RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 ZNF781Q8N8C0 355 aa17.36■□□□□ 0.37
SHKBP1-224ENST00000600718 ASZ1Q8WWH4 475 aa17.36■□□□□ 0.37
SHKBP1-224ENST00000600718 ELMO1Q92556 727 aa17.36■□□□□ 0.37
SHKBP1-224ENST00000600718 RMDN2Q96LZ7 410 aa17.36■□□□□ 0.37
SHKBP1-224ENST00000600718 C1QTNF2Q9BXJ5 285 aa17.36■□□□□ 0.37
SHKBP1-224ENST00000600718 PREBQ9HCU5 417 aa17.36■□□□□ 0.37
SHKBP1-224ENST00000600718 NUDT4Q9NZJ9 180 aa17.36■□□□□ 0.37
SHKBP1-224ENST00000600718 CD274Q9NZQ7 290 aa17.36■□□□□ 0.37
SHKBP1-224ENST00000600718 ZFR2Q9UPR6 939 aaKnown RBP17.36■□□□□ 0.37
SHKBP1-224ENST00000600718 SNX2O60749 519 aa17.35■□□□□ 0.37
SHKBP1-224ENST00000600718 MPC1LP0DKB6 136 aa17.35■□□□□ 0.37
SHKBP1-224ENST00000600718 TEAD1P28347 426 aa17.35■□□□□ 0.37
SHKBP1-224ENST00000600718 RPL14P50914 215 aaKnown RBP17.35■□□□□ 0.37
SHKBP1-224ENST00000600718 HK3P52790 923 aa17.35■□□□□ 0.37
SHKBP1-224ENST00000600718 CTSCP53634 463 aa17.35■□□□□ 0.37
SHKBP1-224ENST00000600718 ALDH18A1P54886 795 aaKnown RBP17.35■□□□□ 0.37
SHKBP1-224ENST00000600718 ADPRHP54922 357 aa17.35■□□□□ 0.37
SHKBP1-224ENST00000600718 AQP5P55064 265 aa17.35■□□□□ 0.37
SHKBP1-224ENST00000600718 HSPA14Q0VDF9 509 aa17.35■□□□□ 0.37
SHKBP1-224ENST00000600718 SGCGQ13326 291 aa17.35■□□□□ 0.37
SHKBP1-224ENST00000600718 GTF2H3Q13889 308 aa17.35■□□□□ 0.37
SHKBP1-224ENST00000600718 TGFBIQ15582 683 aa17.35■□□□□ 0.37
SHKBP1-224ENST00000600718 MAP7D1Q3KQU3 841 aa17.35■□□□□ 0.37
SHKBP1-224ENST00000600718 BCL7AQ4VC05 210 aa17.35■□□□□ 0.37
SHKBP1-224ENST00000600718 UNC50Q53HI1 259 aa17.35■□□□□ 0.37
SHKBP1-224ENST00000600718 SBSNQ6UWP8 590 aa17.35■□□□□ 0.37
SHKBP1-224ENST00000600718 FRMD7Q6ZUT3 714 aa17.35■□□□□ 0.37
SHKBP1-224ENST00000600718 NEK10Q6ZWH5 1172 aa17.35■□□□□ 0.37
SHKBP1-224ENST00000600718 ZNF514Q96K75 400 aaPredicted RBP17.35■□□□□ 0.37
SHKBP1-224ENST00000600718 ASB2Q96Q27 587 aa17.35■□□□□ 0.37
SHKBP1-224ENST00000600718 KDM4CQ9H3R0 1056 aa17.35■□□□□ 0.37
SHKBP1-224ENST00000600718 GSTO2Q9H4Y5 243 aa17.35■□□□□ 0.37
SHKBP1-224ENST00000600718 STN1Q9H668 368 aaKnown RBP17.35■□□□□ 0.37
SHKBP1-224ENST00000600718 OARD1Q9Y530 152 aa17.35■□□□□ 0.37
SHKBP1-224ENST00000600718 XIRP2A4UGR9 3374 aa17.35■□□□□ 0.37
SHKBP1-224ENST00000600718 SLCO1B7G3V0H7 640 aa17.35■□□□□ 0.37
SHKBP1-224ENST00000600718 RAD51BO15315 384 aa17.35■□□□□ 0.37
SHKBP1-224ENST00000600718 RNGTTO60942 597 aaKnown RBP17.35■□□□□ 0.37
SHKBP1-224ENST00000600718 SUPT7LO94864 414 aa17.35■□□□□ 0.37
SHKBP1-224ENST00000600718 ALOX15P16050 662 aaPredicted RBP17.35■□□□□ 0.37
SHKBP1-224ENST00000600718 CCR10P46092 362 aa17.35■□□□□ 0.37
SHKBP1-224ENST00000600718 SYNPOQ8N3V7 929 aa17.35■□□□□ 0.37
SHKBP1-224ENST00000600718 PLA2G15Q8NCC3 412 aa17.35■□□□□ 0.37
SHKBP1-224ENST00000600718 CCT6BQ92526 530 aa17.35■□□□□ 0.37
SHKBP1-224ENST00000600718 COX14Q96I36 57 aa17.35■□□□□ 0.37
SHKBP1-224ENST00000600718 C1QTNF7Q9BXJ2 289 aa17.35■□□□□ 0.37
SHKBP1-224ENST00000600718 WWP1Q9H0M0 922 aa17.35■□□□□ 0.37
SHKBP1-224ENST00000600718 TSR3Q9UJK0 312 aaKnown RBP17.35■□□□□ 0.37
SHKBP1-224ENST00000600718 CAPN7Q9Y6W3 813 aa17.35■□□□□ 0.37
SHKBP1-224ENST00000600718 GPC4O75487 556 aa17.34■□□□□ 0.37
SHKBP1-224ENST00000600718 S100BP04271 92 aaPredicted RBP17.34■□□□□ 0.37
SHKBP1-224ENST00000600718 PCCBP05166 539 aa17.34■□□□□ 0.37
SHKBP1-224ENST00000600718 GSTM1P09488 218 aa17.34■□□□□ 0.37
SHKBP1-224ENST00000600718 CHRNB1P11230 501 aa17.34■□□□□ 0.37
SHKBP1-224ENST00000600718 GSTM4Q03013 218 aa17.34■□□□□ 0.37
SHKBP1-224ENST00000600718 TFF2Q03403 129 aa17.34■□□□□ 0.37
SHKBP1-224ENST00000600718 BOP1Q14137 746 aaKnown RBP17.34■□□□□ 0.37
SHKBP1-224ENST00000600718 SETDB1Q15047 1291 aa17.34■□□□□ 0.37
SHKBP1-224ENST00000600718 PPP1R3AQ16821 1122 aa17.34■□□□□ 0.37
SHKBP1-224ENST00000600718 LRRK1Q38SD2 2015 aa17.34■□□□□ 0.37
SHKBP1-224ENST00000600718 TMEM259Q4ZIN3 620 aa17.34■□□□□ 0.37
SHKBP1-224ENST00000600718 CCDC121Q6ZUS5 278 aa17.34■□□□□ 0.37
SHKBP1-224ENST00000600718 HORMAD1Q86X24 394 aa17.34■□□□□ 0.37
SHKBP1-224ENST00000600718 ADHFE1Q8IWW8 467 aa17.34■□□□□ 0.37
SHKBP1-224ENST00000600718 KIRREL3Q8IZU9 778 aa17.34■□□□□ 0.37
SHKBP1-224ENST00000600718 BEND7Q8N7W2 519 aaPredicted RBP17.34■□□□□ 0.37
SHKBP1-224ENST00000600718 LENG8Q96PV6 779 aaPredicted RBP17.34■□□□□ 0.37
SHKBP1-224ENST00000600718 TACO1Q9BSH4 297 aaKnown RBP17.34■□□□□ 0.37
SHKBP1-224ENST00000600718 C1QTNF3Q9BXJ4 246 aa17.34■□□□□ 0.37
SHKBP1-224ENST00000600718 OR2AG1Q9H205 316 aa17.34■□□□□ 0.37
SHKBP1-224ENST00000600718 RDH14Q9HBH5 336 aa17.34■□□□□ 0.37
SHKBP1-224ENST00000600718 ATXN10Q9UBB4 475 aa17.34■□□□□ 0.37
SHKBP1-224ENST00000600718 VTI1BQ9UEU0 232 aa17.34■□□□□ 0.37
SHKBP1-224ENST00000600718 ZDHHC2Q9UIJ5 367 aa17.34■□□□□ 0.37
SHKBP1-224ENST00000600718 TBC1D3DA0A087WVF3 549 aa17.33■□□□□ 0.37
SHKBP1-224ENST00000600718 TBC1D3IA0A087WXS9 549 aa17.33■□□□□ 0.37
SHKBP1-224ENST00000600718 TBC1D3EA0A087X179 549 aa17.33■□□□□ 0.37
SHKBP1-224ENST00000600718 TBC1D3KA0A087X1G2 549 aa17.33■□□□□ 0.37
SHKBP1-224ENST00000600718 A0A1W2PQU0 124 aa17.33■□□□□ 0.37
SHKBP1-224ENST00000600718 TBC1D3FA6NER0 549 aaPredicted RBP17.33■□□□□ 0.37
SHKBP1-224ENST00000600718 TBC1D3LB9A6J9 549 aa17.33■□□□□ 0.37
SHKBP1-224ENST00000600718 SLCO2B1O94956 709 aa17.33■□□□□ 0.37
SHKBP1-224ENST00000600718 PAK4O96013 591 aaPredicted RBP17.33■□□□□ 0.37
SHKBP1-224ENST00000600718 TBC1D3HP0C7X1 549 aa17.33■□□□□ 0.37
SHKBP1-224ENST00000600718 NDUFV2P19404 249 aa17.33■□□□□ 0.37
SHKBP1-224ENST00000600718 MPSTP25325 297 aa17.33■□□□□ 0.37
SHKBP1-224ENST00000600718 ANKS6Q68DC2 871 aa17.33■□□□□ 0.37
SHKBP1-224ENST00000600718 TBC1D3GQ6DHY5 549 aa17.33■□□□□ 0.37
SHKBP1-224ENST00000600718 TBC1D3CQ6IPX1 549 aa17.33■□□□□ 0.37
SHKBP1-224ENST00000600718 KIAA1324Q6UXG2 1013 aaKnown RBP17.33■□□□□ 0.37
SHKBP1-224ENST00000600718 TRIM74Q86UV6 250 aa17.33■□□□□ 0.37
SHKBP1-224ENST00000600718 TBC1D3Q8IZP1 549 aaPredicted RBP17.33■□□□□ 0.37
SHKBP1-224ENST00000600718 ASB12Q8WXK4 309 aa17.33■□□□□ 0.37
SHKBP1-224ENST00000600718 LRRC37BQ96QE4 947 aa17.33■□□□□ 0.37
SHKBP1-224ENST00000600718 SLC17A9Q9BYT1 436 aa17.33■□□□□ 0.37
SHKBP1-224ENST00000600718 ABCF3Q9NUQ8 709 aa17.33■□□□□ 0.37
SHKBP1-224ENST00000600718 DNAJC28Q9NX36 388 aa17.33■□□□□ 0.37
SHKBP1-224ENST00000600718 HEY2Q9UBP5 337 aa17.33■□□□□ 0.37
SHKBP1-224ENST00000600718 CA14Q9ULX7 337 aa17.33■□□□□ 0.37
SHKBP1-224ENST00000600718 GPR34Q9UPC5 381 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms