RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 MECRQ9BV79 373 aa17.24■□□□□ 0.35
SREK1-216ENST00000612404 PRMT8Q9NR22 394 aaPredicted RBP17.24■□□□□ 0.35
SREK1-216ENST00000612404 KLHL42Q9P2K6 505 aa17.24■□□□□ 0.35
SREK1-216ENST00000612404 PCYT1BQ9Y5K3 369 aaPredicted RBP17.24■□□□□ 0.35
SREK1-216ENST00000612404 HS3ST3A1Q9Y663 406 aa17.24■□□□□ 0.35
SREK1-216ENST00000612404 CHUKO15111 745 aa17.24■□□□□ 0.35
SREK1-216ENST00000612404 POP7O75817 140 aaKnown RBP17.24■□□□□ 0.35
SREK1-216ENST00000612404 RBP1P09455 135 aa17.24■□□□□ 0.35
SREK1-216ENST00000612404 DHRS4L1P0CG22 281 aa17.24■□□□□ 0.35
SREK1-216ENST00000612404 NEFHP12036 1026 aa17.24■□□□□ 0.35
SREK1-216ENST00000612404 THOP1P52888 689 aa17.24■□□□□ 0.35
SREK1-216ENST00000612404 TECRLQ5HYJ1 363 aa17.24■□□□□ 0.35
SREK1-216ENST00000612404 PLEKHS1Q5SXH7 462 aa17.24■□□□□ 0.35
SREK1-216ENST00000612404 ISCA2Q86U28 154 aa17.24■□□□□ 0.35
SREK1-216ENST00000612404 C1orf210Q8IVY1 113 aa17.24■□□□□ 0.35
SREK1-216ENST00000612404 TMEM105Q8N8V8 129 aa17.24■□□□□ 0.35
SREK1-216ENST00000612404 PCED1AQ9H1Q7 454 aa17.24■□□□□ 0.35
SREK1-216ENST00000612404 ABCA7Q8IZY2 2146 aa17.24■□□□□ 0.35
SREK1-216ENST00000612404 EML5Q05BV3 1969 aa17.23■□□□□ 0.35
SREK1-216ENST00000612404 NPEPPSL1A6NEC2 478 aa17.23■□□□□ 0.35
SREK1-216ENST00000612404 A6NNZ2 444 aa17.23■□□□□ 0.35
SREK1-216ENST00000612404 METTL12A8MUP2 240 aa17.23■□□□□ 0.35
SREK1-216ENST00000612404 MEI4A8MW99 385 aa17.23■□□□□ 0.35
SREK1-216ENST00000612404 GPR89AB7ZAQ6 455 aa17.23■□□□□ 0.35
SREK1-216ENST00000612404 GRID2O43424 1007 aa17.23■□□□□ 0.35
SREK1-216ENST00000612404 CEACAM5P06731 702 aa17.23■□□□□ 0.35
SREK1-216ENST00000612404 GPR89BP0CG08 455 aa17.23■□□□□ 0.35
SREK1-216ENST00000612404 CBSLP0DN79 551 aa17.23■□□□□ 0.35
SREK1-216ENST00000612404 CPA3P15088 417 aa17.23■□□□□ 0.35
SREK1-216ENST00000612404 BCKDHBP21953 392 aa17.23■□□□□ 0.35
SREK1-216ENST00000612404 HTR1BP28222 390 aa17.23■□□□□ 0.35
SREK1-216ENST00000612404 HOXA6P31267 233 aa17.23■□□□□ 0.35
SREK1-216ENST00000612404 CBSP35520 551 aa17.23■□□□□ 0.35
SREK1-216ENST00000612404 KIAA1024LP59773 190 aa17.23■□□□□ 0.35
SREK1-216ENST00000612404 PFN3P60673 137 aa17.23■□□□□ 0.35
SREK1-216ENST00000612404 CSTF1Q05048 431 aaKnown RBP17.23■□□□□ 0.35
SREK1-216ENST00000612404 NFATC4Q14934 902 aa17.23■□□□□ 0.35
SREK1-216ENST00000612404 Q6ZSR6 202 aa17.23■□□□□ 0.35
SREK1-216ENST00000612404 TMEM159Q96B96 161 aa17.23■□□□□ 0.35
SREK1-216ENST00000612404 MRPL40Q9NQ50 206 aaKnown RBP17.23■□□□□ 0.35
SREK1-216ENST00000612404 AASDHPPTQ9NRN7 309 aa17.23■□□□□ 0.35
SREK1-216ENST00000612404 SLC17A4Q9Y2C5 497 aa17.23■□□□□ 0.35
SREK1-216ENST00000612404 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.23■□□□□ 0.35
SREK1-216ENST00000612404 CDC7O00311 574 aa17.23■□□□□ 0.35
SREK1-216ENST00000612404 HOXC4P09017 264 aaPredicted RBP17.23■□□□□ 0.35
SREK1-216ENST00000612404 MYL2P10916 166 aa17.23■□□□□ 0.35
SREK1-216ENST00000612404 KCNA4P22459 653 aa17.23■□□□□ 0.35
SREK1-216ENST00000612404 KELP23276 732 aa17.23■□□□□ 0.35
SREK1-216ENST00000612404 PREPP48147 710 aa17.23■□□□□ 0.35
SREK1-216ENST00000612404 GNGT1P63211 74 aa17.23■□□□□ 0.35
SREK1-216ENST00000612404 OR4D1Q15615 310 aa17.23■□□□□ 0.35
SREK1-216ENST00000612404 TSNQ15631 228 aaKnown RBP17.23■□□□□ 0.35
SREK1-216ENST00000612404 ENPP7Q6UWV6 458 aa17.23■□□□□ 0.35
SREK1-216ENST00000612404 VRK3Q8IV63 474 aa17.23■□□□□ 0.35
SREK1-216ENST00000612404 CFAP206Q8IYR0 622 aa17.23■□□□□ 0.35
SREK1-216ENST00000612404 TMEFF1Q8IYR6 380 aa17.23■□□□□ 0.35
SREK1-216ENST00000612404 TMEM151AQ8N4L1 468 aa17.23■□□□□ 0.35
SREK1-216ENST00000612404 LILRA3Q8N6C8 439 aaPredicted RBP17.23■□□□□ 0.35
SREK1-216ENST00000612404 OR56A4Q8NGH8 313 aa17.23■□□□□ 0.35
SREK1-216ENST00000612404 EXT2Q93063 718 aa17.23■□□□□ 0.35
SREK1-216ENST00000612404 PDLIM5Q96HC4 596 aaKnown RBP17.23■□□□□ 0.35
SREK1-216ENST00000612404 HSPA12BQ96MM6 686 aa17.23■□□□□ 0.35
SREK1-216ENST00000612404 TM7SF3Q9NS93 570 aa17.23■□□□□ 0.35
SREK1-216ENST00000612404 COPG2Q9UBF2 871 aa17.23■□□□□ 0.35
SREK1-216ENST00000612404 EIF2B4Q9UI10 523 aaKnown RBP17.23■□□□□ 0.35
SREK1-216ENST00000612404 IKZF3Q9UKT9 509 aa17.23■□□□□ 0.35
SREK1-216ENST00000612404 BPGMP07738 259 aa17.22■□□□□ 0.35
SREK1-216ENST00000612404 SBK3P0C264 359 aa17.22■□□□□ 0.35
SREK1-216ENST00000612404 RABIFP47224 123 aa17.22■□□□□ 0.35
SREK1-216ENST00000612404 YPEL5P62699 121 aa17.22■□□□□ 0.35
SREK1-216ENST00000612404 ABI3BPQ7Z7G0 1075 aa17.22■□□□□ 0.35
SREK1-216ENST00000612404 C11orf96Q7Z7L8 435 aa17.22■□□□□ 0.35
SREK1-216ENST00000612404 AMZ2Q86W34 360 aa17.22■□□□□ 0.35
SREK1-216ENST00000612404 GALNT13Q8IUC8 556 aa17.22■□□□□ 0.35
SREK1-216ENST00000612404 NUDCD3Q8IVD9 361 aa17.22■□□□□ 0.35
SREK1-216ENST00000612404 OR13H1Q8NG92 308 aa17.22■□□□□ 0.35
SREK1-216ENST00000612404 STAG3L4Q8TBR4 150 aa17.22■□□□□ 0.35
SREK1-216ENST00000612404 KIAA1191Q96A73 305 aa17.22■□□□□ 0.35
SREK1-216ENST00000612404 LINC00615Q96LM1 132 aaPredicted RBP17.22■□□□□ 0.35
SREK1-216ENST00000612404 WDR92Q96MX6 357 aa17.22■□□□□ 0.35
SREK1-216ENST00000612404 SLC6A18Q96N87 628 aa17.22■□□□□ 0.35
SREK1-216ENST00000612404 FAM126AQ9BYI3 521 aaPredicted RBP17.22■□□□□ 0.35
SREK1-216ENST00000612404 TFB2MQ9H5Q4 396 aaKnown RBP17.22■□□□□ 0.35
SREK1-216ENST00000612404 CYP4F12Q9HCS2 524 aa17.22■□□□□ 0.35
SREK1-216ENST00000612404 FGF22Q9HCT0 170 aa17.22■□□□□ 0.35
SREK1-216ENST00000612404 MID2Q9UJV3 735 aa17.22■□□□□ 0.35
SREK1-216ENST00000612404 RNF112Q9ULX5 631 aa17.22■□□□□ 0.35
SREK1-216ENST00000612404 SUFUQ9UMX1 484 aa17.22■□□□□ 0.35
SREK1-216ENST00000612404 DNAJC16Q9Y2G8 782 aa17.22■□□□□ 0.35
SREK1-216ENST00000612404 SLCO1B1Q9Y6L6 691 aa17.22■□□□□ 0.35
SREK1-216ENST00000612404 PLXND1Q9Y4D7 1925 aa17.22■□□□□ 0.35
SREK1-216ENST00000612404 CCDC163A0A0D9SF12 145 aa17.21■□□□□ 0.35
SREK1-216ENST00000612404 KMOO15229 486 aa17.21■□□□□ 0.35
SREK1-216ENST00000612404 GPC4O75487 556 aa17.21■□□□□ 0.35
SREK1-216ENST00000612404 FUCA1P04066 466 aa17.21■□□□□ 0.35
SREK1-216ENST00000612404 ENO3P13929 434 aaPredicted RBP17.21■□□□□ 0.35
SREK1-216ENST00000612404 CD27P26842 260 aa17.21■□□□□ 0.35
SREK1-216ENST00000612404 MAOBP27338 520 aa17.21■□□□□ 0.35
SREK1-216ENST00000612404 KCNC1P48547 511 aa17.21■□□□□ 0.35
SREK1-216ENST00000612404 ARHGAP8P85298 464 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms