12□□□□□ -0.95
GGA3-223ENST00000621870 MATN4O95460 622 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 HLA-DQA2P01906 255 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 TYRP1P17643 537 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 HSPA13P48723 471 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 MTAPQ13126 283 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 SULT1C3Q6IMI6 304 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 MRPL10Q7Z7H8 261 aaKnown RBP9.12□□□□□ -0.95
GGA3-223ENST00000621870 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.12□□□□□ -0.95
GGA3-223ENST00000621870 DHDDSQ86SQ9 333 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 SIX5Q8N196 739 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 CYP4Z2PQ8N1L4 340 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 ZNF276Q8N554 614 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 PQLC3Q8N755 202 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 BHLHE22Q8NFJ8 381 aaPredicted RBP9.12□□□□□ -0.95
GGA3-223ENST00000621870 MCCC1Q96RQ3 725 aaPredicted RBP9.12□□□□□ -0.95
GGA3-223ENST00000621870 TMEM79Q9BSE2 394 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 LINC00597Q9H2U6 94 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 INTS10Q9NVR2 710 aaKnown RBP9.12□□□□□ -0.95
GGA3-223ENST00000621870 SPATA6Q9NWH7 488 aaPredicted RBP9.12□□□□□ -0.95
GGA3-223ENST00000621870 CYTH4Q9UIA0 394 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 MKL2Q9ULH7 1088 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 VPS4AQ9UN37 437 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 SORCS3Q9UPU3 1222 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 SLC9A8Q9Y2E8 581 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 HCFC2Q9Y5Z7 792 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 KDM3BQ7LBC6 1761 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 A0A0J9YYE9 177 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 K7ERQ8 282 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 SLC25A12O75746 678 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 C8GP07360 202 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 TCEA1P23193 301 aaKnown RBP9.11□□□□□ -0.95
GGA3-223ENST00000621870 RPL4P36578 427 aaKnown RBP9.11□□□□□ -0.95
GGA3-223ENST00000621870 IFNGR2P38484 337 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 FEN1P39748 380 aaKnown RBP9.11□□□□□ -0.95
GGA3-223ENST00000621870 ANKRD46Q86W74 232 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 NAT8LQ8N9F0 302 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 PHF10Q8WUB8 498 aaKnown RBP9.11□□□□□ -0.95
GGA3-223ENST00000621870 OVCA2Q8WZ82 227 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 RELTQ969Z4 430 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 SPATA5L1Q9BVQ7 753 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 TPSD1Q9BZJ3 242 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 ALKBH4Q9NXW9 302 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 FNIP2Q9P278 1114 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 PGAP2Q9UHJ9 254 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 NCOR1O75376 2440 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 SLX4Q8IY92 1834 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 TRAFD1O14545 582 aaPredicted RBP9.11□□□□□ -0.95
GGA3-223ENST00000621870 GMFGO60234 142 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 NRP2O60462 931 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 SERPINB7O75635 380 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 APOA1P02647 267 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms