RNA–Protein interactions for RNA: ENST00000607923.5

CTCFL-213, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,964 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-213ENST00000607923 GALTP07902 379 aa13.57□□□□□ -0.24
CTCFL-213ENST00000607923 HOXB8P17481 243 aaPredicted RBP13.57□□□□□ -0.24
CTCFL-213ENST00000607923 CR2P20023 1033 aa13.57□□□□□ -0.24
CTCFL-213ENST00000607923 NR4A1P22736 598 aa13.57□□□□□ -0.24
CTCFL-213ENST00000607923 VARSP26640 1264 aaKnown RBP13.57□□□□□ -0.24
CTCFL-213ENST00000607923 RFC2P35250 354 aa13.57□□□□□ -0.24
CTCFL-213ENST00000607923 CCL23P55773 120 aa13.57□□□□□ -0.24
CTCFL-213ENST00000607923 GTF2H2Q13888 395 aa13.57□□□□□ -0.24
CTCFL-213ENST00000607923 ATP6AP1Q15904 470 aa13.57□□□□□ -0.24
CTCFL-213ENST00000607923 GTDC1Q4AE62 458 aa13.57□□□□□ -0.24
CTCFL-213ENST00000607923 SPOUT1Q5T280 376 aaKnown RBP13.57□□□□□ -0.24
CTCFL-213ENST00000607923 GTF2H2CQ6P1K8 395 aa13.57□□□□□ -0.24
CTCFL-213ENST00000607923 LRRC8DQ7L1W4 858 aa13.57□□□□□ -0.24
CTCFL-213ENST00000607923 PHACTR4Q8IZ21 702 aa13.57□□□□□ -0.24
CTCFL-213ENST00000607923 KRTCAP2Q8N6L1 136 aa13.57□□□□□ -0.24
CTCFL-213ENST00000607923 FATE1Q969F0 183 aa13.57□□□□□ -0.24
CTCFL-213ENST00000607923 HSPBAP1Q96EW2 488 aa13.57□□□□□ -0.24
CTCFL-213ENST00000607923 TRIM54Q9BYV2 358 aa13.57□□□□□ -0.24
CTCFL-213ENST00000607923 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.57□□□□□ -0.24
CTCFL-213ENST00000607923 ADNPQ9H2P0 1102 aa13.57□□□□□ -0.24
CTCFL-213ENST00000607923 ASB8Q9H765 288 aa13.57□□□□□ -0.24
CTCFL-213ENST00000607923 COL4A4P53420 1690 aaPredicted RBP13.56□□□□□ -0.24
CTCFL-213ENST00000607923 TMEM189-UBE2V1I3L0A0 370 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 GSTA4O15217 222 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 SMAD6O43541 496 aaKnown RBP13.56□□□□□ -0.24
CTCFL-213ENST00000607923 PFDN1O60925 122 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 PRAMEF1O95521 474 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 B3GALT4O96024 378 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 GSNP06396 782 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 MBL2P11226 248 aaPredicted RBP13.56□□□□□ -0.24
CTCFL-213ENST00000607923 PMS2P3Q13401 168 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 FAM26DQ5JW98 314 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 TMEM26Q6ZUK4 368 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 SERPINA9Q86WD7 417 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 DTWD1Q8N5C7 304 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 OR10A6Q8NH74 314 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 SGCDQ92629 289 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 GFM2Q969S9 779 aaKnown RBP13.56□□□□□ -0.24
CTCFL-213ENST00000607923 AURKBQ96GD4 344 aaPredicted RBP13.56□□□□□ -0.24
CTCFL-213ENST00000607923 EXD2Q9NVH0 621 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 SMPD3Q9NY59 655 aaPredicted RBP13.56□□□□□ -0.24
CTCFL-213ENST00000607923 FAF1Q9UNN5 650 aaPredicted RBP13.56□□□□□ -0.24
CTCFL-213ENST00000607923 U3KQV3 271 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 C1orf232A0A0U1RR37 186 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 OR7A17O14581 309 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 PFDN6O15212 129 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 EEDO75530 441 aaKnown RBP13.56□□□□□ -0.24
CTCFL-213ENST00000607923 SLC25A14O95258 325 aaPredicted RBP13.56□□□□□ -0.24
CTCFL-213ENST00000607923 CLDN7O95471 211 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 CD160O95971 181 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 SLC10A3P09131 477 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 CLCN2P51788 898 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 HPCAP84074 193 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 PIGFQ07326 219 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 PHKG1Q16816 387 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 XKR7Q5GH72 579 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 ANKRD46Q86W74 232 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 SLC22A15Q8IZD6 547 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 C12orf43Q96C57 262 aaKnown RBP13.56□□□□□ -0.24
CTCFL-213ENST00000607923 DUS3LQ96G46 650 aaKnown RBP13.56□□□□□ -0.24
CTCFL-213ENST00000607923 CLPBQ9H078 707 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 SMURF2Q9HAU4 748 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 WWOXQ9NZC7 414 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 A0A087WXM4 84 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 TCRBV5S2A0A599 114 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 KLHL33A6NCF5 533 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 UPK3BL1B0FP48 263 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 UPK3BL2E5RIL1 263 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 FFAR2O15552 330 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 VPS4BO75351 444 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 TCF3P15923 654 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 CSKP41240 450 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 TPD52P55327 224 aaPredicted RBP13.56□□□□□ -0.24
CTCFL-213ENST00000607923 SMAD3P84022 425 aaKnown RBP13.56□□□□□ -0.24
CTCFL-213ENST00000607923 IL1RL1Q01638 556 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 ARHGEF7Q14155 803 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 USP41Q3LFD5 358 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 FAM174BQ3ZCQ3 159 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 TMTC4Q5T4D3 741 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 CXorf57Q6NSI4 855 aaKnown RBP13.56□□□□□ -0.24
CTCFL-213ENST00000607923 ENPP6Q6UWR7 440 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 TPGS1Q6ZTW0 290 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 ITFG1Q8TB96 612 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 NCLNQ969V3 563 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 MUS81Q96NY9 551 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 ELOVL2Q9NXB9 296 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 GALNT8Q9NY28 637 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 VAPAQ9P0L0 249 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 LIMD1Q9UGP4 676 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 ZNF711Q9Y462 761 aa13.56□□□□□ -0.24
CTCFL-213ENST00000607923 A0A1B0GVM2 712 aa13.55□□□□□ -0.24
CTCFL-213ENST00000607923 GNGT2O14610 69 aa13.55□□□□□ -0.24
CTCFL-213ENST00000607923 STX16O14662 325 aa13.55□□□□□ -0.24
CTCFL-213ENST00000607923 PRMT5O14744 637 aaPredicted RBP13.55□□□□□ -0.24
CTCFL-213ENST00000607923 F11P03951 625 aa13.55□□□□□ -0.24
CTCFL-213ENST00000607923 PRKACGP22612 351 aa13.55□□□□□ -0.24
CTCFL-213ENST00000607923 PAX3P23760 479 aa13.55□□□□□ -0.24
CTCFL-213ENST00000607923 ALDH3B2P48448 385 aa13.55□□□□□ -0.24
CTCFL-213ENST00000607923 ENTPD1P49961 510 aa13.55□□□□□ -0.24
CTCFL-213ENST00000607923 CDK9P50750 372 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms