RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 PANX3Q96QZ0 392 aa14□□□□□ -0.17
CTSA-219ENST00000607841 ABCG4Q9H172 646 aa14□□□□□ -0.17
CTSA-219ENST00000607841 PPANQ9NQ55 473 aaKnown RBP14□□□□□ -0.17
CTSA-219ENST00000607841 TOR4AQ9NXH8 423 aa14□□□□□ -0.17
CTSA-219ENST00000607841 IL1RAPL1Q9NZN1 696 aa14□□□□□ -0.17
CTSA-219ENST00000607841 LRIT1Q9P2V4 623 aa14□□□□□ -0.17
CTSA-219ENST00000607841 DMGDHQ9UI17 866 aaKnown RBP14□□□□□ -0.17
CTSA-219ENST00000607841 PCDHB1Q9Y5F3 818 aa14□□□□□ -0.17
CTSA-219ENST00000607841 PRSS21Q9Y6M0 314 aa14□□□□□ -0.17
CTSA-219ENST00000607841 U3KQA8 63 aa14□□□□□ -0.17
CTSA-219ENST00000607841 ASCC3Q8N3C0 2202 aaKnown RBP14□□□□□ -0.17
CTSA-219ENST00000607841 ZNF106Q9H2Y7 1883 aaKnown RBP13.99□□□□□ -0.17
CTSA-219ENST00000607841 COL5A1P20908 1838 aaPredicted RBP13.99□□□□□ -0.17
CTSA-219ENST00000607841 CABIN1Q9Y6J0 2220 aa13.99□□□□□ -0.17
CTSA-219ENST00000607841 DCHS1Q96JQ0 3298 aa13.99□□□□□ -0.17
CTSA-219ENST00000607841 TRBV23OR9-2A0A075B6M9 112 aa13.99□□□□□ -0.17
CTSA-219ENST00000607841 A6NCN8 305 aa13.99□□□□□ -0.17
CTSA-219ENST00000607841 LIN7AO14910 233 aaPredicted RBP13.99□□□□□ -0.17
CTSA-219ENST00000607841 DKK1O94907 266 aa13.99□□□□□ -0.17
CTSA-219ENST00000607841 ESR1P03372 595 aa13.99□□□□□ -0.17
CTSA-219ENST00000607841 RPL10P27635 214 aaKnown RBP13.99□□□□□ -0.17
CTSA-219ENST00000607841 FASLGP48023 281 aa13.99□□□□□ -0.17
CTSA-219ENST00000607841 MAZP56270 477 aaKnown RBP13.99□□□□□ -0.17
CTSA-219ENST00000607841 RPA4Q13156 261 aa13.99□□□□□ -0.17
CTSA-219ENST00000607841 SMAD1Q15797 465 aaKnown RBP13.99□□□□□ -0.17
CTSA-219ENST00000607841 N4BP2L1Q5TBK1 243 aaPredicted RBP13.99□□□□□ -0.17
CTSA-219ENST00000607841 ERMP1Q7Z2K6 904 aa13.99□□□□□ -0.17
CTSA-219ENST00000607841 SLCO6A1Q86UG4 719 aa13.99□□□□□ -0.17
CTSA-219ENST00000607841 CCDC25Q86WR0 208 aa13.99□□□□□ -0.17
CTSA-219ENST00000607841 TRIM48Q8IWZ4 208 aa13.99□□□□□ -0.17
CTSA-219ENST00000607841 IFT20Q8IY31 132 aa13.99□□□□□ -0.17
CTSA-219ENST00000607841 PNPLA1Q8N8W4 532 aa13.99□□□□□ -0.17
CTSA-219ENST00000607841 WDR48Q8TAF3 677 aa13.99□□□□□ -0.17
CTSA-219ENST00000607841 GSDMBQ8TAX9 411 aa13.99□□□□□ -0.17
CTSA-219ENST00000607841 SLC37A2Q8TED4 501 aa13.99□□□□□ -0.17
CTSA-219ENST00000607841 NAT14Q8WUY8 206 aa13.99□□□□□ -0.17
CTSA-219ENST00000607841 IFT81Q8WYA0 676 aa13.99□□□□□ -0.17
CTSA-219ENST00000607841 ELMO1Q92556 727 aa13.99□□□□□ -0.17
CTSA-219ENST00000607841 LPGAT1Q92604 370 aa13.99□□□□□ -0.17
CTSA-219ENST00000607841 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.99□□□□□ -0.17
CTSA-219ENST00000607841 P2RY12Q9H244 342 aa13.99□□□□□ -0.17
CTSA-219ENST00000607841 CCDC68Q9H2F9 335 aa13.99□□□□□ -0.17
CTSA-219ENST00000607841 SARS2Q9NP81 518 aaKnown RBP13.99□□□□□ -0.17
CTSA-219ENST00000607841 IARS2Q9NSE4 1012 aaKnown RBP13.99□□□□□ -0.17
CTSA-219ENST00000607841 RNF215Q9Y6U7 377 aa13.99□□□□□ -0.17
CTSA-219ENST00000607841 TP53BP1Q12888 1972 aaPredicted RBP13.99□□□□□ -0.17
CTSA-219ENST00000607841 LRP4O75096 1905 aa13.98□□□□□ -0.17
CTSA-219ENST00000607841 CEP250Q9BV73 2442 aa13.98□□□□□ -0.17
CTSA-219ENST00000607841 BHMG1C9JSJ3 638 aaPredicted RBP13.98□□□□□ -0.17
CTSA-219ENST00000607841 KPNA5O15131 536 aa13.98□□□□□ -0.17
CTSA-219ENST00000607841 EML2O95834 649 aa13.98□□□□□ -0.17
CTSA-219ENST00000607841 S1PR4O95977 384 aa13.98□□□□□ -0.17
CTSA-219ENST00000607841 VIPP01282 170 aa13.98□□□□□ -0.17
CTSA-219ENST00000607841 GSTA2P09210 222 aa13.98□□□□□ -0.17
CTSA-219ENST00000607841 SLC35G4P0C7Q5 338 aa13.98□□□□□ -0.17
CTSA-219ENST00000607841 ERVK-10P10266 1014 aa13.98□□□□□ -0.17
CTSA-219ENST00000607841 XRCC1P18887 633 aaPredicted RBP13.98□□□□□ -0.17
CTSA-219ENST00000607841 FMO4P31512 558 aa13.98□□□□□ -0.17
CTSA-219ENST00000607841 SLC1A2P43004 574 aa13.98□□□□□ -0.17
CTSA-219ENST00000607841 GPR3P46089 330 aa13.98□□□□□ -0.17
CTSA-219ENST00000607841 EIF3BP55884 814 aaKnown RBP13.98□□□□□ -0.17
CTSA-219ENST00000607841 TUBB4BP68371 445 aa13.98□□□□□ -0.17
CTSA-219ENST00000607841 HHEXQ03014 270 aa13.98□□□□□ -0.17
CTSA-219ENST00000607841 CTBP1Q13363 440 aa13.98□□□□□ -0.17
CTSA-219ENST00000607841 CUL1Q13616 776 aa13.98□□□□□ -0.17
CTSA-219ENST00000607841 FASTKD3Q14CZ7 662 aaKnown RBP13.98□□□□□ -0.17
CTSA-219ENST00000607841 SYTL3Q4VX76 610 aa13.98□□□□□ -0.17
CTSA-219ENST00000607841 FAM83HQ6ZRV2 1179 aaPredicted RBP13.98□□□□□ -0.17
CTSA-219ENST00000607841 KIAA0408Q6ZU52 694 aa13.98□□□□□ -0.17
CTSA-219ENST00000607841 DENND6AQ8IWF6 608 aa13.98□□□□□ -0.17
CTSA-219ENST00000607841 SFTPA2Q8IWL1 248 aa13.98□□□□□ -0.17
CTSA-219ENST00000607841 RBM12BQ8IXT5 1001 aaKnown RBP13.98□□□□□ -0.17
CTSA-219ENST00000607841 PATE1Q8WXA2 126 aa13.98□□□□□ -0.17
CTSA-219ENST00000607841 ADAMTS14Q8WXS8 1223 aa13.98□□□□□ -0.17
CTSA-219ENST00000607841 CCDC74AQ96AQ1 378 aa13.98□□□□□ -0.17
CTSA-219ENST00000607841 CXorf40BQ96DE9 158 aa13.98□□□□□ -0.17
CTSA-219ENST00000607841 SLC38A3Q99624 504 aa13.98□□□□□ -0.17
CTSA-219ENST00000607841 CCDC3Q9BQI4 270 aa13.98□□□□□ -0.17
CTSA-219ENST00000607841 WDR83Q9BRX9 315 aaKnown RBP13.98□□□□□ -0.17
CTSA-219ENST00000607841 COG4Q9H9E3 785 aa13.98□□□□□ -0.17
CTSA-219ENST00000607841 ZDHHC18Q9NUE0 388 aa13.98□□□□□ -0.17
CTSA-219ENST00000607841 POT1Q9NUX5 634 aa13.98□□□□□ -0.17
CTSA-219ENST00000607841 CPNE7Q9UBL6 633 aa13.98□□□□□ -0.17
CTSA-219ENST00000607841 FAM8A1Q9UBU6 413 aa13.98□□□□□ -0.17
CTSA-219ENST00000607841 FBXO5Q9UKT4 447 aa13.98□□□□□ -0.17
CTSA-219ENST00000607841 CRYL1Q9Y2S2 319 aa13.98□□□□□ -0.17
CTSA-219ENST00000607841 COMMD10Q9Y6G5 202 aa13.98□□□□□ -0.17
CTSA-219ENST00000607841 IFRD1O00458 451 aaPredicted RBP13.97□□□□□ -0.17
CTSA-219ENST00000607841 BRAFP15056 766 aa13.97□□□□□ -0.17
CTSA-219ENST00000607841 MAGEA4P43358 317 aa13.97□□□□□ -0.17
CTSA-219ENST00000607841 CD151P48509 253 aa13.97□□□□□ -0.17
CTSA-219ENST00000607841 CARSP49589 748 aaKnown RBP13.97□□□□□ -0.17
CTSA-219ENST00000607841 MGAT5Q09328 741 aa13.97□□□□□ -0.17
CTSA-219ENST00000607841 TMED2Q15363 201 aa13.97□□□□□ -0.17
CTSA-219ENST00000607841 DHRS13Q6UX07 377 aa13.97□□□□□ -0.17
CTSA-219ENST00000607841 ZNF438Q7Z4V0 828 aa13.97□□□□□ -0.17
CTSA-219ENST00000607841 CNTN4Q8IWV2 1026 aa13.97□□□□□ -0.17
CTSA-219ENST00000607841 UNC5BQ8IZJ1 945 aa13.97□□□□□ -0.17
CTSA-219ENST00000607841 C2CD4AQ8NCU7 369 aaPredicted RBP13.97□□□□□ -0.17
CTSA-219ENST00000607841 ASZ1Q8WWH4 475 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms