RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 PHPT1Q9NRX4 125 aaPredicted RBP8.46□□□□□ -1.06
GPC6-202ENST00000617456 ITPR2Q14571 2701 aa8.46□□□□□ -1.06
GPC6-202ENST00000617456 A1L4Q6 167 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 M0QX08 132 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 LSM1O15116 133 aaKnown RBP8.45□□□□□ -1.06
GPC6-202ENST00000617456 SHOX2O60902 331 aaPredicted RBP8.45□□□□□ -1.06
GPC6-202ENST00000617456 STK17BO94768 372 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 PGLSO95336 258 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 TMEM253P0C7T8 217 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 GNLYP22749 145 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 CASP14P31944 242 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 ADCY8P40145 1251 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 ACTR1BP42025 376 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 MAPK9P45984 424 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 CD97P48960 835 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 ACTR1AP61163 376 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 BASP1P80723 227 aaKnown RBP8.45□□□□□ -1.06
GPC6-202ENST00000617456 MC1RQ01726 317 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 SQSTM1Q13501 440 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 DPYSL3Q14195 570 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 KRT81Q14533 505 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 NAA30Q147X3 362 aaPredicted RBP8.45□□□□□ -1.06
GPC6-202ENST00000617456 SLC14A2Q15849 920 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 LONRF1Q17RB8 773 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 ANKRD20A8PQ5CZ79 823 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 FHL5Q5TD97 284 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 KAZNQ674X7 775 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 RAET1GQ6H3X3 334 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 TMEM71Q6P5X7 295 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 CEACAM20Q6UY09 585 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 ARHGAP36Q6ZRI8 547 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 RHOT2Q8IXI1 618 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 BMPERQ8N8U9 685 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 KCTD6Q8NC69 237 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 GDAP1Q8TB36 358 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 NCSTNQ92542 709 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 ZNF75CPQ92670 426 aaPredicted RBP8.45□□□□□ -1.06
GPC6-202ENST00000617456 SDCCAG3Q96C92 435 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 CLIP3Q96DZ5 547 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 DTD2Q96FN9 168 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 TEFMQ96QE5 360 aaKnown RBP8.45□□□□□ -1.06
GPC6-202ENST00000617456 SRPK1Q96SB4 655 aaKnown RBP8.45□□□□□ -1.06
GPC6-202ENST00000617456 TSC22D3Q99576 134 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 SLC38A3Q99624 504 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 DPYSL5Q9BPU6 564 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 FAM167BQ9BTA0 163 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 FRMD8Q9BZ67 464 aaPredicted RBP8.45□□□□□ -1.06
GPC6-202ENST00000617456 APMAPQ9HDC9 416 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 KLC4Q9NSK0 619 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 ETNK2Q9NVF9 386 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 IFNKQ9P0W0 207 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 B4GALT6Q9UBX8 382 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 KLHL3Q9UH77 587 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 INTUQ9ULD6 942 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 SLC17A4Q9Y2C5 497 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 ST14Q9Y5Y6 855 aa8.45□□□□□ -1.06
GPC6-202ENST00000617456 ESPL1Q14674 2120 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 hCG_2014768A0A024R1R8 64 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 A0A0J9YYE9 177 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 TTC24A2A3L6 582 aaPredicted RBP8.44□□□□□ -1.06
GPC6-202ENST00000617456 GPR89AB7ZAQ6 455 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 MKRN2OSH3BPM6 223 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 EBAG9O00559 213 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 NDUFAB1O14561 156 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 VPS4BO75351 444 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 KATNA1O75449 491 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 MAP3K6O95382 1288 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 TRBC1P01850 177 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 GPR89BP0CG08 455 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 RBP3P10745 1247 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 S100A1P23297 94 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 ETV3P41162 512 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 SLC1A1P43005 524 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 TUBB4BP68371 445 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 GPLD1P80108 840 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 CDK3Q00526 305 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 MC2RQ01718 297 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 ABHD18Q0P651 414 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 NFATC2Q13469 925 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 BLMHQ13867 455 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 LRP8Q14114 963 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 ERV3-1Q14264 604 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 SMTNL2Q2TAL5 461 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 CEP85LQ5SZL2 805 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 FBXW10Q5XX13 1052 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 ADAMTSL4Q6UY14 1074 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 ASB18Q6ZVZ8 466 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 MARK2Q7KZI7 788 aaKnown RBP8.44□□□□□ -1.06
GPC6-202ENST00000617456 BZW1Q7L1Q6 419 aaKnown RBP8.44□□□□□ -1.06
GPC6-202ENST00000617456 TECPR1Q7Z6L1 1165 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 PGBD5Q8N414 524 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 LILRB2Q8N423 598 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 TEX9Q8N6V9 391 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 LINC00469Q8N7U9 141 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 OR10G6Q8NH81 332 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 LILRB1Q8NHL6 650 aaPredicted RBP8.44□□□□□ -1.06
GPC6-202ENST00000617456 PDCD6IPQ8WUM4 868 aaKnown RBP8.44□□□□□ -1.06
GPC6-202ENST00000617456 CPLX3Q8WVH0 158 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 PIH1D2Q8WWB5 315 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 HDAC11Q96DB2 347 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms