RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 TMEM71Q6P5X7 295 aa8.61□□□□□ -1.03
SSBP4-208ENST00000600628 SLC9B2Q86UD5 537 aa8.61□□□□□ -1.03
SSBP4-208ENST00000600628 PIM3Q86V86 326 aa8.61□□□□□ -1.03
SSBP4-208ENST00000600628 TAB3Q8N5C8 712 aaPredicted RBP8.61□□□□□ -1.03
SSBP4-208ENST00000600628 LILRA3Q8N6C8 439 aaPredicted RBP8.61□□□□□ -1.03
SSBP4-208ENST00000600628 BEND7Q8N7W2 519 aaPredicted RBP8.61□□□□□ -1.03
SSBP4-208ENST00000600628 NAT8LQ8N9F0 302 aa8.61□□□□□ -1.03
SSBP4-208ENST00000600628 SNRNP27Q8WVK2 155 aaKnown RBP8.61□□□□□ -1.03
SSBP4-208ENST00000600628 HDAC10Q969S8 669 aa8.61□□□□□ -1.03
SSBP4-208ENST00000600628 SH3KBP1Q96B97 665 aa8.61□□□□□ -1.03
SSBP4-208ENST00000600628 DCBLD2Q96PD2 775 aa8.61□□□□□ -1.03
SSBP4-208ENST00000600628 COPS8Q99627 209 aa8.61□□□□□ -1.03
SSBP4-208ENST00000600628 AP1M1Q9BXS5 423 aa8.61□□□□□ -1.03
SSBP4-208ENST00000600628 FOXP3Q9BZS1 431 aa8.61□□□□□ -1.03
SSBP4-208ENST00000600628 FAM96AQ9H5X1 160 aa8.61□□□□□ -1.03
SSBP4-208ENST00000600628 RDH14Q9HBH5 336 aa8.61□□□□□ -1.03
SSBP4-208ENST00000600628 CHRAC1Q9NRG0 131 aa8.61□□□□□ -1.03
SSBP4-208ENST00000600628 POT1Q9NUX5 634 aa8.61□□□□□ -1.03
SSBP4-208ENST00000600628 TMEM9Q9P0T7 183 aa8.61□□□□□ -1.03
SSBP4-208ENST00000600628 CRLS1Q9UJA2 301 aa8.61□□□□□ -1.03
SSBP4-208ENST00000600628 LHX6Q9UPM6 363 aa8.61□□□□□ -1.03
SSBP4-208ENST00000600628 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.61□□□□□ -1.03
SSBP4-208ENST00000600628 PRAMEF33A0A0G2JMD5 474 aa8.6□□□□□ -1.03
SSBP4-208ENST00000600628 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.6□□□□□ -1.03
SSBP4-208ENST00000600628 NVLO15381 856 aaKnown RBP8.6□□□□□ -1.03
SSBP4-208ENST00000600628 RRP8O43159 456 aaKnown RBP8.6□□□□□ -1.03
SSBP4-208ENST00000600628 ZW10O43264 779 aa8.6□□□□□ -1.03
SSBP4-208ENST00000600628 GOT2P00505 430 aaKnown RBP8.6□□□□□ -1.03
SSBP4-208ENST00000600628 KRT14P02533 472 aa8.6□□□□□ -1.03
SSBP4-208ENST00000600628 VCLP18206 1134 aa8.6□□□□□ -1.03
SSBP4-208ENST00000600628 MSH3P20585 1137 aa8.6□□□□□ -1.03
SSBP4-208ENST00000600628 RPL10P27635 214 aaKnown RBP8.6□□□□□ -1.03
SSBP4-208ENST00000600628 ACADLP28330 430 aa8.6□□□□□ -1.03
SSBP4-208ENST00000600628 RBMS1P29558 406 aaKnown RBP8.6□□□□□ -1.03
SSBP4-208ENST00000600628 ALDH4A1P30038 563 aa8.6□□□□□ -1.03
SSBP4-208ENST00000600628 NSG1P42857 185 aa8.6□□□□□ -1.03
SSBP4-208ENST00000600628 CD151P48509 253 aa8.6□□□□□ -1.03
SSBP4-208ENST00000600628 CRADDP78560 199 aa8.6□□□□□ -1.03
SSBP4-208ENST00000600628 TMPRSS15P98073 1019 aa8.6□□□□□ -1.03
SSBP4-208ENST00000600628 RPA4Q13156 261 aa8.6□□□□□ -1.03
SSBP4-208ENST00000600628 GTF2H3Q13889 308 aa8.6□□□□□ -1.03
SSBP4-208ENST00000600628 GPR18Q14330 331 aa8.6□□□□□ -1.03
SSBP4-208ENST00000600628 SEMA3AQ14563 771 aa8.6□□□□□ -1.03
SSBP4-208ENST00000600628 RNASEH2BQ5TBB1 312 aaKnown RBP8.6□□□□□ -1.03
SSBP4-208ENST00000600628 NKAIN2Q5VXU1 208 aa8.6□□□□□ -1.03
SSBP4-208ENST00000600628 CERS6Q6ZMG9 384 aa8.6□□□□□ -1.03
SSBP4-208ENST00000600628 LRRC69Q6ZNQ3 347 aa8.6□□□□□ -1.03
SSBP4-208ENST00000600628 TMEM135Q86UB9 458 aa8.6□□□□□ -1.03
SSBP4-208ENST00000600628 CLDN19Q8N6F1 224 aa8.6□□□□□ -1.03
SSBP4-208ENST00000600628 DNAAF3Q8N9W5 541 aa8.6□□□□□ -1.03
SSBP4-208ENST00000600628 GPR150Q8NGU9 434 aa8.6□□□□□ -1.03
SSBP4-208ENST00000600628 OR4L1Q8NH43 312 aa8.6□□□□□ -1.03
SSBP4-208ENST00000600628 GDAP1Q8TB36 358 aa8.6□□□□□ -1.03
SSBP4-208ENST00000600628 HM13Q8TCT9 377 aa8.6□□□□□ -1.03
SSBP4-208ENST00000600628 NAT14Q8WUY8 206 aa8.6□□□□□ -1.03
SSBP4-208ENST00000600628 SIGLEC10Q96LC7 697 aa8.6□□□□□ -1.03
SSBP4-208ENST00000600628 RMDN2Q96LZ7 410 aa8.6□□□□□ -1.03
SSBP4-208ENST00000600628 TTC25Q96NG3 672 aa8.6□□□□□ -1.03
SSBP4-208ENST00000600628 TBC1D10AQ9BXI6 508 aa8.6□□□□□ -1.03
SSBP4-208ENST00000600628 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.6□□□□□ -1.03
SSBP4-208ENST00000600628 STRADBQ9C0K7 418 aa8.6□□□□□ -1.03
SSBP4-208ENST00000600628 P2RY12Q9H244 342 aa8.6□□□□□ -1.03
SSBP4-208ENST00000600628 THSD1Q9NS62 852 aa8.6□□□□□ -1.03
SSBP4-208ENST00000600628 SYBUQ9NX95 663 aa8.6□□□□□ -1.03
SSBP4-208ENST00000600628 SIDT1Q9NXL6 827 aaKnown RBP8.6□□□□□ -1.03
SSBP4-208ENST00000600628 KCNK4Q9NYG8 393 aa8.6□□□□□ -1.03
SSBP4-208ENST00000600628 MARCH4Q9P2E8 410 aaPredicted RBP8.6□□□□□ -1.03
SSBP4-208ENST00000600628 RALYQ9UKM9 306 aaKnown RBP8.6□□□□□ -1.03
SSBP4-208ENST00000600628 SOX13Q9UN79 622 aa8.6□□□□□ -1.03
SSBP4-208ENST00000600628 CDYLQ9Y232 598 aa8.6□□□□□ -1.03
SSBP4-208ENST00000600628 DNAJC16Q9Y2G8 782 aa8.6□□□□□ -1.03
SSBP4-208ENST00000600628 PCDHGA3Q9Y5H0 932 aa8.6□□□□□ -1.03
SSBP4-208ENST00000600628 PRSS21Q9Y6M0 314 aa8.6□□□□□ -1.03
SSBP4-208ENST00000600628 SPTBP11277 2137 aa8.59□□□□□ -1.03
SSBP4-208ENST00000600628 PIEZO2Q9H5I5 2752 aa8.59□□□□□ -1.03
SSBP4-208ENST00000600628 TRBV23OR9-2A0A075B6M9 112 aa8.59□□□□□ -1.03
SSBP4-208ENST00000600628 ZCWPW2A0A1B0GU75 182 aa8.59□□□□□ -1.03
SSBP4-208ENST00000600628 FAM237BA0A1B0GVD1 139 aa8.59□□□□□ -1.03
SSBP4-208ENST00000600628 SLC5A10A0PJK1 596 aa8.59□□□□□ -1.03
SSBP4-208ENST00000600628 B4E171 279 aa8.59□□□□□ -1.03
SSBP4-208ENST00000600628 CFAP99D6REC4 459 aa8.59□□□□□ -1.03
SSBP4-208ENST00000600628 E7EVH7 732 aa8.59□□□□□ -1.03
SSBP4-208ENST00000600628 QSOX1O00391 747 aa8.59□□□□□ -1.03
SSBP4-208ENST00000600628 TOX3O15405 576 aaPredicted RBP8.59□□□□□ -1.03
SSBP4-208ENST00000600628 OR1I1O60431 355 aa8.59□□□□□ -1.03
SSBP4-208ENST00000600628 SNX2O60749 519 aa8.59□□□□□ -1.03
SSBP4-208ENST00000600628 AVILO75366 819 aa8.59□□□□□ -1.03
SSBP4-208ENST00000600628 GPC4O75487 556 aa8.59□□□□□ -1.03
SSBP4-208ENST00000600628 TNFSF15O95150 251 aa8.59□□□□□ -1.03
SSBP4-208ENST00000600628 RALBP11234 206 aa8.59□□□□□ -1.03
SSBP4-208ENST00000600628 FGF3P11487 239 aaPredicted RBP8.59□□□□□ -1.03
SSBP4-208ENST00000600628 MTHFD1P11586 935 aaKnown RBP8.59□□□□□ -1.03
SSBP4-208ENST00000600628 ITPKBP27987 946 aa8.59□□□□□ -1.03
SSBP4-208ENST00000600628 NMBRP28336 390 aa8.59□□□□□ -1.03
SSBP4-208ENST00000600628 AKT1P31749 480 aa8.59□□□□□ -1.03
SSBP4-208ENST00000600628 ETV5P41161 510 aa8.59□□□□□ -1.03
SSBP4-208ENST00000600628 TSPAN7P41732 249 aa8.59□□□□□ -1.03
SSBP4-208ENST00000600628 CAPZBP47756 277 aa8.59□□□□□ -1.03
SSBP4-208ENST00000600628 DRG2P55039 364 aaKnown RBP8.59□□□□□ -1.03
SSBP4-208ENST00000600628 ADARP55265 1226 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms