RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 GPR78Q96P69 363 aa12.57□□□□□ -0.4
ZNF548-210ENST00000600442 HIST1H2AJQ99878 128 aa12.57□□□□□ -0.4
ZNF548-210ENST00000600442 ELAC2Q9BQ52 826 aaKnown RBP12.57□□□□□ -0.4
ZNF548-210ENST00000600442 CCM2Q9BSQ5 444 aa12.57□□□□□ -0.4
ZNF548-210ENST00000600442 H2AFJQ9BTM1 129 aa12.57□□□□□ -0.4
ZNF548-210ENST00000600442 BOCQ9BWV1 1114 aa12.57□□□□□ -0.4
ZNF548-210ENST00000600442 FAM126AQ9BYI3 521 aaPredicted RBP12.57□□□□□ -0.4
ZNF548-210ENST00000600442 CNTNAP3Q9BZ76 1288 aa12.57□□□□□ -0.4
ZNF548-210ENST00000600442 MKRN2Q9H000 416 aaKnown RBP12.57□□□□□ -0.4
ZNF548-210ENST00000600442 BTBD1Q9H0C5 482 aa12.57□□□□□ -0.4
ZNF548-210ENST00000600442 ILKAPQ9H0C8 392 aaPredicted RBP12.57□□□□□ -0.4
ZNF548-210ENST00000600442 C12orf65Q9H3J6 166 aaKnown RBP12.57□□□□□ -0.4
ZNF548-210ENST00000600442 LMAN1LQ9HAT1 526 aa12.57□□□□□ -0.4
ZNF548-210ENST00000600442 NCDNQ9UBB6 729 aa12.57□□□□□ -0.4
ZNF548-210ENST00000600442 TNPO3Q9Y5L0 923 aaKnown RBP12.57□□□□□ -0.4
ZNF548-210ENST00000600442 SUPT3HB4E1H0 165 aa12.56□□□□□ -0.4
ZNF548-210ENST00000600442 G3V2L1 256 aa12.56□□□□□ -0.4
ZNF548-210ENST00000600442 TK2O00142 265 aa12.56□□□□□ -0.4
ZNF548-210ENST00000600442 PLK4O00444 970 aa12.56□□□□□ -0.4
ZNF548-210ENST00000600442 GIPC1O14908 333 aa12.56□□□□□ -0.4
ZNF548-210ENST00000600442 INPP4BO15327 924 aa12.56□□□□□ -0.4
ZNF548-210ENST00000600442 RNGTTO60942 597 aaKnown RBP12.56□□□□□ -0.4
ZNF548-210ENST00000600442 ZNF217O75362 1048 aa12.56□□□□□ -0.4
ZNF548-210ENST00000600442 SUPT3HO75486 399 aa12.56□□□□□ -0.4
ZNF548-210ENST00000600442 C8GP07360 202 aa12.56□□□□□ -0.4
ZNF548-210ENST00000600442 C7P10643 843 aa12.56□□□□□ -0.4
ZNF548-210ENST00000600442 VCLP18206 1134 aa12.56□□□□□ -0.4
ZNF548-210ENST00000600442 CD72P21854 359 aa12.56□□□□□ -0.4
ZNF548-210ENST00000600442 KELP23276 732 aa12.56□□□□□ -0.4
ZNF548-210ENST00000600442 METAP1P53582 386 aa12.56□□□□□ -0.4
ZNF548-210ENST00000600442 ADPRHP54922 357 aa12.56□□□□□ -0.4
ZNF548-210ENST00000600442 ABCE1P61221 599 aaKnown RBP12.56□□□□□ -0.4
ZNF548-210ENST00000600442 PCLAFQ15004 111 aa12.56□□□□□ -0.4
ZNF548-210ENST00000600442 RFLNAQ6ZTI6 216 aa12.56□□□□□ -0.4
ZNF548-210ENST00000600442 NEK10Q6ZWH5 1172 aa12.56□□□□□ -0.4
ZNF548-210ENST00000600442 ISCA2Q86U28 154 aa12.56□□□□□ -0.4
ZNF548-210ENST00000600442 CPNE9Q8IYJ1 553 aa12.56□□□□□ -0.4
ZNF548-210ENST00000600442 SPATA6LQ8N4H0 392 aa12.56□□□□□ -0.4
ZNF548-210ENST00000600442 CCNYL1Q8N7R7 359 aa12.56□□□□□ -0.4
ZNF548-210ENST00000600442 TSTD1Q8NFU3 115 aa12.56□□□□□ -0.4
ZNF548-210ENST00000600442 OR2T34Q8NGX1 318 aa12.56□□□□□ -0.4
ZNF548-210ENST00000600442 EEF1AKMT1Q8WVE0 214 aa12.56□□□□□ -0.4
ZNF548-210ENST00000600442 ANKRD49Q8WVL7 239 aa12.56□□□□□ -0.4
ZNF548-210ENST00000600442 ELMO1Q92556 727 aa12.56□□□□□ -0.4
ZNF548-210ENST00000600442 FAM131CQ96AQ9 280 aa12.56□□□□□ -0.4
ZNF548-210ENST00000600442 TMEM159Q96B96 161 aa12.56□□□□□ -0.4
ZNF548-210ENST00000600442 ERLEC1Q96DZ1 483 aa12.56□□□□□ -0.4
ZNF548-210ENST00000600442 FAR2Q96K12 515 aa12.56□□□□□ -0.4
ZNF548-210ENST00000600442 IER2Q9BTL4 223 aa12.56□□□□□ -0.4
ZNF548-210ENST00000600442 MECRQ9BV79 373 aa12.56□□□□□ -0.4
ZNF548-210ENST00000600442 C1QTNF2Q9BXJ5 285 aa12.56□□□□□ -0.4
ZNF548-210ENST00000600442 SLC17A9Q9BYT1 436 aa12.56□□□□□ -0.4
ZNF548-210ENST00000600442 OSBPL6Q9BZF3 934 aa12.56□□□□□ -0.4
ZNF548-210ENST00000600442 WDR26Q9H7D7 661 aa12.56□□□□□ -0.4
ZNF548-210ENST00000600442 PFDN4Q9NQP4 134 aa12.56□□□□□ -0.4
ZNF548-210ENST00000600442 ZNF358Q9NW07 568 aa12.56□□□□□ -0.4
ZNF548-210ENST00000600442 GPR34Q9UPC5 381 aa12.56□□□□□ -0.4
ZNF548-210ENST00000600442 STK38LQ9Y2H1 464 aa12.56□□□□□ -0.4
ZNF548-210ENST00000600442 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.56□□□□□ -0.4
ZNF548-210ENST00000600442 ARL2BPQ9Y2Y0 163 aa12.56□□□□□ -0.4
ZNF548-210ENST00000600442 CNOT1A5YKK6 2376 aaKnown RBP12.55□□□□□ -0.4
ZNF548-210ENST00000600442 ANKRD36A6QL64 1941 aa12.55□□□□□ -0.4
ZNF548-210ENST00000600442 A0A1W2PQU0 124 aa12.55□□□□□ -0.4
ZNF548-210ENST00000600442 FADS2P1A8MWK0 482 aa12.55□□□□□ -0.4
ZNF548-210ENST00000600442 CACNB4O00305 520 aaPredicted RBP12.55□□□□□ -0.4
ZNF548-210ENST00000600442 TOR1BO14657 336 aa12.55□□□□□ -0.4
ZNF548-210ENST00000600442 SLC16A5O15375 505 aa12.55□□□□□ -0.4
ZNF548-210ENST00000600442 GPR39O43194 453 aa12.55□□□□□ -0.4
ZNF548-210ENST00000600442 SPINT1O43278 529 aa12.55□□□□□ -0.4
ZNF548-210ENST00000600442 NPHS1O60500 1241 aa12.55□□□□□ -0.4
ZNF548-210ENST00000600442 WISP3O95389 354 aaPredicted RBP12.55□□□□□ -0.4
ZNF548-210ENST00000600442 TOP3BO95985 862 aaKnown RBP12.55□□□□□ -0.4
ZNF548-210ENST00000600442 PCCBP05166 539 aa12.55□□□□□ -0.4
ZNF548-210ENST00000600442 ENO2P09104 434 aaPredicted RBP12.55□□□□□ -0.4
ZNF548-210ENST00000600442 MPC1LP0DKB6 136 aa12.55□□□□□ -0.4
ZNF548-210ENST00000600442 CHRNB1P11230 501 aa12.55□□□□□ -0.4
ZNF548-210ENST00000600442 ITGB6P18564 788 aa12.55□□□□□ -0.4
ZNF548-210ENST00000600442 MAP4P27816 1152 aaKnown RBP12.55□□□□□ -0.4
ZNF548-210ENST00000600442 AOAHP28039 575 aa12.55□□□□□ -0.4
ZNF548-210ENST00000600442 NAGLUP54802 743 aa12.55□□□□□ -0.4
ZNF548-210ENST00000600442 NFKB2Q00653 900 aa12.55□□□□□ -0.4
ZNF548-210ENST00000600442 BST1Q10588 318 aa12.55□□□□□ -0.4
ZNF548-210ENST00000600442 SP140Q13342 867 aa12.55□□□□□ -0.4
ZNF548-210ENST00000600442 SETDB1Q15047 1291 aa12.55□□□□□ -0.4
ZNF548-210ENST00000600442 BCL7AQ4VC05 210 aa12.55□□□□□ -0.4
ZNF548-210ENST00000600442 CDKL4Q5MAI5 379 aa12.55□□□□□ -0.4
ZNF548-210ENST00000600442 TTC23LQ6PF05 361 aa12.55□□□□□ -0.4
ZNF548-210ENST00000600442 DET1Q7L5Y6 550 aa12.55□□□□□ -0.4
ZNF548-210ENST00000600442 TRAPPC5Q8IUR0 188 aa12.55□□□□□ -0.4
ZNF548-210ENST00000600442 FBXO39Q8N4B4 442 aa12.55□□□□□ -0.4
ZNF548-210ENST00000600442 DENND6BQ8NEG7 585 aa12.55□□□□□ -0.4
ZNF548-210ENST00000600442 HMGB4Q8WW32 186 aa12.55□□□□□ -0.4
ZNF548-210ENST00000600442 SGF29Q96ES7 293 aa12.55□□□□□ -0.4
ZNF548-210ENST00000600442 RMI1Q9H9A7 625 aa12.55□□□□□ -0.4
ZNF548-210ENST00000600442 LTB4R2Q9NPC1 389 aa12.55□□□□□ -0.4
ZNF548-210ENST00000600442 ITM2CQ9NQX7 267 aa12.55□□□□□ -0.4
ZNF548-210ENST00000600442 NUDT4Q9NZJ9 180 aa12.55□□□□□ -0.4
ZNF548-210ENST00000600442 CD274Q9NZQ7 290 aa12.55□□□□□ -0.4
ZNF548-210ENST00000600442 COQ6Q9Y2Z9 468 aa12.55□□□□□ -0.4
ZNF548-210ENST00000600442 PCDHGA2Q9Y5H1 932 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms