RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 SYVN1Q86TM6 617 aa14.51□□□□□ -0.09
CDH1-213ENST00000612417 RBM23Q86U06 439 aaKnown RBP14.51□□□□□ -0.09
CDH1-213ENST00000612417 CAMK1DQ8IU85 385 aa14.51□□□□□ -0.09
CDH1-213ENST00000612417 TMEM125Q96AQ2 219 aa14.51□□□□□ -0.09
CDH1-213ENST00000612417 TCEAL4Q96EI5 215 aa14.51□□□□□ -0.09
CDH1-213ENST00000612417 CERS4Q9HA82 394 aa14.51□□□□□ -0.09
CDH1-213ENST00000612417 ZNF225Q9UK10 706 aa14.51□□□□□ -0.09
CDH1-213ENST00000612417 MYO9BQ13459 2157 aa14.51□□□□□ -0.09
CDH1-213ENST00000612417 ASPDHA6ND91 283 aa14.51□□□□□ -0.09
CDH1-213ENST00000612417 NPEPPSL1A6NEC2 478 aa14.51□□□□□ -0.09
CDH1-213ENST00000612417 ARPC2O15144 300 aa14.51□□□□□ -0.09
CDH1-213ENST00000612417 PFDN6O15212 129 aa14.51□□□□□ -0.09
CDH1-213ENST00000612417 CHEK2O96017 543 aa14.51□□□□□ -0.09
CDH1-213ENST00000612417 SCNN1BP51168 640 aa14.51□□□□□ -0.09
CDH1-213ENST00000612417 ADARP55265 1226 aaKnown RBP14.51□□□□□ -0.09
CDH1-213ENST00000612417 GPM6BQ13491 265 aa14.51□□□□□ -0.09
CDH1-213ENST00000612417 CDH18Q13634 790 aa14.51□□□□□ -0.09
CDH1-213ENST00000612417 TMEM259Q4ZIN3 620 aa14.51□□□□□ -0.09
CDH1-213ENST00000612417 PDCD4Q53EL6 469 aaKnown RBP14.51□□□□□ -0.09
CDH1-213ENST00000612417 ARHGAP15Q53QZ3 475 aa14.51□□□□□ -0.09
CDH1-213ENST00000612417 CXorf57Q6NSI4 855 aaKnown RBP14.51□□□□□ -0.09
CDH1-213ENST00000612417 SPPL2CQ8IUH8 684 aa14.51□□□□□ -0.09
CDH1-213ENST00000612417 BBS7Q8IWZ6 715 aa14.51□□□□□ -0.09
CDH1-213ENST00000612417 ADGRG5Q8IZF4 528 aa14.51□□□□□ -0.09
CDH1-213ENST00000612417 FAM110BQ8TC76 370 aa14.51□□□□□ -0.09
CDH1-213ENST00000612417 RMND5BQ96G75 393 aaPredicted RBP14.51□□□□□ -0.09
CDH1-213ENST00000612417 SCUBE2Q9NQ36 999 aa14.51□□□□□ -0.09
CDH1-213ENST00000612417 ZNF510Q9Y2H8 683 aa14.51□□□□□ -0.09
CDH1-213ENST00000612417 COMMD10Q9Y6G5 202 aa14.51□□□□□ -0.09
CDH1-213ENST00000612417 MYOFQ9NZM1 2061 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 A0A1B0GTW7 788 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 GRXCR2A6NFK2 248 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 H7C0S8 307 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 LEFTY2O00292 366 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 BTN3A1O00481 513 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 DLGAP1O14490 977 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 FGF19O95750 216 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 NPPAP01160 153 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 ASLP04424 464 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 FCGR1AP12314 374 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 CDH2P19022 906 aaPredicted RBP14.5□□□□□ -0.09
CDH1-213ENST00000612417 CHRM3P20309 590 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 FASP25445 335 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 KCNK10P57789 538 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 ERVK-8P63133 956 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 CAPRIN1Q14444 709 aaKnown RBP14.5□□□□□ -0.09
CDH1-213ENST00000612417 CYTH1Q15438 398 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 SHHQ15465 462 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 TEAD2Q15562 447 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 TPGS1Q6ZTW0 290 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 HTR3DQ70Z44 454 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 EPHX4Q8IUS5 362 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 PIANPQ8IYJ0 282 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 OR56A4Q8NGH8 313 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 CD200R1Q8TD46 325 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 KCNJ9Q92806 393 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 CENPNQ96H22 339 aaPredicted RBP14.5□□□□□ -0.09
CDH1-213ENST00000612417 HIC2Q96JB3 615 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 SLC30A3Q99726 388 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 ZIM2Q9NZV7 527 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 DNMT3BQ9UBC3 853 aaKnown RBP14.5□□□□□ -0.09
CDH1-213ENST00000612417 TIMM22Q9Y584 194 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 CEPT1Q9Y6K0 416 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 LAMA3Q16787 3333 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 CROCCQ5TZA2 2017 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 RANBP2P49792 3224 aaKnown RBP14.5□□□□□ -0.09
CDH1-213ENST00000612417 DYTNA2CJ06 578 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 C9JVG2 144 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 XYLBO75191 536 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 RHOP08100 348 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 MZF1P28698 734 aaPredicted RBP14.5□□□□□ -0.09
CDH1-213ENST00000612417 PRDX3P30048 256 aaKnown RBP14.5□□□□□ -0.09
CDH1-213ENST00000612417 AGTR2P50052 363 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 CCT8P50990 548 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 IL2P60568 153 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 YBX1P67809 324 aaKnown RBP14.5□□□□□ -0.09
CDH1-213ENST00000612417 ECT2LQ008S8 904 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 FXNQ16595 210 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 KCTD21Q4G0X4 260 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 CTSL3PQ5NE16 218 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 PSAPL1Q6NUJ1 521 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 RTL10Q7L3V2 364 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 PAPD5Q8NDF8 572 aaKnown RBP14.5□□□□□ -0.09
CDH1-213ENST00000612417 TRPV3Q8NET8 790 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 CCDC97Q96F63 343 aaPredicted RBP14.5□□□□□ -0.09
CDH1-213ENST00000612417 TEX37Q96LM6 180 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 ZNF382Q96SR6 550 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 C9orf16Q9BUW7 83 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 ALG2Q9H553 416 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 CLK4Q9HAZ1 481 aaKnown RBP14.5□□□□□ -0.09
CDH1-213ENST00000612417 GALPQ9UBC7 116 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 EGFL7Q9UHF1 273 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 TRMT6Q9UJA5 497 aaKnown RBP14.5□□□□□ -0.09
CDH1-213ENST00000612417 LEF1Q9UJU2 399 aaPredicted RBP14.5□□□□□ -0.09
CDH1-213ENST00000612417 SLC8A2Q9UPR5 921 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 AURKCQ9UQB9 309 aa14.5□□□□□ -0.09
CDH1-213ENST00000612417 TCRBV5S2A0A599 114 aa14.49□□□□□ -0.09
CDH1-213ENST00000612417 CCDC160A6NGH7 325 aa14.49□□□□□ -0.09
CDH1-213ENST00000612417 TRIM64CA6NLI5 447 aa14.49□□□□□ -0.09
CDH1-213ENST00000612417 ANKRD66B4E2M5 251 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms