RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 SORCS1Q8WY21 1168 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 BTN2A3PQ96KV6 586 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 ASB16Q96NS5 453 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 TMEM121Q9BTD3 319 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 MKRN2Q9H000 416 aaKnown RBP11.94□□□□□ -0.5
SRRT-216ENST00000618262 TIGARQ9NQ88 270 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 TSR3Q9UJK0 312 aaKnown RBP11.94□□□□□ -0.5
SRRT-216ENST00000618262 C2CD4DB7Z1M9 353 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 F5H5T6 163 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 H0YJX3 145 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 MFSD11O43934 449 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 S100A9P06702 114 aaKnown RBP11.94□□□□□ -0.5
SRRT-216ENST00000618262 ZSCAN5DPP0CG00 497 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 HOXA9P31269 272 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 TRHRP34981 398 aaPredicted RBP11.94□□□□□ -0.5
SRRT-216ENST00000618262 HSD17B3P37058 310 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 MZT2BQ6NZ67 158 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 KDELC2Q7Z4H8 507 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 TDRD5Q8NAT2 981 aaKnown RBP11.94□□□□□ -0.5
SRRT-216ENST00000618262 CMASQ8NFW8 434 aaPredicted RBP11.94□□□□□ -0.5
SRRT-216ENST00000618262 POC1BQ8TC44 478 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 DTX3LQ8TDB6 740 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 TANKQ92844 425 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 RMND5BQ96G75 393 aaPredicted RBP11.94□□□□□ -0.5
SRRT-216ENST00000618262 TBATAQ96M53 351 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 KRT12Q99456 494 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 NARFLQ9H6Q4 476 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 DZANK1Q9NVP4 752 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 NUP50Q9UKX7 468 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 BPTFQ12830 3046 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 HEATR9A2RTY3 570 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 GATCO43716 136 aaKnown RBP11.94□□□□□ -0.5
SRRT-216ENST00000618262 SMIM18P0DKX4 95 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 LAMP2P13473 410 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 SCNN1AP37088 669 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 ECT2LQ008S8 904 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 TRIM25Q14258 630 aaKnown RBP11.94□□□□□ -0.5
SRRT-216ENST00000618262 AAK1Q2M2I8 961 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 OGFOD2Q6N063 350 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 RGS9BPQ6ZS82 235 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 SLC13A5Q86YT5 568 aaPredicted RBP11.94□□□□□ -0.5
SRRT-216ENST00000618262 KATNAL2Q8IYT4 538 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 ACTL9Q8TC94 416 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 RPL10LQ96L21 214 aaKnown RBP11.94□□□□□ -0.5
SRRT-216ENST00000618262 NECAB3Q96P71 396 aaPredicted RBP11.94□□□□□ -0.5
SRRT-216ENST00000618262 RANBP9Q96S59 729 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 BBS2Q9BXC9 721 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 GORASP2Q9H8Y8 452 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 ERVMER34-1Q9H9K5 563 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 EPB41L5Q9HCM4 733 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 DUS2Q9NX74 493 aaKnown RBP11.94□□□□□ -0.5
SRRT-216ENST00000618262 KLHL14Q9P2G3 628 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 BDP1A6H8Y1 2624 aa11.93□□□□□ -0.5
SRRT-216ENST00000618262 ANAPC1Q9H1A4 1944 aa11.93□□□□□ -0.5
SRRT-216ENST00000618262 hCG_1818297A0A087WSY0 165 aa11.93□□□□□ -0.5
SRRT-216ENST00000618262 NDUFS2O75306 463 aa11.93□□□□□ -0.5
SRRT-216ENST00000618262 MYO1DO94832 1006 aa11.93□□□□□ -0.5
SRRT-216ENST00000618262 PRKAR1AP10644 381 aa11.93□□□□□ -0.5
SRRT-216ENST00000618262 ACVRL1P37023 503 aa11.93□□□□□ -0.5
SRRT-216ENST00000618262 EPHA5P54756 1037 aa11.93□□□□□ -0.5
SRRT-216ENST00000618262 SELENBP1Q13228 472 aa11.93□□□□□ -0.5
SRRT-216ENST00000618262 EIF4EBP2Q13542 120 aaPredicted RBP11.93□□□□□ -0.5
SRRT-216ENST00000618262 HNRNPDQ14103 355 aaKnown RBP11.93□□□□□ -0.5
SRRT-216ENST00000618262 TRADDQ15628 312 aa11.93□□□□□ -0.5
SRRT-216ENST00000618262 PTCRAQ6ISU1 281 aaPredicted RBP11.93□□□□□ -0.5
SRRT-216ENST00000618262 MSANTD2Q6P1R3 559 aa11.93□□□□□ -0.5
SRRT-216ENST00000618262 CACUL1Q86Y37 369 aa11.93□□□□□ -0.5
SRRT-216ENST00000618262 EPHX4Q8IUS5 362 aa11.93□□□□□ -0.5
SRRT-216ENST00000618262 GALNT4Q8N4A0 578 aa11.93□□□□□ -0.5
SRRT-216ENST00000618262 GLIS1Q8NBF1 620 aa11.93□□□□□ -0.5
SRRT-216ENST00000618262 OR7D4Q8NG98 312 aa11.93□□□□□ -0.5
SRRT-216ENST00000618262 SMARCD2Q92925 531 aa11.93□□□□□ -0.5
SRRT-216ENST00000618262 RAD51AP1Q96B01 352 aa11.93□□□□□ -0.5
SRRT-216ENST00000618262 SERPINB12Q96P63 405 aa11.93□□□□□ -0.5
SRRT-216ENST00000618262 RNF157Q96PX1 679 aa11.93□□□□□ -0.5
SRRT-216ENST00000618262 MCMBPQ9BTE3 642 aa11.93□□□□□ -0.5
SRRT-216ENST00000618262 ZFP14Q9HCL3 533 aa11.93□□□□□ -0.5
SRRT-216ENST00000618262 SEMA3GQ9NS98 782 aa11.93□□□□□ -0.5
SRRT-216ENST00000618262 RSL24D1Q9UHA3 163 aaKnown RBP11.93□□□□□ -0.5
SRRT-216ENST00000618262 LSM7Q9UK45 103 aaKnown RBP11.93□□□□□ -0.5
SRRT-216ENST00000618262 DNPEPQ9ULA0 475 aa11.93□□□□□ -0.5
SRRT-216ENST00000618262 CDH7Q9ULB5 785 aa11.93□□□□□ -0.5
SRRT-216ENST00000618262 KPNA4O00629 521 aaPredicted RBP11.93□□□□□ -0.5
SRRT-216ENST00000618262 NARSO43776 548 aaKnown RBP11.93□□□□□ -0.5
SRRT-216ENST00000618262 GJB3O75712 270 aa11.93□□□□□ -0.5
SRRT-216ENST00000618262 CDH2P19022 906 aaPredicted RBP11.93□□□□□ -0.5
SRRT-216ENST00000618262 NOS3P29474 1203 aa11.93□□□□□ -0.5
SRRT-216ENST00000618262 ADGRF1Q5T601 910 aa11.93□□□□□ -0.5
SRRT-216ENST00000618262 FAXCQ5TGI0 409 aa11.93□□□□□ -0.5
SRRT-216ENST00000618262 VITQ6UXI7 678 aa11.93□□□□□ -0.5
SRRT-216ENST00000618262 P3H2Q8IVL5 708 aa11.93□□□□□ -0.5
SRRT-216ENST00000618262 RCOR2Q8IZ40 523 aa11.93□□□□□ -0.5
SRRT-216ENST00000618262 PLD5Q8N7P1 536 aa11.93□□□□□ -0.5
SRRT-216ENST00000618262 SLC22A18Q96BI1 424 aa11.93□□□□□ -0.5
SRRT-216ENST00000618262 RIPOR3Q96MK2 946 aa11.93□□□□□ -0.5
SRRT-216ENST00000618262 PRMT1Q99873 361 aaKnown RBP11.93□□□□□ -0.5
SRRT-216ENST00000618262 KLC2Q9H0B6 622 aa11.93□□□□□ -0.5
SRRT-216ENST00000618262 SLC6A17Q9H1V8 727 aa11.93□□□□□ -0.5
SRRT-216ENST00000618262 ERGIC3Q9Y282 383 aa11.93□□□□□ -0.5
SRRT-216ENST00000618262 NCOR1O75376 2440 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms