RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 TLX1P31314 330 aaPredicted RBP7.18□□□□□ -1.26
CSDE1-218ENST00000610726 GGT5P36269 586 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 ARSDP51689 593 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 WDR5P61964 334 aaKnown RBP7.18□□□□□ -1.26
CSDE1-218ENST00000610726 HERVK_113P63132 956 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 GRSF1Q12849 480 aaKnown RBP eCLIP7.18□□□□□ -1.266e-6■■□□□ 12.3
CSDE1-218ENST00000610726 LACTB2Q53H82 288 aaPredicted RBP7.18□□□□□ -1.26
CSDE1-218ENST00000610726 AP1ARQ63HQ0 302 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 TRIM74Q86UV6 250 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 PLD3Q8IV08 490 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 APCDD1Q8J025 514 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 LINC01465Q8N7H1 131 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 HMGB4Q8WW32 186 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 PROX1Q92786 737 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 RAD51AP1Q96B01 352 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 PPCDCQ96CD2 204 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 AIF1LQ9BQI0 150 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 C9orf16Q9BUW7 83 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 FAIM2Q9BWQ8 316 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 ERVK-6Q9BXR3 956 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 EBPLQ9BY08 206 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 ZDHHC2Q9UIJ5 367 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 ITM2BQ9Y287 266 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 UBR3Q6ZT12 1888 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 CDK5RAP2Q96SN8 1893 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 LEFTY1O75610 366 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 VIPP01282 170 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 CTSAP10619 480 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 ACP5P13686 325 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 UBXN2BQ14CS0 331 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 PKDCCQ504Y2 493 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 SNAP47Q5SQN1 464 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 CPTPQ5TA50 214 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 CHSY3Q70JA7 882 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 TMEM135Q86UB9 458 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 AMZ2Q86W34 360 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 TMEM25Q86YD3 366 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 SLC39A11Q8N1S5 342 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 OR2T12Q8NG77 320 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 TOP1MTQ969P6 601 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 SIPA1Q96FS4 1042 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 CADM1Q9BY67 442 aaKnown RBP7.18□□□□□ -1.26
CSDE1-218ENST00000610726 KATNBL1Q9H079 304 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 CCDC177Q9NQR7 707 aaPredicted RBP7.18□□□□□ -1.26
CSDE1-218ENST00000610726 KRT84Q9NSB2 600 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 HCFC1R1Q9NWW0 138 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 CDH22Q9UJ99 828 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 A0A0U1RQS6 177 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 UPK3BL1B0FP48 263 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 UPK3BL2E5RIL1 263 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 IFNA16P05015 189 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 ANXA4P09525 319 aaPredicted RBP7.18□□□□□ -1.26
CSDE1-218ENST00000610726 CD68P34810 354 aaPredicted RBP7.18□□□□□ -1.26
CSDE1-218ENST00000610726 CENPAP49450 140 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 ILF3Q12906 894 aaKnown RBP eCLIP7.18□□□□□ -1.26
CSDE1-218ENST00000610726 LDLRAP1Q5SW96 308 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 SPATA19Q7Z5L4 167 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 LPGAT1Q92604 370 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 NELL1Q92832 810 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 NUS1Q96E22 293 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 PGAP3Q96FM1 320 aaPredicted RBP7.18□□□□□ -1.26
CSDE1-218ENST00000610726 ITCHQ96J02 903 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 HHIPL1Q96JK4 782 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 CLSTN3Q9BQT9 956 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 REEP1Q9H902 201 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 MOCS1Q9NZB8 636 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 MARCH4Q9P2E8 410 aaPredicted RBP7.18□□□□□ -1.26
CSDE1-218ENST00000610726 PRKAB1Q9Y478 270 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 U3KQV3 271 aa7.18□□□□□ -1.26
CSDE1-218ENST00000610726 LRRC72A6NJI9 287 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 K7EPI3 171 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 SEC24AO95486 1093 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 EPCAMP16422 314 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 GNAZP19086 355 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 RPL10P27635 214 aaKnown RBP7.17□□□□□ -1.26
CSDE1-218ENST00000610726 SLC18A1P54219 525 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 MANFP55145 182 aaKnown RBP7.17□□□□□ -1.26
CSDE1-218ENST00000610726 RPS7P62081 194 aaKnown RBP7.17□□□□□ -1.26
CSDE1-218ENST00000610726 TAF8Q7Z7C8 310 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 SPPL2CQ8IUH8 684 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 C2CD4AQ8NCU7 369 aaPredicted RBP7.17□□□□□ -1.26
CSDE1-218ENST00000610726 USP7Q93009 1102 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 RERGQ96A58 199 aaPredicted RBP7.17□□□□□ -1.26
CSDE1-218ENST00000610726 NACC2Q96BF6 587 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 C12orf66Q96MD2 445 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 LINC00597Q9H2U6 94 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 NSUN3Q9H649 340 aaKnown RBP7.17□□□□□ -1.26
CSDE1-218ENST00000610726 OSER1Q9NX31 292 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 ELOVL2Q9NXB9 296 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 FBXL12Q9NXK8 326 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 FAM220BPB1ANY3 271 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 KERAO60938 352 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 TIPRLO75663 272 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 PGLSO95336 258 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 PAPSS2O95340 614 aaPredicted RBP7.17□□□□□ -1.26
CSDE1-218ENST00000610726 BMP10O95393 424 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 C8GP07360 202 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 HSMCR30P0CW71 290 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 NR2F1P10589 423 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 IDH2P48735 452 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms