RNA–Protein interactions for RNA: ENST00000620424.1

SYNRG-228, Transcript of synergin gamma, humanhuman

TSL 3

Gene SYNRG, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-228ENST00000620424 WASH6PQ9NQA3 447 aa9.28□□□□□ -0.92
SYNRG-228ENST00000620424 TREX1Q9NSU2 369 aa9.28□□□□□ -0.92
SYNRG-228ENST00000620424 RYDENQ9NUL5 291 aaKnown RBP9.28□□□□□ -0.92
SYNRG-228ENST00000620424 PISDQ9UG56 409 aa9.28□□□□□ -0.92
SYNRG-228ENST00000620424 RALYQ9UKM9 306 aaKnown RBP9.28□□□□□ -0.92
SYNRG-228ENST00000620424 LOXL2Q9Y4K0 774 aa9.28□□□□□ -0.92
SYNRG-228ENST00000620424 LILRA5A6NI73 299 aa9.27□□□□□ -0.93
SYNRG-228ENST00000620424 CES2O00748 559 aa9.27□□□□□ -0.93
SYNRG-228ENST00000620424 GAS8O95995 478 aa9.27□□□□□ -0.93
SYNRG-228ENST00000620424 VIPP01282 170 aa9.27□□□□□ -0.93
SYNRG-228ENST00000620424 TCP1P17987 556 aaKnown RBP9.27□□□□□ -0.93
SYNRG-228ENST00000620424 VCLP18206 1134 aa9.27□□□□□ -0.93
SYNRG-228ENST00000620424 ITGB6P18564 788 aa9.27□□□□□ -0.93
SYNRG-228ENST00000620424 PDHA2P29803 388 aa9.27□□□□□ -0.93
SYNRG-228ENST00000620424 EIF2S3P41091 472 aaKnown RBP9.27□□□□□ -0.93
SYNRG-228ENST00000620424 PREPP48147 710 aa9.27□□□□□ -0.93
SYNRG-228ENST00000620424 PPM1FP49593 454 aaPredicted RBP9.27□□□□□ -0.93
SYNRG-228ENST00000620424 LIMK2P53671 638 aa9.27□□□□□ -0.93
SYNRG-228ENST00000620424 PPP1CAP62136 330 aa9.27□□□□□ -0.93
SYNRG-228ENST00000620424 MRPS25P82663 173 aaKnown RBP9.27□□□□□ -0.93
SYNRG-228ENST00000620424 SQSTM1Q13501 440 aa9.27□□□□□ -0.93
SYNRG-228ENST00000620424 PCID2Q5JVF3 399 aa9.27□□□□□ -0.93
SYNRG-228ENST00000620424 LRRC8BQ6P9F7 803 aa9.27□□□□□ -0.93
SYNRG-228ENST00000620424 AFTPHQ6ULP2 937 aa9.27□□□□□ -0.93
SYNRG-228ENST00000620424 C4orf22Q6V702 233 aa9.27□□□□□ -0.93
SYNRG-228ENST00000620424 RAB11FIP2Q7L804 512 aa9.27□□□□□ -0.93
SYNRG-228ENST00000620424 TRIM48Q8IWZ4 208 aa9.27□□□□□ -0.93
SYNRG-228ENST00000620424 KLHL7Q8IXQ5 586 aa9.27□□□□□ -0.93
SYNRG-228ENST00000620424 CFAP206Q8IYR0 622 aa9.27□□□□□ -0.93
SYNRG-228ENST00000620424 FBXO39Q8N4B4 442 aa9.27□□□□□ -0.93
SYNRG-228ENST00000620424 OR6P1Q8NGX9 317 aa9.27□□□□□ -0.93
SYNRG-228ENST00000620424 OR2L2Q8NH16 312 aa9.27□□□□□ -0.93
SYNRG-228ENST00000620424 OR4L1Q8NH43 312 aa9.27□□□□□ -0.93
SYNRG-228ENST00000620424 OR10G6Q8NH81 332 aa9.27□□□□□ -0.93
SYNRG-228ENST00000620424 LKAAEAR1Q8TD35 194 aa9.27□□□□□ -0.93
SYNRG-228ENST00000620424 HNRNPLLQ8WVV9 542 aaKnown RBP9.27□□□□□ -0.93
SYNRG-228ENST00000620424 NCSTNQ92542 709 aa9.27□□□□□ -0.93
SYNRG-228ENST00000620424 RSC1A1Q92681 617 aa9.27□□□□□ -0.93
SYNRG-228ENST00000620424 CXorf40BQ96DE9 158 aa9.27□□□□□ -0.93
SYNRG-228ENST00000620424 RNF31Q96EP0 1072 aa9.27□□□□□ -0.93
SYNRG-228ENST00000620424 MFSD3Q96ES6 412 aa9.27□□□□□ -0.93
SYNRG-228ENST00000620424 LINC00615Q96LM1 132 aaPredicted RBP9.27□□□□□ -0.93
SYNRG-228ENST00000620424 SLC46A1Q96NT5 459 aa9.27□□□□□ -0.93
SYNRG-228ENST00000620424 NAP1L3Q99457 506 aaPredicted RBP9.27□□□□□ -0.93
SYNRG-228ENST00000620424 STRADBQ9C0K7 418 aa9.27□□□□□ -0.93
SYNRG-228ENST00000620424 IMP3Q9NV31 184 aaKnown RBP9.27□□□□□ -0.93
SYNRG-228ENST00000620424 KLHL3Q9UH77 587 aa9.27□□□□□ -0.93
SYNRG-228ENST00000620424 RIMKLBQ9ULI2 386 aa9.27□□□□□ -0.93
SYNRG-228ENST00000620424 DNMT3AQ9Y6K1 912 aaPredicted RBP9.27□□□□□ -0.93
SYNRG-228ENST00000620424 OR5K4A6NMS3 321 aa9.26□□□□□ -0.93
SYNRG-228ENST00000620424 IQCF5A8MTL0 148 aa9.26□□□□□ -0.93
SYNRG-228ENST00000620424 CDRT15L2A8MXV6 281 aa9.26□□□□□ -0.93
SYNRG-228ENST00000620424 CFAP99D6REC4 459 aa9.26□□□□□ -0.93
SYNRG-228ENST00000620424 GOLGA8KD6RF30 607 aa9.26□□□□□ -0.93
SYNRG-228ENST00000620424 GOLGA8TH3BQL2 631 aa9.26□□□□□ -0.93
SYNRG-228ENST00000620424 SNPHO15079 494 aa9.26□□□□□ -0.93
SYNRG-228ENST00000620424 DUX1O43812 170 aa9.26□□□□□ -0.93
SYNRG-228ENST00000620424 KIF1CO43896 1103 aaKnown RBP9.26□□□□□ -0.93
SYNRG-228ENST00000620424 BANF1O75531 89 aa9.26□□□□□ -0.93
SYNRG-228ENST00000620424 DXOO77932 396 aaKnown RBP9.26□□□□□ -0.93
SYNRG-228ENST00000620424 THRAP10827 490 aa9.26□□□□□ -0.93
SYNRG-228ENST00000620424 RALBP11234 206 aa9.26□□□□□ -0.93
SYNRG-228ENST00000620424 MTHFD1P11586 935 aaKnown RBP9.26□□□□□ -0.93
SYNRG-228ENST00000620424 SLC2A4P14672 509 aa9.26□□□□□ -0.93
SYNRG-228ENST00000620424 LEPRP48357 1165 aaKnown RBP9.26□□□□□ -0.93
SYNRG-228ENST00000620424 NPY2RP49146 381 aa9.26□□□□□ -0.93
SYNRG-228ENST00000620424 FNTAP49354 379 aa9.26□□□□□ -0.93
SYNRG-228ENST00000620424 GPLD1P80108 840 aa9.26□□□□□ -0.93
SYNRG-228ENST00000620424 BRD3Q15059 726 aa9.26□□□□□ -0.93
SYNRG-228ENST00000620424 CAPRIN2Q6IMN6 1127 aaKnown RBP9.26□□□□□ -0.93
SYNRG-228ENST00000620424 TMEM71Q6P5X7 295 aa9.26□□□□□ -0.93
SYNRG-228ENST00000620424 JAMLQ86YT9 394 aa9.26□□□□□ -0.93
SYNRG-228ENST00000620424 NAT8LQ8N9F0 302 aa9.26□□□□□ -0.93
SYNRG-228ENST00000620424 OR4D9Q8NGE8 314 aa9.26□□□□□ -0.93
SYNRG-228ENST00000620424 SNIP1Q8TAD8 396 aaKnown RBP9.26□□□□□ -0.93
SYNRG-228ENST00000620424 FGF11Q92914 225 aa9.26□□□□□ -0.93
SYNRG-228ENST00000620424 SH3KBP1Q96B97 665 aa9.26□□□□□ -0.93
SYNRG-228ENST00000620424 GRAMD1AQ96CP6 724 aa9.26□□□□□ -0.93
SYNRG-228ENST00000620424 AHCYL2Q96HN2 611 aaKnown RBP9.26□□□□□ -0.93
SYNRG-228ENST00000620424 ZNF514Q96K75 400 aaPredicted RBP9.26□□□□□ -0.93
SYNRG-228ENST00000620424 C12orf66Q96MD2 445 aa9.26□□□□□ -0.93
SYNRG-228ENST00000620424 FCRL3Q96P31 734 aaPredicted RBP9.26□□□□□ -0.93
SYNRG-228ENST00000620424 TRIM51Q9BSJ1 452 aa9.26□□□□□ -0.93
SYNRG-228ENST00000620424 CCM2Q9BSQ5 444 aa9.26□□□□□ -0.93
SYNRG-228ENST00000620424 KIFC1Q9BW19 673 aa9.26□□□□□ -0.93
SYNRG-228ENST00000620424 IL22Q9GZX6 179 aa9.26□□□□□ -0.93
SYNRG-228ENST00000620424 ZMYND15Q9H091 742 aa9.26□□□□□ -0.93
SYNRG-228ENST00000620424 OR52A5Q9H2C5 316 aa9.26□□□□□ -0.93
SYNRG-228ENST00000620424 COG4Q9H9E3 785 aa9.26□□□□□ -0.93
SYNRG-228ENST00000620424 OCIAD1Q9NX40 245 aa9.26□□□□□ -0.93
SYNRG-228ENST00000620424 IL1RAPL1Q9NZN1 696 aa9.26□□□□□ -0.93
SYNRG-228ENST00000620424 BFARQ9NZS9 450 aa9.26□□□□□ -0.93
SYNRG-228ENST00000620424 FOXJ2Q9P0K8 574 aa9.26□□□□□ -0.93
SYNRG-228ENST00000620424 PCDHGA8Q9Y5G5 932 aa9.26□□□□□ -0.93
SYNRG-228ENST00000620424 FREM2Q5SZK8 3169 aa9.26□□□□□ -0.93
SYNRG-228ENST00000620424 DMXL2Q8TDJ6 3036 aa9.26□□□□□ -0.93
SYNRG-228ENST00000620424 CACNA1BQ00975 2339 aa9.25□□□□□ -0.93
SYNRG-228ENST00000620424 GOLGA6L10A0A0M3HER8 536 aa9.25□□□□□ -0.93
SYNRG-228ENST00000620424 CTAGE9A4FU28 777 aa9.25□□□□□ -0.93
SYNRG-228ENST00000620424 C9orf172C9J069 976 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms