RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 HSPA7P48741 367 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 PRMT2P55345 433 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 RUNX1T1Q06455 604 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 PCBP2Q15366 365 aaKnown RBP eCLIP8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 MPPE1Q53F39 396 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 OGFRL1Q5TC84 451 aaPredicted RBP8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 SLC22A9Q8IVM8 553 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 HDDC3Q8N4P3 179 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 CNTD1Q8N815 330 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 USP7Q93009 1102 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 ACBD6Q9BR61 282 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 ZC4H2Q9NQZ6 224 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 FKBPLQ9UIM3 349 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 MTF2Q9Y483 593 aaPredicted RBP8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 DNAH12Q6ZR08 3092 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 PNMA8CA0A1B0GUJ8 204 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 SLCO1B7G3V0H7 640 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 SAP18O00422 153 aaKnown RBP8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 HS6ST1O60243 411 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 DNAJA2O60884 412 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 CDH3P22223 829 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 MAPK1P28482 360 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 CTSOP43234 321 aaPredicted RBP8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 MAGEA12P43365 314 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 AFF1P51825 1210 aaKnown RBP8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 GALNT2Q10471 571 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 MADCAM1Q13477 382 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 ZNF423Q2M1K9 1284 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 C11orf91Q3C1V1 193 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 GPAT3Q53EU6 434 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 FAM219BQ5XKK7 198 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 KCTD11Q693B1 232 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 ZFP1Q6P2D0 407 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 UGT2A3Q6UWM9 527 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 CATSPER1Q8NEC5 780 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 HEXDCQ8WVB3 486 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 NT5C3BQ969T7 300 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 RERGQ96A58 199 aaPredicted RBP8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 TMEM209Q96SK2 561 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 SLC9A7Q96T83 725 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 ZBTB26Q9HCK0 441 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 TMEM30AQ9NV96 361 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 UBAP1Q9NZ09 502 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 CROTQ9UKG9 612 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 PSME2Q9UL46 239 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 YIPF1Q9Y548 306 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 AURKAO14965 403 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 FGF18O76093 207 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 RPN2P04844 631 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 PABPC4LP0CB38 370 aaKnown RBP8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 ACP5P13686 325 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 RPL5P46777 297 aaKnown RBP8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 PSME3P61289 254 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 CAP1Q01518 475 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 USP39Q53GS9 565 aaKnown RBP8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 PIGGQ5H8A4 983 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 ARMC3Q5W041 872 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 TRIM74Q86UV6 250 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 ANKRD46Q86W74 232 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 PHYKPLQ8IUZ5 450 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 FAM20CQ8IXL6 584 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 TXNDC5Q8NBS9 432 aaKnown RBP8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 RDH11Q8TC12 318 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 STYXQ8WUJ0 223 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 XAGE5Q8WWM1 108 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 KCTD13Q8WZ19 329 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 NTAN1Q96AB6 310 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 CCDC28BQ9BUN5 200 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 RIBC2Q9H4K1 309 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 PHPT1Q9NRX4 125 aaPredicted RBP8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 SCN3BQ9NY72 215 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 TLL2Q9Y6L7 1015 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 GLYATL1P3A0A0U1RQE8 302 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 A0A0U1RQF3 1178 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 NPEPPSL1A6NEC2 478 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 OR6A2O95222 327 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 FAM58BPP0C7Q3 252 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 ACVRL1P37023 503 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 DPP6P42658 865 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 PTPRCAPQ14761 206 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 ZNF542PQ5EBM4 170 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 CLEC6AQ6EIG7 209 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 AMIGO2Q86SJ2 522 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 CPNE9Q8IYJ1 553 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 FAM46DQ8NEK8 389 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 ARMC5Q96C12 935 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 SLC27A6Q9Y2P4 619 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 IQCMA0A1B0GVH7 501 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 A0A1B0GVM2 712 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 SMIM31A0A1B0GVY4 71 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 TCAF2A6NFQ2 919 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 TNFRSF10BO14763 440 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 GRM6O15303 877 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 TNFAIP8O95379 198 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 NR2F1P10589 423 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 LRPAP1P30533 357 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 GJA5P36382 358 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 RPL34P49207 117 aaKnown RBP8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 NTHL1P78549 312 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 ILF3Q12906 894 aaKnown RBP eCLIP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms