RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 C21orf59P57076 290 aa21.28■■□□□ 1
SGMS1-210ENST00000619438 UBAP2LQ14157 1087 aaKnown RBP21.28■■□□□ 1
SGMS1-210ENST00000619438 FAM83EQ2M2I3 478 aa21.28■■□□□ 1
SGMS1-210ENST00000619438 SETMARQ53H47 684 aaPredicted RBP21.28■■□□□ 1
SGMS1-210ENST00000619438 IL27RAQ6UWB1 636 aa21.28■■□□□ 1
SGMS1-210ENST00000619438 ERMP1Q7Z2K6 904 aa21.28■■□□□ 1
SGMS1-210ENST00000619438 TRIM69Q86WT6 500 aa21.28■■□□□ 1
SGMS1-210ENST00000619438 RBM15BQ8NDT2 890 aaKnown RBP21.28■■□□□ 1
SGMS1-210ENST00000619438 OR2I1PQ8NGU4 316 aa21.28■■□□□ 1
SGMS1-210ENST00000619438 KLK6Q92876 244 aa21.28■■□□□ 1
SGMS1-210ENST00000619438 HDAC10Q969S8 669 aa21.28■■□□□ 1
SGMS1-210ENST00000619438 SLC6A18Q96N87 628 aa21.28■■□□□ 1
SGMS1-210ENST00000619438 CPEB1Q9BZB8 566 aaKnown RBP21.28■■□□□ 1
SGMS1-210ENST00000619438 IGSF5Q9NSI5 407 aa21.28■■□□□ 1
SGMS1-210ENST00000619438 VTI1BQ9UEU0 232 aa21.28■■□□□ 1
SGMS1-210ENST00000619438 L3MBTL1Q9Y468 752 aa21.28■■□□□ 1
SGMS1-210ENST00000619438 SPTBN2O15020 2390 aa21.27■■□□□ 1
SGMS1-210ENST00000619438 LATO43561 262 aa21.27■■□□□ 1
SGMS1-210ENST00000619438 WISP3O95389 354 aaPredicted RBP21.27■■□□□ 1
SGMS1-210ENST00000619438 S1PR4O95977 384 aa21.27■■□□□ 1
SGMS1-210ENST00000619438 XPAP23025 273 aaPredicted RBP21.27■■□□□ 1
SGMS1-210ENST00000619438 PSMA3P25788 255 aa21.27■■□□□ 1
SGMS1-210ENST00000619438 PRDX6P30041 224 aa21.27■■□□□ 1
SGMS1-210ENST00000619438 NUDT1P36639 197 aa21.27■■□□□ 1
SGMS1-210ENST00000619438 RPL14P50914 215 aaKnown RBP21.27■■□□□ 1
SGMS1-210ENST00000619438 PRAMEP78395 509 aa21.27■■□□□ 1
SGMS1-210ENST00000619438 NSUN2Q08J23 767 aaKnown RBP eCLIP21.27■■□□□ 1
SGMS1-210ENST00000619438 CFAP157Q5JU67 520 aa21.27■■□□□ 1
SGMS1-210ENST00000619438 AGAP9Q5VTM2 703 aa21.27■■□□□ 1
SGMS1-210ENST00000619438 SCG3Q8WXD2 468 aaKnown RBP21.27■■□□□ 1
SGMS1-210ENST00000619438 RAB7BQ96AH8 199 aa21.27■■□□□ 1
SGMS1-210ENST00000619438 CCDC126Q96EE4 140 aa21.27■■□□□ 1
SGMS1-210ENST00000619438 UBXN10Q96LJ8 280 aa21.27■■□□□ 1
SGMS1-210ENST00000619438 ORAI3Q9BRQ5 295 aa21.27■■□□□ 1
SGMS1-210ENST00000619438 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.27■■□□□ 19e-7■□□□□ 9.5
SGMS1-210ENST00000619438 TTC24A2A3L6 582 aaPredicted RBP21.26■□□□□ 0.99
SGMS1-210ENST00000619438 AURKAO14965 403 aa21.26■□□□□ 0.99
SGMS1-210ENST00000619438 HDAC3O15379 428 aa21.26■□□□□ 0.99
SGMS1-210ENST00000619438 SLC31A1O15431 190 aa21.26■□□□□ 0.99
SGMS1-210ENST00000619438 CR2P20023 1033 aa21.26■□□□□ 0.99
SGMS1-210ENST00000619438 ATP5F1P24539 256 aaPredicted RBP21.26■□□□□ 0.99
SGMS1-210ENST00000619438 CD38P28907 300 aa21.26■□□□□ 0.99
SGMS1-210ENST00000619438 PGM1P36871 562 aa21.26■□□□□ 0.99
SGMS1-210ENST00000619438 GLRBP48167 497 aa21.26■□□□□ 0.99
SGMS1-210ENST00000619438 SCNN1BP51168 640 aa21.26■□□□□ 0.99
SGMS1-210ENST00000619438 ARSDP51689 593 aa21.26■□□□□ 0.99
SGMS1-210ENST00000619438 ZNF460Q14592 562 aa21.26■□□□□ 0.99
SGMS1-210ENST00000619438 RBM20Q5T481 1227 aaKnown RBP21.26■□□□□ 0.99
SGMS1-210ENST00000619438 LAYNQ6UX15 382 aa21.26■□□□□ 0.99
SGMS1-210ENST00000619438 PIWIL4Q7Z3Z4 852 aaKnown RBP21.26■□□□□ 0.99
SGMS1-210ENST00000619438 HORMAD1Q86X24 394 aa21.26■□□□□ 0.99
SGMS1-210ENST00000619438 HEXDCQ8WVB3 486 aa21.26■□□□□ 0.99
SGMS1-210ENST00000619438 OLFM1Q99784 485 aa21.26■□□□□ 0.99
SGMS1-210ENST00000619438 SUV39H2Q9H5I1 410 aa21.26■□□□□ 0.99
SGMS1-210ENST00000619438 GAREM1Q9H706 876 aa21.26■□□□□ 0.99
SGMS1-210ENST00000619438 DCLRE1BQ9H816 532 aa21.26■□□□□ 0.99
SGMS1-210ENST00000619438 DMTF1Q9Y222 760 aa21.26■□□□□ 0.99
SGMS1-210ENST00000619438 VWA7Q9Y334 891 aa21.26■□□□□ 0.99
SGMS1-210ENST00000619438 FADS3Q9Y5Q0 445 aa21.26■□□□□ 0.99
SGMS1-210ENST00000619438 DIAPH2O60879 1101 aa21.25■□□□□ 0.99
SGMS1-210ENST00000619438 PIGNO95427 931 aa21.25■□□□□ 0.99
SGMS1-210ENST00000619438 ANP32DO95626 131 aa21.25■□□□□ 0.99
SGMS1-210ENST00000619438 LTA4HP09960 611 aaKnown RBP21.25■□□□□ 0.99
SGMS1-210ENST00000619438 NAGLUP54802 743 aa21.25■□□□□ 0.99
SGMS1-210ENST00000619438 KIF19Q2TAC6 998 aa21.25■□□□□ 0.99
SGMS1-210ENST00000619438 ZNF789Q5FWF6 425 aa21.25■□□□□ 0.99
SGMS1-210ENST00000619438 ARL13AQ5H913 290 aaPredicted RBP21.25■□□□□ 0.99
SGMS1-210ENST00000619438 TECRLQ5HYJ1 363 aa21.25■□□□□ 0.99
SGMS1-210ENST00000619438 HECTD2Q5U5R9 776 aa21.25■□□□□ 0.99
SGMS1-210ENST00000619438 OR6P1Q8NGX9 317 aa21.25■□□□□ 0.99
SGMS1-210ENST00000619438 ANKRD27Q96NW4 1050 aa21.25■□□□□ 0.99
SGMS1-210ENST00000619438 NUDCD1Q96RS6 583 aa21.25■□□□□ 0.99
SGMS1-210ENST00000619438 TACO1Q9BSH4 297 aaKnown RBP21.25■□□□□ 0.99
SGMS1-210ENST00000619438 ATP13A3Q9H7F0 1226 aa21.25■□□□□ 0.99
SGMS1-210ENST00000619438 PRAMEF26H0Y7S4 382 aa21.24■□□□□ 0.99
SGMS1-210ENST00000619438 TM7SF2O76062 418 aa21.24■□□□□ 0.99
SGMS1-210ENST00000619438 CER1O95813 267 aa21.24■□□□□ 0.99
SGMS1-210ENST00000619438 CHRNGP07510 517 aa21.24■□□□□ 0.99
SGMS1-210ENST00000619438 RBP1P09455 135 aa21.24■□□□□ 0.99
SGMS1-210ENST00000619438 TPBGLP0DKB5 382 aa21.24■□□□□ 0.99
SGMS1-210ENST00000619438 CPOXP36551 454 aa21.24■□□□□ 0.99
SGMS1-210ENST00000619438 CSNK1DP48730 415 aa21.24■□□□□ 0.99
SGMS1-210ENST00000619438 RPS21P63220 83 aaKnown RBP21.24■□□□□ 0.99
SGMS1-210ENST00000619438 ACAP2Q15057 778 aa21.24■□□□□ 0.99
SGMS1-210ENST00000619438 HLA-BQ31612 363 aa21.24■□□□□ 0.99
SGMS1-210ENST00000619438 VWA5B1Q5TIE3 1220 aa21.24■□□□□ 0.99
SGMS1-210ENST00000619438 FAM45BPQ6NSW5 357 aa21.24■□□□□ 0.99
SGMS1-210ENST00000619438 PTAR1Q7Z6K3 402 aaPredicted RBP21.24■□□□□ 0.99
SGMS1-210ENST00000619438 LSMEM2Q8N112 164 aa21.24■□□□□ 0.99
SGMS1-210ENST00000619438 FAM45AQ8TCE6 357 aa21.24■□□□□ 0.99
SGMS1-210ENST00000619438 CMTM5Q96DZ9 223 aa21.24■□□□□ 0.99
SGMS1-210ENST00000619438 ZNF641Q96N77 438 aaPredicted RBP21.24■□□□□ 0.99
SGMS1-210ENST00000619438 SNX11Q9Y5W9 270 aa21.24■□□□□ 0.99
SGMS1-210ENST00000619438 TM4SF5O14894 197 aa21.24■□□□□ 0.99
SGMS1-210ENST00000619438 VILLO15195 856 aa21.24■□□□□ 0.99
SGMS1-210ENST00000619438 SLC22A2O15244 555 aa21.24■□□□□ 0.99
SGMS1-210ENST00000619438 TSPAN6O43657 245 aa21.24■□□□□ 0.99
SGMS1-210ENST00000619438 AP1G1O43747 822 aa21.24■□□□□ 0.99
SGMS1-210ENST00000619438 GNAZP19086 355 aa21.24■□□□□ 0.99
SGMS1-210ENST00000619438 OGNP20774 298 aaKnown RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms