RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 FBN2P35556 2912 aa16.78■□□□□ 0.28
CSNK1E-215ENST00000612795 LRRC53A6NM62 1247 aa16.78■□□□□ 0.28
CSNK1E-215ENST00000612795 C9J4A7 227 aa16.78■□□□□ 0.28
CSNK1E-215ENST00000612795 DDX3YO15523 660 aaKnown RBP16.78■□□□□ 0.28
CSNK1E-215ENST00000612795 KCNJ13O60928 360 aa16.78■□□□□ 0.28
CSNK1E-215ENST00000612795 KRT38O76015 456 aa16.78■□□□□ 0.28
CSNK1E-215ENST00000612795 BPIP17213 487 aa16.78■□□□□ 0.28
CSNK1E-215ENST00000612795 MX2P20592 715 aa16.78■□□□□ 0.28
CSNK1E-215ENST00000612795 CYP2A7P20853 494 aa16.78■□□□□ 0.28
CSNK1E-215ENST00000612795 CDK11BP21127 795 aaKnown RBP16.78■□□□□ 0.28
CSNK1E-215ENST00000612795 OTX2P32243 289 aa16.78■□□□□ 0.28
CSNK1E-215ENST00000612795 ABRQ12979 859 aa16.78■□□□□ 0.28
CSNK1E-215ENST00000612795 NCF4Q15080 339 aa16.78■□□□□ 0.28
CSNK1E-215ENST00000612795 CCDC183Q5T5S1 534 aa16.78■□□□□ 0.28
CSNK1E-215ENST00000612795 ZNF571Q7Z3V5 609 aaPredicted RBP16.78■□□□□ 0.28
CSNK1E-215ENST00000612795 TMC3Q7Z5M5 1100 aa16.78■□□□□ 0.28
CSNK1E-215ENST00000612795 CLEC1AQ8NC01 280 aa16.78■□□□□ 0.28
CSNK1E-215ENST00000612795 UBE2Q2Q8WVN8 375 aa16.78■□□□□ 0.28
CSNK1E-215ENST00000612795 TM9SF4Q92544 642 aa16.78■□□□□ 0.28
CSNK1E-215ENST00000612795 VPS35Q96QK1 796 aa16.78■□□□□ 0.28
CSNK1E-215ENST00000612795 ZCCHC2Q9C0B9 1178 aaKnown RBP16.78■□□□□ 0.28
CSNK1E-215ENST00000612795 ACTR5Q9H9F9 607 aaPredicted RBP16.78■□□□□ 0.28
CSNK1E-215ENST00000612795 MAGEE1Q9HCI5 957 aa16.78■□□□□ 0.28
CSNK1E-215ENST00000612795 AGPAT4Q9NRZ5 378 aa16.78■□□□□ 0.28
CSNK1E-215ENST00000612795 ENTPD4Q9Y227 616 aa16.78■□□□□ 0.28
CSNK1E-215ENST00000612795 BTRCQ9Y297 605 aa16.78■□□□□ 0.28
CSNK1E-215ENST00000612795 CFAP20Q9Y6A4 193 aaKnown RBP16.78■□□□□ 0.28
CSNK1E-215ENST00000612795 POLEQ07864 2286 aa16.78■□□□□ 0.28
CSNK1E-215ENST00000612795 SVILO95425 2214 aa16.78■□□□□ 0.28
CSNK1E-215ENST00000612795 DDX3XO00571 662 aaKnown RBP eCLIP16.77■□□□□ 0.28
CSNK1E-215ENST00000612795 MTHFD1P11586 935 aaKnown RBP16.77■□□□□ 0.28
CSNK1E-215ENST00000612795 PRF1P14222 555 aa16.77■□□□□ 0.28
CSNK1E-215ENST00000612795 PBLDP30039 288 aaPredicted RBP16.77■□□□□ 0.28
CSNK1E-215ENST00000612795 RORAP35398 523 aa16.77■□□□□ 0.28
CSNK1E-215ENST00000612795 GLRBP48167 497 aa16.77■□□□□ 0.28
CSNK1E-215ENST00000612795 ARCN1P48444 511 aaKnown RBP16.77■□□□□ 0.28
CSNK1E-215ENST00000612795 DMPKQ09013 629 aa16.77■□□□□ 0.28
CSNK1E-215ENST00000612795 DPYSL3Q14195 570 aa16.77■□□□□ 0.28
CSNK1E-215ENST00000612795 PCSK7Q16549 785 aa16.77■□□□□ 0.28
CSNK1E-215ENST00000612795 PTCHD3Q3KNS1 767 aa16.77■□□□□ 0.28
CSNK1E-215ENST00000612795 ATP13A5Q4VNC0 1218 aa16.77■□□□□ 0.28
CSNK1E-215ENST00000612795 CARFQ8N187 725 aa16.77■□□□□ 0.28
CSNK1E-215ENST00000612795 NIPA2Q8N8Q9 360 aa16.77■□□□□ 0.28
CSNK1E-215ENST00000612795 BRSK1Q8TDC3 778 aa16.77■□□□□ 0.28
CSNK1E-215ENST00000612795 BTBD6Q96KE9 485 aa16.77■□□□□ 0.28
CSNK1E-215ENST00000612795 ZNF830Q96NB3 372 aaPredicted RBP16.77■□□□□ 0.28
CSNK1E-215ENST00000612795 PCMTD2Q9NV79 361 aa16.77■□□□□ 0.28
CSNK1E-215ENST00000612795 IP6K2Q9UHH9 426 aa16.77■□□□□ 0.28
CSNK1E-215ENST00000612795 ANAPC7Q9UJX3 599 aa16.77■□□□□ 0.28
CSNK1E-215ENST00000612795 F8P00451 2351 aa16.77■□□□□ 0.27
CSNK1E-215ENST00000612795 OR6C74A6NCV1 312 aa16.76■□□□□ 0.27
CSNK1E-215ENST00000612795 TMEM150CB9EJG8 249 aa16.76■□□□□ 0.27
CSNK1E-215ENST00000612795 KCNK1O00180 336 aa16.76■□□□□ 0.27
CSNK1E-215ENST00000612795 KLHL41O60662 606 aa16.76■□□□□ 0.27
CSNK1E-215ENST00000612795 IPO13O94829 963 aaKnown RBP16.76■□□□□ 0.27
CSNK1E-215ENST00000612795 CDH3P22223 829 aa16.76■□□□□ 0.27
CSNK1E-215ENST00000612795 GRNP28799 593 aaKnown RBP16.76■□□□□ 0.27
CSNK1E-215ENST00000612795 HNRNPH3P31942 346 aaKnown RBP16.76■□□□□ 0.27
CSNK1E-215ENST00000612795 KPNA2P52292 529 aaKnown RBP16.76■□□□□ 0.27
CSNK1E-215ENST00000612795 PRKAA1Q13131 559 aa16.76■□□□□ 0.27
CSNK1E-215ENST00000612795 NFE2L1Q14494 772 aa16.76■□□□□ 0.27
CSNK1E-215ENST00000612795 MYBPC3Q14896 1274 aa16.76■□□□□ 0.27
CSNK1E-215ENST00000612795 HADHQ16836 314 aaKnown RBP16.76■□□□□ 0.27
CSNK1E-215ENST00000612795 FBXO38Q6PIJ6 1188 aa16.76■□□□□ 0.27
CSNK1E-215ENST00000612795 MRGPREQ86SM8 312 aa16.76■□□□□ 0.27
CSNK1E-215ENST00000612795 ZADH2Q8N4Q0 377 aa16.76■□□□□ 0.27
CSNK1E-215ENST00000612795 ST6GALNAC3Q8NDV1 305 aa16.76■□□□□ 0.27
CSNK1E-215ENST00000612795 HDAC11Q96DB2 347 aa16.76■□□□□ 0.27
CSNK1E-215ENST00000612795 FER1L6-AS2Q96M78 137 aa16.76■□□□□ 0.27
CSNK1E-215ENST00000612795 IP6K3Q96PC2 410 aa16.76■□□□□ 0.27
CSNK1E-215ENST00000612795 TRIB3Q96RU7 358 aa16.76■□□□□ 0.27
CSNK1E-215ENST00000612795 ZNF670Q9BS34 389 aa16.76■□□□□ 0.27
CSNK1E-215ENST00000612795 UNKQ9C0B0 810 aaKnown RBP16.76■□□□□ 0.27
CSNK1E-215ENST00000612795 BPIFA1Q9NP55 256 aa16.76■□□□□ 0.27
CSNK1E-215ENST00000612795 TMPRSS11EQ9UL52 423 aa16.76■□□□□ 0.27
CSNK1E-215ENST00000612795 OTOGQ6ZRI0 2925 aa16.75■□□□□ 0.27
CSNK1E-215ENST00000612795 POLQO75417 2590 aa16.75■□□□□ 0.27
CSNK1E-215ENST00000612795 ANKRD12Q6UB98 2062 aa16.75■□□□□ 0.27
CSNK1E-215ENST00000612795 LRRTM2O43300 516 aa16.75■□□□□ 0.27
CSNK1E-215ENST00000612795 POP7O75817 140 aaKnown RBP16.75■□□□□ 0.27
CSNK1E-215ENST00000612795 LCA5LO95447 670 aa16.75■□□□□ 0.27
CSNK1E-215ENST00000612795 CAPN1P07384 714 aa16.75■□□□□ 0.27
CSNK1E-215ENST00000612795 MYL5Q02045 173 aa16.75■□□□□ 0.27
CSNK1E-215ENST00000612795 GBE1Q04446 702 aa16.75■□□□□ 0.27
CSNK1E-215ENST00000612795 ADCY2Q08462 1091 aa16.75■□□□□ 0.27
CSNK1E-215ENST00000612795 KLHL30Q0D2K2 578 aa16.75■□□□□ 0.27
CSNK1E-215ENST00000612795 DUS1LQ6P1R4 473 aaKnown RBP16.75■□□□□ 0.27
CSNK1E-215ENST00000612795 IGFL3Q6UXB1 125 aa16.75■□□□□ 0.27
CSNK1E-215ENST00000612795 FAM83HQ6ZRV2 1179 aaPredicted RBP16.75■□□□□ 0.27
CSNK1E-215ENST00000612795 GALNT16Q8N428 558 aa16.75■□□□□ 0.27
CSNK1E-215ENST00000612795 FAM71BQ8TC56 605 aa16.75■□□□□ 0.27
CSNK1E-215ENST00000612795 INPP5DQ92835 1189 aa16.75■□□□□ 0.27
CSNK1E-215ENST00000612795 PPM1MQ96MI6 270 aa16.75■□□□□ 0.27
CSNK1E-215ENST00000612795 RUBCNLQ9H714 662 aa16.75■□□□□ 0.27
CSNK1E-215ENST00000612795 CBX8Q9HC52 389 aa16.75■□□□□ 0.27
CSNK1E-215ENST00000612795 NTNG1Q9Y2I2 539 aa16.75■□□□□ 0.27
CSNK1E-215ENST00000612795 PCDHGA10Q9Y5H3 936 aa16.75■□□□□ 0.27
CSNK1E-215ENST00000612795 APCP25054 2843 aa16.74■□□□□ 0.27
CSNK1E-215ENST00000612795 DOCK10Q96BY6 2186 aa16.74■□□□□ 0.27
CSNK1E-215ENST00000612795 SLC9B1P1A6NJY1 282 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms