RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 URB1O60287 2271 aaKnown RBP11.28□□□□□ -0.6
SLIRP-212ENST00000613856 TMEM131Q92545 1883 aa11.27□□□□□ -0.6
SLIRP-212ENST00000613856 TBC1D3DA0A087WVF3 549 aa11.27□□□□□ -0.61
SLIRP-212ENST00000613856 TBC1D3IA0A087WXS9 549 aa11.27□□□□□ -0.61
SLIRP-212ENST00000613856 TBC1D3EA0A087X179 549 aa11.27□□□□□ -0.61
SLIRP-212ENST00000613856 TBC1D3KA0A087X1G2 549 aa11.27□□□□□ -0.61
SLIRP-212ENST00000613856 TMEM120BA0PK00 339 aa11.27□□□□□ -0.61
SLIRP-212ENST00000613856 TBC1D3FA6NER0 549 aaPredicted RBP11.27□□□□□ -0.61
SLIRP-212ENST00000613856 FAM47DPA6NHR8 397 aa11.27□□□□□ -0.61
SLIRP-212ENST00000613856 TBC1D3LB9A6J9 549 aa11.27□□□□□ -0.61
SLIRP-212ENST00000613856 GOLGA8RI6L899 631 aa11.27□□□□□ -0.61
SLIRP-212ENST00000613856 K7ESM1 405 aa11.27□□□□□ -0.61
SLIRP-212ENST00000613856 QSOX1O00391 747 aa11.27□□□□□ -0.61
SLIRP-212ENST00000613856 COPEO14579 308 aa11.27□□□□□ -0.61
SLIRP-212ENST00000613856 TM9SF1O15321 606 aa11.27□□□□□ -0.61
SLIRP-212ENST00000613856 LATO43561 262 aa11.27□□□□□ -0.61
SLIRP-212ENST00000613856 VPS26AO75436 327 aa11.27□□□□□ -0.61
SLIRP-212ENST00000613856 C1QL1O75973 258 aa11.27□□□□□ -0.61
SLIRP-212ENST00000613856 ZWINTO95229 277 aa11.27□□□□□ -0.61
SLIRP-212ENST00000613856 TBC1D3HP0C7X1 549 aa11.27□□□□□ -0.61
SLIRP-212ENST00000613856 CD6P30203 668 aa11.27□□□□□ -0.61
SLIRP-212ENST00000613856 FMO4P31512 558 aa11.27□□□□□ -0.61
SLIRP-212ENST00000613856 AKT1P31749 480 aa11.27□□□□□ -0.61
SLIRP-212ENST00000613856 CRHR1P34998 444 aa11.27□□□□□ -0.61
SLIRP-212ENST00000613856 NUDT1P36639 197 aa11.27□□□□□ -0.61
SLIRP-212ENST00000613856 CCR5P51681 352 aa11.27□□□□□ -0.61
SLIRP-212ENST00000613856 ATXN3P54252 364 aaPredicted RBP11.27□□□□□ -0.61
SLIRP-212ENST00000613856 TIAL1Q01085 375 aaKnown RBP eCLIP11.27□□□□□ -0.61
SLIRP-212ENST00000613856 RPL6Q02878 288 aaKnown RBP11.27□□□□□ -0.61
SLIRP-212ENST00000613856 SGCGQ13326 291 aa11.27□□□□□ -0.61
SLIRP-212ENST00000613856 IRF4Q15306 451 aa11.27□□□□□ -0.61
SLIRP-212ENST00000613856 TRIP6Q15654 476 aaKnown RBP11.27□□□□□ -0.61
SLIRP-212ENST00000613856 TBC1D3GQ6DHY5 549 aa11.27□□□□□ -0.61
SLIRP-212ENST00000613856 TBC1D3CQ6IPX1 549 aa11.27□□□□□ -0.61
SLIRP-212ENST00000613856 PNCKQ6P2M8 343 aa11.27□□□□□ -0.61
SLIRP-212ENST00000613856 FAM124AQ86V42 546 aa11.27□□□□□ -0.61
SLIRP-212ENST00000613856 CEP97Q8IW35 865 aa11.27□□□□□ -0.61
SLIRP-212ENST00000613856 TBC1D3Q8IZP1 549 aaPredicted RBP11.27□□□□□ -0.61
SLIRP-212ENST00000613856 PELI3Q8N2H9 469 aa11.27□□□□□ -0.61
SLIRP-212ENST00000613856 ADAMTS14Q8WXS8 1223 aa11.27□□□□□ -0.61
SLIRP-212ENST00000613856 CCDC97Q96F63 343 aaPredicted RBP11.27□□□□□ -0.61
SLIRP-212ENST00000613856 DCUN1D1Q96GG9 259 aa11.27□□□□□ -0.61
SLIRP-212ENST00000613856 COX14Q96I36 57 aa11.27□□□□□ -0.61
SLIRP-212ENST00000613856 SPACA7Q96KW9 195 aa11.27□□□□□ -0.61
SLIRP-212ENST00000613856 SELENOSQ9BQE4 189 aa11.27□□□□□ -0.61
SLIRP-212ENST00000613856 PCED1AQ9H1Q7 454 aa11.27□□□□□ -0.61
SLIRP-212ENST00000613856 CCDC86Q9H6F5 360 aaKnown RBP11.27□□□□□ -0.61
SLIRP-212ENST00000613856 WSB2Q9NYS7 404 aaPredicted RBP11.27□□□□□ -0.61
SLIRP-212ENST00000613856 KLHL42Q9P2K6 505 aa11.27□□□□□ -0.61
SLIRP-212ENST00000613856 TLK1Q9UKI8 766 aa11.27□□□□□ -0.61
SLIRP-212ENST00000613856 PRSS21Q9Y6M0 314 aa11.27□□□□□ -0.61
SLIRP-212ENST00000613856 GOLGA4Q13439 2230 aaKnown RBP11.26□□□□□ -0.61
SLIRP-212ENST00000613856 IGHV1OR15-9A0A0B4J2B8 117 aa11.26□□□□□ -0.61
SLIRP-212ENST00000613856 PHGDHO43175 533 aaKnown RBP11.26□□□□□ -0.61
SLIRP-212ENST00000613856 VEGFDO43915 354 aa11.26□□□□□ -0.61
SLIRP-212ENST00000613856 NIPSNAP2O75323 286 aa11.26□□□□□ -0.61
SLIRP-212ENST00000613856 SPAG7O75391 227 aa11.26□□□□□ -0.61
SLIRP-212ENST00000613856 SLC25A14O95258 325 aaPredicted RBP11.26□□□□□ -0.61
SLIRP-212ENST00000613856 PCCBP05166 539 aa11.26□□□□□ -0.61
SLIRP-212ENST00000613856 OR56A5P0C7T3 313 aa11.26□□□□□ -0.61
SLIRP-212ENST00000613856 ATP1B2P14415 290 aaPredicted RBP11.26□□□□□ -0.61
SLIRP-212ENST00000613856 ZNF37AP17032 561 aaPredicted RBP11.26□□□□□ -0.61
SLIRP-212ENST00000613856 MSH3P20585 1137 aa11.26□□□□□ -0.61
SLIRP-212ENST00000613856 MAOBP27338 520 aa11.26□□□□□ -0.61
SLIRP-212ENST00000613856 IGFALSP35858 605 aa11.26□□□□□ -0.61
SLIRP-212ENST00000613856 TRIM23P36406 574 aa11.26□□□□□ -0.61
SLIRP-212ENST00000613856 SKIV2L2P42285 1042 aaKnown RBP11.26□□□□□ -0.61
SLIRP-212ENST00000613856 CCT5P48643 541 aa11.26□□□□□ -0.61
SLIRP-212ENST00000613856 DUOXA1Q1HG43 343 aa11.26□□□□□ -0.61
SLIRP-212ENST00000613856 ZNF423Q2M1K9 1284 aa11.26□□□□□ -0.61
SLIRP-212ENST00000613856 TSNAXIP1Q2TAA8 658 aa11.26□□□□□ -0.61
SLIRP-212ENST00000613856 BCL7AQ4VC05 210 aa11.26□□□□□ -0.61
SLIRP-212ENST00000613856 KHDC1Q4VXA5 237 aaKnown RBP11.26□□□□□ -0.61
SLIRP-212ENST00000613856 KIAA0895LQ68EN5 471 aa11.26□□□□□ -0.61
SLIRP-212ENST00000613856 PTRHD1Q6GMV3 140 aaKnown RBP11.26□□□□□ -0.61
SLIRP-212ENST00000613856 UGT3A1Q6NUS8 523 aa11.26□□□□□ -0.61
SLIRP-212ENST00000613856 RAPH1Q70E73 1250 aa11.26□□□□□ -0.61
SLIRP-212ENST00000613856 PIM3Q86V86 326 aa11.26□□□□□ -0.61
SLIRP-212ENST00000613856 PLA2G15Q8NCC3 412 aa11.26□□□□□ -0.61
SLIRP-212ENST00000613856 GDAP1Q8TB36 358 aa11.26□□□□□ -0.61
SLIRP-212ENST00000613856 CD200R1Q8TD46 325 aa11.26□□□□□ -0.61
SLIRP-212ENST00000613856 DENND1AQ8TEH3 1009 aa11.26□□□□□ -0.61
SLIRP-212ENST00000613856 CENPTQ96BT3 561 aa11.26□□□□□ -0.61
SLIRP-212ENST00000613856 TOE1Q96GM8 510 aaKnown RBP11.26□□□□□ -0.61
SLIRP-212ENST00000613856 HIC2Q96JB3 615 aa11.26□□□□□ -0.61
SLIRP-212ENST00000613856 UBXN10Q96LJ8 280 aa11.26□□□□□ -0.61
SLIRP-212ENST00000613856 PANX3Q96QZ0 392 aa11.26□□□□□ -0.61
SLIRP-212ENST00000613856 TSSK1BQ9BXA7 367 aa11.26□□□□□ -0.61
SLIRP-212ENST00000613856 TEX101Q9BY14 249 aa11.26□□□□□ -0.61
SLIRP-212ENST00000613856 IQCGQ9H095 443 aaKnown RBP11.26□□□□□ -0.61
SLIRP-212ENST00000613856 VPS11Q9H270 941 aa11.26□□□□□ -0.61
SLIRP-212ENST00000613856 IL21RQ9HBE5 538 aa11.26□□□□□ -0.61
SLIRP-212ENST00000613856 GPAMQ9HCL2 828 aa11.26□□□□□ -0.61
SLIRP-212ENST00000613856 LATS2Q9NRM7 1088 aa11.26□□□□□ -0.61
SLIRP-212ENST00000613856 NKIRAS1Q9NYS0 192 aa11.26□□□□□ -0.61
SLIRP-212ENST00000613856 DCDC2Q9UHG0 476 aa11.26□□□□□ -0.61
SLIRP-212ENST00000613856 CYP8B1Q9UNU6 501 aa11.26□□□□□ -0.61
SLIRP-212ENST00000613856 ACOT9Q9Y305 439 aa11.26□□□□□ -0.61
SLIRP-212ENST00000613856 LRP4O75096 1905 aa11.25□□□□□ -0.61
SLIRP-212ENST00000613856 GPR89AB7ZAQ6 455 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms