RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 GNASQ5JWF2 1037 aa20.12■□□□□ 0.81
NEK3-208ENST00000618534 RBM48Q5RL73 367 aaKnown RBP20.12■□□□□ 0.81
NEK3-208ENST00000618534 GTF2IRD2BQ6EKJ0 949 aa20.12■□□□□ 0.81
NEK3-208ENST00000618534 ALG1LQ6GMV1 187 aa20.12■□□□□ 0.81
NEK3-208ENST00000618534 ENPP6Q6UWR7 440 aa20.12■□□□□ 0.81
NEK3-208ENST00000618534 GTF2IRD2Q86UP8 949 aa20.12■□□□□ 0.81
NEK3-208ENST00000618534 ZDHHC13Q8IUH4 622 aa20.12■□□□□ 0.81
NEK3-208ENST00000618534 HS3ST5Q8IZT8 346 aa20.12■□□□□ 0.81
NEK3-208ENST00000618534 SPARTQ8N0X7 666 aa20.12■□□□□ 0.81
NEK3-208ENST00000618534 FIG4Q92562 907 aa20.12■□□□□ 0.81
NEK3-208ENST00000618534 B3GALT6Q96L58 329 aa20.12■□□□□ 0.81
NEK3-208ENST00000618534 C8orf48Q96LL4 319 aa20.12■□□□□ 0.81
NEK3-208ENST00000618534 MGME1Q9BQP7 344 aa20.12■□□□□ 0.81
NEK3-208ENST00000618534 C17orf80Q9BSJ5 609 aa20.12■□□□□ 0.81
NEK3-208ENST00000618534 HPS4Q9NQG7 708 aa20.12■□□□□ 0.81
NEK3-208ENST00000618534 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.12■□□□□ 0.81
NEK3-208ENST00000618534 GNPTGQ9UJJ9 305 aa20.12■□□□□ 0.81
NEK3-208ENST00000618534 TSR3Q9UJK0 312 aaKnown RBP20.12■□□□□ 0.81
NEK3-208ENST00000618534 PCDHGA8Q9Y5G5 932 aa20.12■□□□□ 0.81
NEK3-208ENST00000618534 SLC30A1Q9Y6M5 507 aa20.12■□□□□ 0.81
NEK3-208ENST00000618534 HOXD9P28356 352 aaPredicted RBP20.12■□□□□ 0.81
NEK3-208ENST00000618534 IL2P60568 153 aa20.12■□□□□ 0.81
NEK3-208ENST00000618534 RELAQ04206 551 aa20.12■□□□□ 0.81
NEK3-208ENST00000618534 SFSWAPQ12872 951 aaKnown RBP20.12■□□□□ 0.81
NEK3-208ENST00000618534 DSC3Q14574 896 aa20.12■□□□□ 0.81
NEK3-208ENST00000618534 NR6A1Q15406 480 aa20.12■□□□□ 0.81
NEK3-208ENST00000618534 GRAMD4Q6IC98 578 aa20.12■□□□□ 0.81
NEK3-208ENST00000618534 OR7D4Q8NG98 312 aa20.12■□□□□ 0.81
NEK3-208ENST00000618534 FBXO30Q8TB52 745 aa20.12■□□□□ 0.81
NEK3-208ENST00000618534 METTL6Q8TCB7 284 aa20.12■□□□□ 0.81
NEK3-208ENST00000618534 FBXO32Q969P5 355 aa20.12■□□□□ 0.81
NEK3-208ENST00000618534 ZNF583Q96ND8 569 aa20.12■□□□□ 0.81
NEK3-208ENST00000618534 MBOAT4Q96T53 435 aa20.12■□□□□ 0.81
NEK3-208ENST00000618534 BEGAINQ9BUH8 593 aa20.12■□□□□ 0.81
NEK3-208ENST00000618534 GPN2Q9H9Y4 310 aaPredicted RBP20.12■□□□□ 0.81
NEK3-208ENST00000618534 SARS2Q9NP81 518 aaKnown RBP20.12■□□□□ 0.81
NEK3-208ENST00000618534 TMEM45AQ9NWC5 275 aa20.12■□□□□ 0.81
NEK3-208ENST00000618534 SMPD4Q9NXE4 827 aa20.12■□□□□ 0.81
NEK3-208ENST00000618534 FKBPLQ9UIM3 349 aa20.12■□□□□ 0.81
NEK3-208ENST00000618534 C1orf232A0A0U1RR37 186 aa20.11■□□□□ 0.81
NEK3-208ENST00000618534 G3V2T6 193 aa20.11■□□□□ 0.81
NEK3-208ENST00000618534 ARNTLO00327 626 aa20.11■□□□□ 0.81
NEK3-208ENST00000618534 ANKRD28O15084 1053 aa20.11■□□□□ 0.81
NEK3-208ENST00000618534 DFNA5O60443 496 aa20.11■□□□□ 0.81
NEK3-208ENST00000618534 CLPXO76031 633 aa20.11■□□□□ 0.81
NEK3-208ENST00000618534 HTR1AP08908 422 aa20.11■□□□□ 0.81
NEK3-208ENST00000618534 GSTM2P28161 218 aa20.11■□□□□ 0.81
NEK3-208ENST00000618534 PIGAP37287 484 aa20.11■□□□□ 0.81
NEK3-208ENST00000618534 PIGFQ07326 219 aa20.11■□□□□ 0.81
NEK3-208ENST00000618534 PWP1Q13610 501 aa20.11■□□□□ 0.81
NEK3-208ENST00000618534 SKIV2LQ15477 1246 aaKnown RBP20.11■□□□□ 0.81
NEK3-208ENST00000618534 TAF1AQ15573 450 aaPredicted RBP20.11■□□□□ 0.81
NEK3-208ENST00000618534 ANKRD34AQ69YU3 496 aa20.11■□□□□ 0.81
NEK3-208ENST00000618534 SULT1C3Q6IMI6 304 aa20.11■□□□□ 0.81
NEK3-208ENST00000618534 PRR23BQ6ZRT6 265 aa20.11■□□□□ 0.81
NEK3-208ENST00000618534 CHPT1Q8WUD6 406 aa20.11■□□□□ 0.81
NEK3-208ENST00000618534 TRUB1Q8WWH5 349 aaKnown RBP20.11■□□□□ 0.81
NEK3-208ENST00000618534 PALMDQ9NP74 551 aa20.11■□□□□ 0.81
NEK3-208ENST00000618534 FAM118AQ9NWS6 357 aa20.11■□□□□ 0.81
NEK3-208ENST00000618534 UTS2RQ9UKP6 389 aa20.11■□□□□ 0.81
NEK3-208ENST00000618534 LSM1O15116 133 aaKnown RBP20.11■□□□□ 0.81
NEK3-208ENST00000618534 NOBOXO60393 691 aa20.11■□□□□ 0.81
NEK3-208ENST00000618534 HPRP00739 348 aa20.11■□□□□ 0.81
NEK3-208ENST00000618534 PAX3P23760 479 aa20.11■□□□□ 0.81
NEK3-208ENST00000618534 LAPTM5Q13571 262 aa20.11■□□□□ 0.81
NEK3-208ENST00000618534 MEP1AQ16819 746 aa20.11■□□□□ 0.81
NEK3-208ENST00000618534 ZNF280BQ86YH2 543 aa20.11■□□□□ 0.81
NEK3-208ENST00000618534 ATAD1Q8NBU5 361 aa20.11■□□□□ 0.81
NEK3-208ENST00000618534 CHDHQ8NE62 594 aaPredicted RBP20.11■□□□□ 0.81
NEK3-208ENST00000618534 HDAC2Q92769 488 aaKnown RBP20.11■□□□□ 0.81
NEK3-208ENST00000618534 AMBRA1Q9C0C7 1298 aa20.11■□□□□ 0.81
NEK3-208ENST00000618534 SELENONQ9NZV5 590 aa20.11■□□□□ 0.81
NEK3-208ENST00000618534 VAPAQ9P0L0 249 aa20.11■□□□□ 0.81
NEK3-208ENST00000618534 SCN10AQ9Y5Y9 1956 aa20.1■□□□□ 0.81
NEK3-208ENST00000618534 MOXD2PA6NHM9 499 aa20.1■□□□□ 0.81
NEK3-208ENST00000618534 CFAP99D6REC4 459 aa20.1■□□□□ 0.81
NEK3-208ENST00000618534 SULT1C4O75897 302 aa20.1■□□□□ 0.81
NEK3-208ENST00000618534 IGLV3-27P01718 113 aa20.1■□□□□ 0.81
NEK3-208ENST00000618534 CNPP09543 421 aaKnown RBP20.1■□□□□ 0.81
NEK3-208ENST00000618534 TACR2P21452 398 aa20.1■□□□□ 0.81
NEK3-208ENST00000618534 MC4RP32245 332 aa20.1■□□□□ 0.81
NEK3-208ENST00000618534 TPD52P55327 224 aaPredicted RBP20.1■□□□□ 0.81
NEK3-208ENST00000618534 PHEXP78562 749 aa20.1■□□□□ 0.81
NEK3-208ENST00000618534 CTU2Q2VPK5 515 aaKnown RBP20.1■□□□□ 0.81
NEK3-208ENST00000618534 NAT16Q8N8M0 369 aa20.1■□□□□ 0.81
NEK3-208ENST00000618534 SDCCAG3Q96C92 435 aa20.1■□□□□ 0.81
NEK3-208ENST00000618534 AURKBQ96GD4 344 aaPredicted RBP20.1■□□□□ 0.81
NEK3-208ENST00000618534 ST14Q9Y5Y6 855 aa20.1■□□□□ 0.81
NEK3-208ENST00000618534 C2orf81A6NN90 581 aa20.1■□□□□ 0.81
NEK3-208ENST00000618534 NR4A1P22736 598 aa20.1■□□□□ 0.81
NEK3-208ENST00000618534 BCAP31P51572 246 aa20.1■□□□□ 0.81
NEK3-208ENST00000618534 RFTN2Q52LD8 501 aaPredicted RBP20.1■□□□□ 0.81
NEK3-208ENST00000618534 LDLRAP1Q5SW96 308 aa20.1■□□□□ 0.81
NEK3-208ENST00000618534 TTC23Q5W5X9 447 aa20.1■□□□□ 0.81
NEK3-208ENST00000618534 LGI2Q8N0V4 545 aa20.1■□□□□ 0.81
NEK3-208ENST00000618534 OR2T12Q8NG77 320 aa20.1■□□□□ 0.81
NEK3-208ENST00000618534 FUBP3Q96I24 572 aaKnown RBP eCLIP20.1■□□□□ 0.81
NEK3-208ENST00000618534 CINPQ9BW66 212 aaPredicted RBP20.1■□□□□ 0.81
NEK3-208ENST00000618534 RAD21L1Q9H4I0 556 aa20.1■□□□□ 0.81
NEK3-208ENST00000618534 ARMC7Q9H6L4 198 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms