RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 PRB1P04280 392 aa17.6■□□□□ 0.41
SCAMP4-213ENST00000621748 AMD1P17707 334 aa17.6■□□□□ 0.41
SCAMP4-213ENST00000621748 PBLDP30039 288 aaPredicted RBP17.6■□□□□ 0.41
SCAMP4-213ENST00000621748 GPR18Q14330 331 aa17.6■□□□□ 0.41
SCAMP4-213ENST00000621748 OASLQ15646 514 aaKnown RBP17.6■□□□□ 0.41
SCAMP4-213ENST00000621748 METRNLQ641Q3 311 aa17.6■□□□□ 0.41
SCAMP4-213ENST00000621748 ANKS6Q68DC2 871 aa17.6■□□□□ 0.41
SCAMP4-213ENST00000621748 XKR5Q6UX68 686 aa17.6■□□□□ 0.41
SCAMP4-213ENST00000621748 VASH2Q86V25 355 aa17.6■□□□□ 0.41
SCAMP4-213ENST00000621748 PLXDC1Q8IUK5 500 aa17.6■□□□□ 0.41
SCAMP4-213ENST00000621748 KIF18AQ8NI77 898 aa17.6■□□□□ 0.41
SCAMP4-213ENST00000621748 JPH3Q8WXH2 748 aaPredicted RBP17.6■□□□□ 0.41
SCAMP4-213ENST00000621748 SLC39A7Q92504 469 aa17.6■□□□□ 0.41
SCAMP4-213ENST00000621748 LRRC45Q96CN5 670 aa17.6■□□□□ 0.41
SCAMP4-213ENST00000621748 ZNF514Q96K75 400 aaPredicted RBP17.6■□□□□ 0.41
SCAMP4-213ENST00000621748 DNAJC1Q96KC8 554 aaKnown RBP17.6■□□□□ 0.41
SCAMP4-213ENST00000621748 DDA1Q9BW61 102 aa17.6■□□□□ 0.41
SCAMP4-213ENST00000621748 FRMD8P1Q9BZ68 369 aaPredicted RBP17.6■□□□□ 0.41
SCAMP4-213ENST00000621748 RNF14Q9UBS8 474 aa17.6■□□□□ 0.41
SCAMP4-213ENST00000621748 CRLS1Q9UJA2 301 aa17.6■□□□□ 0.41
SCAMP4-213ENST00000621748 MN1Q10571 1320 aaPredicted RBP17.6■□□□□ 0.41
SCAMP4-213ENST00000621748 PIKFYVEQ9Y2I7 2098 aa17.59■□□□□ 0.41
SCAMP4-213ENST00000621748 MGAT4DA6NG13 374 aa17.59■□□□□ 0.41
SCAMP4-213ENST00000621748 PGRMC1O00264 195 aaKnown RBP17.59■□□□□ 0.41
SCAMP4-213ENST00000621748 FGGP02679 453 aa17.59■□□□□ 0.41
SCAMP4-213ENST00000621748 C9P02748 559 aa17.59■□□□□ 0.41
SCAMP4-213ENST00000621748 STIP1P31948 543 aaKnown RBP17.59■□□□□ 0.41
SCAMP4-213ENST00000621748 HADHAP40939 763 aa17.59■□□□□ 0.41
SCAMP4-213ENST00000621748 HALP42357 657 aa17.59■□□□□ 0.41
SCAMP4-213ENST00000621748 CDKN1CP49918 316 aaPredicted RBP17.59■□□□□ 0.41
SCAMP4-213ENST00000621748 MC2RQ01718 297 aa17.59■□□□□ 0.41
SCAMP4-213ENST00000621748 RHDQ02161 417 aa17.59■□□□□ 0.41
SCAMP4-213ENST00000621748 POU6F1Q14863 301 aa17.59■□□□□ 0.41
SCAMP4-213ENST00000621748 RPE65Q16518 533 aa17.59■□□□□ 0.41
SCAMP4-213ENST00000621748 P3H1Q32P28 736 aa17.59■□□□□ 0.41
SCAMP4-213ENST00000621748 KIAA1614Q5VZ46 1190 aa17.59■□□□□ 0.41
SCAMP4-213ENST00000621748 SNX20Q7Z614 316 aa17.59■□□□□ 0.41
SCAMP4-213ENST00000621748 RBM12BQ8IXT5 1001 aaKnown RBP17.59■□□□□ 0.41
SCAMP4-213ENST00000621748 NXPE1Q8N323 547 aa17.59■□□□□ 0.41
SCAMP4-213ENST00000621748 GPR150Q8NGU9 434 aa17.59■□□□□ 0.41
SCAMP4-213ENST00000621748 C1orf54Q8WWF1 131 aa17.59■□□□□ 0.41
SCAMP4-213ENST00000621748 RSC1A1Q92681 617 aa17.59■□□□□ 0.41
SCAMP4-213ENST00000621748 C9orf72Q96LT7 481 aa17.59■□□□□ 0.41
SCAMP4-213ENST00000621748 PCDHB11Q9Y5F2 797 aa17.59■□□□□ 0.41
SCAMP4-213ENST00000621748 EIF4E1BA6NMX2 242 aaKnown RBP17.58■□□□□ 0.4
SCAMP4-213ENST00000621748 STMND1H3BQB6 276 aa17.58■□□□□ 0.4
SCAMP4-213ENST00000621748 ERVH48-1M5A8F1 160 aa17.58■□□□□ 0.4
SCAMP4-213ENST00000621748 CAPN5O15484 640 aaPredicted RBP17.58■□□□□ 0.4
SCAMP4-213ENST00000621748 PSMD3O43242 534 aa17.58■□□□□ 0.4
SCAMP4-213ENST00000621748 PRSS56P0CW18 603 aa17.58■□□□□ 0.4
SCAMP4-213ENST00000621748 WT1P19544 449 aaPredicted RBP17.58■□□□□ 0.4
SCAMP4-213ENST00000621748 MC4RP32245 332 aa17.58■□□□□ 0.4
SCAMP4-213ENST00000621748 LEPRP48357 1165 aaKnown RBP17.58■□□□□ 0.4
SCAMP4-213ENST00000621748 COL9A2Q14055 689 aaPredicted RBP17.58■□□□□ 0.4
SCAMP4-213ENST00000621748 BCL7AQ4VC05 210 aa17.58■□□□□ 0.4
SCAMP4-213ENST00000621748 MANEAQ5SRI9 462 aa17.58■□□□□ 0.4
SCAMP4-213ENST00000621748 DCAF12Q5T6F0 453 aa17.58■□□□□ 0.4
SCAMP4-213ENST00000621748 PAPD7Q5XG87 772 aaKnown RBP17.58■□□□□ 0.4
SCAMP4-213ENST00000621748 PRUNE1Q86TP1 453 aa17.58■□□□□ 0.4
SCAMP4-213ENST00000621748 LSM14AQ8ND56 463 aaKnown RBP17.58■□□□□ 0.4
SCAMP4-213ENST00000621748 OR2L2Q8NH16 312 aa17.58■□□□□ 0.4
SCAMP4-213ENST00000621748 TTC9Q92623 222 aa17.58■□□□□ 0.4
SCAMP4-213ENST00000621748 NKD1Q969G9 470 aa17.58■□□□□ 0.4
SCAMP4-213ENST00000621748 ULK4Q96C45 1275 aa17.58■□□□□ 0.4
SCAMP4-213ENST00000621748 LINC00615Q96LM1 132 aaPredicted RBP17.58■□□□□ 0.4
SCAMP4-213ENST00000621748 TGM7Q96PF1 710 aa17.58■□□□□ 0.4
SCAMP4-213ENST00000621748 CTRCQ99895 268 aa17.58■□□□□ 0.4
SCAMP4-213ENST00000621748 ASPSCR1Q9BZE9 553 aa17.58■□□□□ 0.4
SCAMP4-213ENST00000621748 ETNK1Q9HBU6 452 aa17.58■□□□□ 0.4
SCAMP4-213ENST00000621748 APMAPQ9HDC9 416 aa17.58■□□□□ 0.4
SCAMP4-213ENST00000621748 NLE1Q9NVX2 485 aaPredicted RBP17.58■□□□□ 0.4
SCAMP4-213ENST00000621748 FAM8A1Q9UBU6 413 aa17.58■□□□□ 0.4
SCAMP4-213ENST00000621748 ZNF148Q9UQR1 794 aa17.58■□□□□ 0.4
SCAMP4-213ENST00000621748 ESPNB1AK53 854 aa17.57■□□□□ 0.4
SCAMP4-213ENST00000621748 H7C0S8 307 aa17.57■□□□□ 0.4
SCAMP4-213ENST00000621748 TK2O00142 265 aa17.57■□□□□ 0.4
SCAMP4-213ENST00000621748 URI1O94763 535 aaPredicted RBP17.57■□□□□ 0.4
SCAMP4-213ENST00000621748 IFNB1P01574 187 aa17.57■□□□□ 0.4
SCAMP4-213ENST00000621748 ANKRD34CP0C6C1 535 aa17.57■□□□□ 0.4
SCAMP4-213ENST00000621748 ETS1P14921 441 aa17.57■□□□□ 0.4
SCAMP4-213ENST00000621748 ITGALP20701 1170 aa17.57■□□□□ 0.4
SCAMP4-213ENST00000621748 RAB15P59190 212 aa17.57■□□□□ 0.4
SCAMP4-213ENST00000621748 SNX1Q13596 522 aa17.57■□□□□ 0.4
SCAMP4-213ENST00000621748 TUBB2AQ13885 445 aa17.57■□□□□ 0.4
SCAMP4-213ENST00000621748 SEPT6Q14141 434 aa17.57■□□□□ 0.4
SCAMP4-213ENST00000621748 SIX1Q15475 284 aaPredicted RBP17.57■□□□□ 0.4
SCAMP4-213ENST00000621748 LILRA3Q8N6C8 439 aaPredicted RBP17.57■□□□□ 0.4
SCAMP4-213ENST00000621748 SPDYE1Q8NFV5 336 aaPredicted RBP17.57■□□□□ 0.4
SCAMP4-213ENST00000621748 OR52K1Q8NGK4 314 aa17.57■□□□□ 0.4
SCAMP4-213ENST00000621748 ACTRT1Q8TDG2 376 aa17.57■□□□□ 0.4
SCAMP4-213ENST00000621748 DCUN1D1Q96GG9 259 aa17.57■□□□□ 0.4
SCAMP4-213ENST00000621748 CDKN2AIPNLQ96HQ2 116 aa17.57■□□□□ 0.4
SCAMP4-213ENST00000621748 CAPZA3Q96KX2 299 aa17.57■□□□□ 0.4
SCAMP4-213ENST00000621748 INSM2Q96T92 566 aaPredicted RBP17.57■□□□□ 0.4
SCAMP4-213ENST00000621748 COPS8Q99627 209 aa17.57■□□□□ 0.4
SCAMP4-213ENST00000621748 TUBB2BQ9BVA1 445 aa17.57■□□□□ 0.4
SCAMP4-213ENST00000621748 SPRY4Q9C004 299 aa17.57■□□□□ 0.4
SCAMP4-213ENST00000621748 WWP1Q9H0M0 922 aa17.57■□□□□ 0.4
SCAMP4-213ENST00000621748 FBXO8Q9NRD0 319 aa17.57■□□□□ 0.4
SCAMP4-213ENST00000621748 CFAP20Q9Y6A4 193 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms