RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 ACSL5Q9ULC5 683 aa17.93■□□□□ 0.46
LITAF-220ENST00000620789 PSMD13Q9UNM6 376 aa17.93■□□□□ 0.46
LITAF-220ENST00000620789 UTP11Q9Y3A2 253 aaKnown RBP17.93■□□□□ 0.46
LITAF-220ENST00000620789 MSRB2Q9Y3D2 182 aa17.93■□□□□ 0.46
LITAF-220ENST00000620789 COL27A1Q8IZC6 1860 aaPredicted RBP17.92■□□□□ 0.46
LITAF-220ENST00000620789 AKAP13Q12802 2813 aa17.92■□□□□ 0.46
LITAF-220ENST00000620789 A0A1W2PQM1 296 aa17.92■□□□□ 0.46
LITAF-220ENST00000620789 OR52A4PA6NMU1 304 aa17.92■□□□□ 0.46
LITAF-220ENST00000620789 ZW10O43264 779 aa17.92■□□□□ 0.46
LITAF-220ENST00000620789 FTH1P02794 183 aa17.92■□□□□ 0.46
LITAF-220ENST00000620789 ALDH4A1P30038 563 aa17.92■□□□□ 0.46
LITAF-220ENST00000620789 ARL4CP56559 192 aa17.92■□□□□ 0.46
LITAF-220ENST00000620789 OR1D5P58170 312 aa17.92■□□□□ 0.46
LITAF-220ENST00000620789 CALCOCO2Q13137 446 aa17.92■□□□□ 0.46
LITAF-220ENST00000620789 SPIDRQ14159 915 aa17.92■□□□□ 0.46
LITAF-220ENST00000620789 CLCA4Q14CN2 919 aa17.92■□□□□ 0.46
LITAF-220ENST00000620789 TYSND1Q2T9J0 566 aa17.92■□□□□ 0.46
LITAF-220ENST00000620789 ZNF658BQ4V348 819 aaPredicted RBP17.92■□□□□ 0.46
LITAF-220ENST00000620789 NEPROQ6NW34 567 aa17.92■□□□□ 0.46
LITAF-220ENST00000620789 CCNI2Q6ZMN8 369 aaPredicted RBP17.92■□□□□ 0.46
LITAF-220ENST00000620789 RBM44Q6ZP01 1051 aaKnown RBP17.92■□□□□ 0.46
LITAF-220ENST00000620789 SDCCAG8Q86SQ7 713 aaPredicted RBP17.92■□□□□ 0.46
LITAF-220ENST00000620789 MARCH9Q86YJ5 346 aa17.92■□□□□ 0.46
LITAF-220ENST00000620789 CFAP206Q8IYR0 622 aa17.92■□□□□ 0.46
LITAF-220ENST00000620789 LILRA3Q8N6C8 439 aaPredicted RBP17.92■□□□□ 0.46
LITAF-220ENST00000620789 SH3KBP1Q96B97 665 aa17.92■□□□□ 0.46
LITAF-220ENST00000620789 GFM1Q96RP9 751 aaKnown RBP17.92■□□□□ 0.46
LITAF-220ENST00000620789 NAT9Q9BTE0 207 aa17.92■□□□□ 0.46
LITAF-220ENST00000620789 RAB17Q9H0T7 212 aa17.92■□□□□ 0.46
LITAF-220ENST00000620789 IL1RAPL1Q9NZN1 696 aa17.92■□□□□ 0.46
LITAF-220ENST00000620789 ZNF624Q9P2J8 865 aaPredicted RBP17.92■□□□□ 0.46
LITAF-220ENST00000620789 FAM169AQ9Y6X4 670 aa17.92■□□□□ 0.46
LITAF-220ENST00000620789 F8W8V4 182 aa17.91■□□□□ 0.46
LITAF-220ENST00000620789 PRMT5O14744 637 aaPredicted RBP17.91■□□□□ 0.46
LITAF-220ENST00000620789 PFDN6O15212 129 aa17.91■□□□□ 0.46
LITAF-220ENST00000620789 B4GAT1O43505 415 aa17.91■□□□□ 0.46
LITAF-220ENST00000620789 NDUFS3O75489 264 aa17.91■□□□□ 0.46
LITAF-220ENST00000620789 TTC4O95801 387 aa17.91■□□□□ 0.46
LITAF-220ENST00000620789 VIPP01282 170 aa17.91■□□□□ 0.46
LITAF-220ENST00000620789 OGNP20774 298 aaKnown RBP17.91■□□□□ 0.46
LITAF-220ENST00000620789 SLC19A1P41440 591 aa17.91■□□□□ 0.46
LITAF-220ENST00000620789 TARDBPQ13148 414 aaKnown RBP eCLIP17.91■□□□□ 0.46
LITAF-220ENST00000620789 CRYMQ14894 314 aa17.91■□□□□ 0.46
LITAF-220ENST00000620789 LONRF1Q17RB8 773 aa17.91■□□□□ 0.46
LITAF-220ENST00000620789 RNF187Q5TA31 235 aaPredicted RBP17.91■□□□□ 0.46
LITAF-220ENST00000620789 C8orf74Q6P047 294 aa17.91■□□□□ 0.46
LITAF-220ENST00000620789 IGDCC3Q8IVU1 814 aa17.91■□□□□ 0.46
LITAF-220ENST00000620789 TRIM48Q8IWZ4 208 aa17.91■□□□□ 0.46
LITAF-220ENST00000620789 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.91■□□□□ 0.46
LITAF-220ENST00000620789 MNS1Q8NEH6 495 aa17.91■□□□□ 0.46
LITAF-220ENST00000620789 LRRC39Q96DD0 335 aa17.91■□□□□ 0.46
LITAF-220ENST00000620789 CXorf40BQ96DE9 158 aa17.91■□□□□ 0.46
LITAF-220ENST00000620789 DEPDC7Q96QD5 511 aa17.91■□□□□ 0.46
LITAF-220ENST00000620789 TCF12Q99081 682 aa17.91■□□□□ 0.46
LITAF-220ENST00000620789 SLC38A3Q99624 504 aa17.91■□□□□ 0.46
LITAF-220ENST00000620789 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.91■□□□□ 0.46
LITAF-220ENST00000620789 WWP1Q9H0M0 922 aa17.91■□□□□ 0.46
LITAF-220ENST00000620789 COG4Q9H9E3 785 aa17.91■□□□□ 0.46
LITAF-220ENST00000620789 POT1Q9NUX5 634 aa17.91■□□□□ 0.46
LITAF-220ENST00000620789 GRHL1Q9NZI5 618 aa17.91■□□□□ 0.46
LITAF-220ENST00000620789 PIKFYVEQ9Y2I7 2098 aa17.91■□□□□ 0.46
LITAF-220ENST00000620789 D6RAR5 112 aa17.9■□□□□ 0.46
LITAF-220ENST00000620789 SLC35G4P0C7Q5 338 aa17.9■□□□□ 0.46
LITAF-220ENST00000620789 ELK3P41970 407 aa17.9■□□□□ 0.46
LITAF-220ENST00000620789 THOC5Q13769 683 aaKnown RBP17.9■□□□□ 0.46
LITAF-220ENST00000620789 RPE65Q16518 533 aa17.9■□□□□ 0.46
LITAF-220ENST00000620789 SPANXN3Q5MJ09 141 aa17.9■□□□□ 0.46
LITAF-220ENST00000620789 LRRC6Q86X45 466 aa17.9■□□□□ 0.46
LITAF-220ENST00000620789 ZNF761Q86XN6 746 aaPredicted RBP17.9■□□□□ 0.46
LITAF-220ENST00000620789 CILP2Q8IUL8 1156 aa17.9■□□□□ 0.46
LITAF-220ENST00000620789 LMNTD2Q8IXW0 634 aa17.9■□□□□ 0.46
LITAF-220ENST00000620789 P2RY12Q9H244 342 aa17.9■□□□□ 0.46
LITAF-220ENST00000620789 UCK1Q9HA47 277 aa17.9■□□□□ 0.46
LITAF-220ENST00000620789 C20orf96Q9NUD7 363 aaPredicted RBP17.9■□□□□ 0.46
LITAF-220ENST00000620789 KCNK4Q9NYG8 393 aa17.9■□□□□ 0.46
LITAF-220ENST00000620789 TEX264Q9Y6I9 313 aa17.9■□□□□ 0.46
LITAF-220ENST00000620789 IGHV1OR21-1A0A087WYE8 117 aa17.89■□□□□ 0.45
LITAF-220ENST00000620789 UBA6A0AVT1 1052 aaPredicted RBP17.89■□□□□ 0.45
LITAF-220ENST00000620789 CTAGE15A4D2H0 777 aa17.89■□□□□ 0.45
LITAF-220ENST00000620789 LILRA5A6NI73 299 aa17.89■□□□□ 0.45
LITAF-220ENST00000620789 E7ESA3 106 aa17.89■□□□□ 0.45
LITAF-220ENST00000620789 LIN7AO14910 233 aaPredicted RBP17.89■□□□□ 0.45
LITAF-220ENST00000620789 CSO75390 466 aaKnown RBP17.89■□□□□ 0.45
LITAF-220ENST00000620789 CTAGE8P0CG41 777 aa17.89■□□□□ 0.45
LITAF-220ENST00000620789 RPS3P23396 243 aaKnown RBP eCLIP17.89■□□□□ 0.451e-8■□□□□ 9.8
LITAF-220ENST00000620789 CD1CP29017 333 aa17.89■□□□□ 0.45
LITAF-220ENST00000620789 PDX1P52945 283 aa17.89■□□□□ 0.45
LITAF-220ENST00000620789 GPLD1P80108 840 aa17.89■□□□□ 0.45
LITAF-220ENST00000620789 RPA4Q13156 261 aa17.89■□□□□ 0.45
LITAF-220ENST00000620789 CBLBQ13191 982 aa17.89■□□□□ 0.45
LITAF-220ENST00000620789 ISXQ2M1V0 245 aa17.89■□□□□ 0.45
LITAF-220ENST00000620789 AMZ1Q400G9 498 aa17.89■□□□□ 0.45
LITAF-220ENST00000620789 ZNF470Q6ECI4 717 aa17.89■□□□□ 0.45
LITAF-220ENST00000620789 ZNF449Q6P9G9 518 aa17.89■□□□□ 0.45
LITAF-220ENST00000620789 CENPUQ71F23 418 aa17.89■□□□□ 0.45
LITAF-220ENST00000620789 CTAGE6Q86UF2 777 aa17.89■□□□□ 0.45
LITAF-220ENST00000620789 CTAGE4Q8IX94 777 aa17.89■□□□□ 0.45
LITAF-220ENST00000620789 RBM12BQ8IXT5 1001 aaKnown RBP17.89■□□□□ 0.45
LITAF-220ENST00000620789 MMGT1Q8N4V1 131 aa17.89■□□□□ 0.45
LITAF-220ENST00000620789 SPDYE1Q8NFV5 336 aaPredicted RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms