RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 SNAPC1Q16533 368 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 USP41Q3LFD5 358 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 XKR5Q6UX68 686 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 VWDEQ8N2E2 1590 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 CPSF7Q8N684 471 aaKnown RBP3.02□□□□□ -1.93
LPP-221ENST00000618621 YME1L1Q96TA2 773 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 HERPUD2Q9BSE4 406 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 EURLQ9NYK6 297 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 PAM16Q9Y3D7 125 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 RPL36Q9Y3U8 105 aaKnown RBP3.02□□□□□ -1.93
LPP-221ENST00000618621 PPRC1Q5VV67 1664 aaKnown RBP3.02□□□□□ -1.93
LPP-221ENST00000618621 KCNU1A8MYU2 1149 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 QSOX1O00391 747 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 TSPAN3O60637 253 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 NADKO95544 446 aaPredicted RBP3.02□□□□□ -1.93
LPP-221ENST00000618621 ECDO95905 644 aaPredicted RBP3.02□□□□□ -1.93
LPP-221ENST00000618621 CKBP12277 381 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 TNNI3P19429 210 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 IMPDH1P20839 514 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 PSMA1P25786 263 aaKnown RBP3.02□□□□□ -1.93
LPP-221ENST00000618621 TNFSF9P41273 254 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 SCN1BQ07699 218 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 CBLBQ13191 982 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 UGCGQ16739 394 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 FBXL19Q6PCT2 694 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 LINGO1Q96FE5 620 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 FTHL17Q9BXU8 183 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 RPF2Q9H7B2 306 aaKnown RBP3.02□□□□□ -1.93
LPP-221ENST00000618621 ZNF490Q9ULM2 529 aaPredicted RBP3.02□□□□□ -1.93
LPP-221ENST00000618621 SPATA31D1Q6ZQQ2 1576 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 FABP12A6NFH5 140 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 BTBD19C9JJ37 291 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 IFNA16P05015 189 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 PBLDP30039 288 aaPredicted RBP3.02□□□□□ -1.93
LPP-221ENST00000618621 TMBIM6P55061 237 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 BTN3A2P78410 334 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 IL18R1Q13478 541 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 C1orf220Q5T0J3 134 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 FAM46CQ5VWP2 391 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 FAM92BQ6ZTR7 304 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 SIAH1Q8IUQ4 282 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 KIAA0319LQ8IZA0 1049 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 MARVELD2Q8N4S9 558 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 NATD1Q8N6N6 113 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 SNIP1Q8TAD8 396 aaKnown RBP3.02□□□□□ -1.93
LPP-221ENST00000618621 CSGALNACT1Q8TDX6 532 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 CIDECQ96AQ7 238 aaPredicted RBP3.02□□□□□ -1.93
LPP-221ENST00000618621 MARK4Q96L34 752 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 ERMAPQ96PL5 475 aaPredicted RBP3.02□□□□□ -1.93
LPP-221ENST00000618621 IKZF3Q9UKT9 509 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 IQGAP1P46940 1657 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 MED13LQ71F56 2210 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 MAGEB3O15480 346 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 SLC7A4O43246 635 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 XYLBO75191 536 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 B3GALNT1O75752 331 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 CCNKO75909 580 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 BMP1P13497 986 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 AQP4P55087 323 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 PLEKHN1Q494U1 663 aaPredicted RBP3.02□□□□□ -1.93
LPP-221ENST00000618621 PIH1D2Q8WWB5 315 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 OSTF1Q92882 214 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 BTN2A3PQ96KV6 586 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 SNRNP25Q9BV90 132 aaKnown RBP3.02□□□□□ -1.93
LPP-221ENST00000618621 TMEM106CQ9BVX2 250 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.02□□□□□ -1.93
LPP-221ENST00000618621 DNAJB9Q9UBS3 223 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 ATP6V1HQ9UI12 483 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 TBC1D3BA6NDS4 549 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 CLDN5O00501 218 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 SLC22A1O15245 554 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 PGK1P00558 417 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 FYNP06241 537 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 IL4RP24394 825 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 CLK3P49761 638 aaKnown RBP3.02□□□□□ -1.93
LPP-221ENST00000618621 INHBEP58166 350 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 TIGD6Q17RP2 521 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 CHERPQ8IWX8 916 aaKnown RBP3.02□□□□□ -1.93
LPP-221ENST00000618621 FCRL5Q96RD9 977 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 CPXM1Q96SM3 734 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 B3GNT5Q9BYG0 378 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 NOL6Q9H6R4 1146 aaKnown RBP3.02□□□□□ -1.93
LPP-221ENST00000618621 ZMAT5Q9UDW3 170 aaKnown RBP3.02□□□□□ -1.93
LPP-221ENST00000618621 ZNF222Q9UK12 451 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 MKLN1Q9UL63 735 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 A0A0B4J203 849 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 H0YAE9 185 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 PPP1R2P9O14990 202 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 RFPL1O75677 317 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 AMHP03971 560 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 PRKCHP24723 683 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 ATP12AP54707 1039 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 TAS2R41P59536 307 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 CAPN13Q6MZZ7 669 aaPredicted RBP3.02□□□□□ -1.93
LPP-221ENST00000618621 FIP1L1Q6UN15 594 aaKnown RBP3.02□□□□□ -1.93
LPP-221ENST00000618621 UGT2A3Q6UWM9 527 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 ZNF730Q6ZMV8 503 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 BNIPLQ7Z465 357 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 RBFAQ8N0V3 343 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 NAT16Q8N8M0 369 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms