RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 GRID2O43424 1007 aa15.19■□□□□ 0.02
UPF1-206ENST00000598471 PROCP04070 461 aa15.19■□□□□ 0.02
UPF1-206ENST00000598471 CD1DP15813 335 aa15.19■□□□□ 0.02
UPF1-206ENST00000598471 VCLP18206 1134 aa15.19■□□□□ 0.02
UPF1-206ENST00000598471 TFEBP19484 476 aa15.19■□□□□ 0.02
UPF1-206ENST00000598471 PBLDP30039 288 aaPredicted RBP15.19■□□□□ 0.02
UPF1-206ENST00000598471 CCR7P32248 378 aa15.19■□□□□ 0.02
UPF1-206ENST00000598471 GMPRP36959 345 aa15.19■□□□□ 0.02
UPF1-206ENST00000598471 GLRBP48167 497 aa15.19■□□□□ 0.02
UPF1-206ENST00000598471 FNTBP49356 437 aa15.19■□□□□ 0.02
UPF1-206ENST00000598471 CSTF1Q05048 431 aaKnown RBP15.19■□□□□ 0.02
UPF1-206ENST00000598471 HSPA14Q0VDF9 509 aa15.19■□□□□ 0.02
UPF1-206ENST00000598471 DLG1Q12959 904 aa15.19■□□□□ 0.02
UPF1-206ENST00000598471 PTK2BQ14289 1009 aa15.19■□□□□ 0.02
UPF1-206ENST00000598471 C16orf46Q6P387 395 aa15.19■□□□□ 0.02
UPF1-206ENST00000598471 TSSK4Q6SA08 328 aa15.19■□□□□ 0.02
UPF1-206ENST00000598471 CRTC3Q6UUV7 619 aa15.19■□□□□ 0.02
UPF1-206ENST00000598471 ABI3BPQ7Z7G0 1075 aa15.19■□□□□ 0.02
UPF1-206ENST00000598471 GALNT13Q8IUC8 556 aa15.19■□□□□ 0.02
UPF1-206ENST00000598471 SPATA6LQ8N4H0 392 aa15.19■□□□□ 0.02
UPF1-206ENST00000598471 BEND7Q8N7W2 519 aaPredicted RBP15.19■□□□□ 0.02
UPF1-206ENST00000598471 HM13Q8TCT9 377 aa15.19■□□□□ 0.02
UPF1-206ENST00000598471 EEF1AKMT1Q8WVE0 214 aa15.19■□□□□ 0.02
UPF1-206ENST00000598471 GLMNQ92990 594 aa15.19■□□□□ 0.02
UPF1-206ENST00000598471 BMFQ96LC9 184 aa15.19■□□□□ 0.02
UPF1-206ENST00000598471 TFB2MQ9H5Q4 396 aaKnown RBP15.19■□□□□ 0.02
UPF1-206ENST00000598471 MLXIPLQ9NP71 852 aa15.19■□□□□ 0.02
UPF1-206ENST00000598471 AASDHPPTQ9NRN7 309 aa15.19■□□□□ 0.02
UPF1-206ENST00000598471 ZNF358Q9NW07 568 aa15.19■□□□□ 0.02
UPF1-206ENST00000598471 RAPGEFL1Q9UHV5 662 aa15.19■□□□□ 0.02
UPF1-206ENST00000598471 MOSPD1Q9UJG1 213 aa15.19■□□□□ 0.02
UPF1-206ENST00000598471 FBXO4Q9UKT5 387 aa15.19■□□□□ 0.02
UPF1-206ENST00000598471 SLC17A4Q9Y2C5 497 aa15.19■□□□□ 0.02
UPF1-206ENST00000598471 PLXND1Q9Y4D7 1925 aa15.18■□□□□ 0.02
UPF1-206ENST00000598471 MGAT4DA6NG13 374 aa15.18■□□□□ 0.02
UPF1-206ENST00000598471 BTN3A1O00481 513 aa15.18■□□□□ 0.02
UPF1-206ENST00000598471 TNFRSF10CO14798 259 aa15.18■□□□□ 0.02
UPF1-206ENST00000598471 LILRB5O75023 590 aa15.18■□□□□ 0.02
UPF1-206ENST00000598471 POP7O75817 140 aaKnown RBP15.18■□□□□ 0.02
UPF1-206ENST00000598471 MPC1LP0DKB6 136 aa15.18■□□□□ 0.02
UPF1-206ENST00000598471 NEFHP12036 1026 aa15.18■□□□□ 0.02
UPF1-206ENST00000598471 TDGF1P13385 188 aa15.18■□□□□ 0.02
UPF1-206ENST00000598471 TAC1P20366 129 aa15.18■□□□□ 0.02
UPF1-206ENST00000598471 MDH1P40925 334 aaKnown RBP15.18■□□□□ 0.02
UPF1-206ENST00000598471 ETV4P43268 484 aa15.18■□□□□ 0.02
UPF1-206ENST00000598471 MAPK9P45984 424 aa15.18■□□□□ 0.02
UPF1-206ENST00000598471 SERPINB4P48594 390 aa15.18■□□□□ 0.02
UPF1-206ENST00000598471 IRX4P78413 519 aa15.18■□□□□ 0.02
UPF1-206ENST00000598471 PPARDQ03181 441 aa15.18■□□□□ 0.02
UPF1-206ENST00000598471 DMWDQ09019 674 aa15.18■□□□□ 0.02
UPF1-206ENST00000598471 ACSBG2Q5FVE4 666 aa15.18■□□□□ 0.02
UPF1-206ENST00000598471 TECRLQ5HYJ1 363 aa15.18■□□□□ 0.02
UPF1-206ENST00000598471 WDR45BQ5MNZ6 344 aa15.18■□□□□ 0.02
UPF1-206ENST00000598471 Q6ZSR6 202 aa15.18■□□□□ 0.02
UPF1-206ENST00000598471 LPCAT2Q7L5N7 544 aa15.18■□□□□ 0.02
UPF1-206ENST00000598471 ADAMTSL2Q86TH1 951 aa15.18■□□□□ 0.02
UPF1-206ENST00000598471 AMZ2Q86W34 360 aa15.18■□□□□ 0.02
UPF1-206ENST00000598471 TRIM42Q8IWZ5 723 aa15.18■□□□□ 0.02
UPF1-206ENST00000598471 FSTL5Q8N475 847 aaPredicted RBP15.18■□□□□ 0.02
UPF1-206ENST00000598471 OR56A4Q8NGH8 313 aa15.18■□□□□ 0.02
UPF1-206ENST00000598471 OR2L2Q8NH16 312 aa15.18■□□□□ 0.02
UPF1-206ENST00000598471 RHEBL1Q8TAI7 183 aa15.18■□□□□ 0.02
UPF1-206ENST00000598471 STAG3L4Q8TBR4 150 aa15.18■□□□□ 0.02
UPF1-206ENST00000598471 HSPA12BQ96MM6 686 aa15.18■□□□□ 0.02
UPF1-206ENST00000598471 GPR78Q96P69 363 aa15.18■□□□□ 0.02
UPF1-206ENST00000598471 EBF2Q9HAK2 575 aa15.18■□□□□ 0.02
UPF1-206ENST00000598471 XPR1Q9UBH6 696 aa15.18■□□□□ 0.02
UPF1-206ENST00000598471 KLQ9UEF7 1012 aa15.18■□□□□ 0.02
UPF1-206ENST00000598471 ZNHIT2Q9UHR6 403 aa15.18■□□□□ 0.02
UPF1-206ENST00000598471 EMCNQ9ULC0 261 aa15.18■□□□□ 0.02
UPF1-206ENST00000598471 CA5BQ9Y2D0 317 aa15.18■□□□□ 0.02
UPF1-206ENST00000598471 PABPN1LA6NDY0 278 aaKnown RBP15.17■□□□□ 0.02
UPF1-206ENST00000598471 TMEM202A6NGA9 273 aa15.17■□□□□ 0.02
UPF1-206ENST00000598471 SYCE1LA8MT33 242 aa15.17■□□□□ 0.02
UPF1-206ENST00000598471 H0Y8X5 98 aa15.17■□□□□ 0.02
UPF1-206ENST00000598471 BIRC5O15392 142 aa15.17■□□□□ 0.02
UPF1-206ENST00000598471 ZBTB14O43829 449 aa15.17■□□□□ 0.02
UPF1-206ENST00000598471 KCNJ13O60928 360 aa15.17■□□□□ 0.02
UPF1-206ENST00000598471 TSPAN12O95859 305 aa15.17■□□□□ 0.02
UPF1-206ENST00000598471 CEACAM5P06731 702 aa15.17■□□□□ 0.02
UPF1-206ENST00000598471 DHRS4L1P0CG22 281 aa15.17■□□□□ 0.02
UPF1-206ENST00000598471 MYL2P10916 166 aa15.17■□□□□ 0.02
UPF1-206ENST00000598471 CPA3P15088 417 aa15.17■□□□□ 0.02
UPF1-206ENST00000598471 BCKDHBP21953 392 aa15.17■□□□□ 0.02
UPF1-206ENST00000598471 GYS2P54840 703 aa15.17■□□□□ 0.02
UPF1-206ENST00000598471 WDR4P57081 412 aaKnown RBP15.17■□□□□ 0.02
UPF1-206ENST00000598471 ARHGAP8P85298 464 aa15.17■□□□□ 0.02
UPF1-206ENST00000598471 GBX1Q14549 363 aa15.17■□□□□ 0.02
UPF1-206ENST00000598471 PLA2G4EQ3MJ16 856 aa15.17■□□□□ 0.02
UPF1-206ENST00000598471 ENPP7Q6UWV6 458 aa15.17■□□□□ 0.02
UPF1-206ENST00000598471 NEK10Q6ZWH5 1172 aa15.17■□□□□ 0.02
UPF1-206ENST00000598471 DCP2Q8IU60 420 aaKnown RBP15.17■□□□□ 0.02
UPF1-206ENST00000598471 ZNF547Q8IVP9 402 aa15.17■□□□□ 0.02
UPF1-206ENST00000598471 OXR1Q8N573 874 aa15.17■□□□□ 0.02
UPF1-206ENST00000598471 DEFB119Q8N690 84 aa15.17■□□□□ 0.02
UPF1-206ENST00000598471 SKA2Q8WVK7 121 aaPredicted RBP15.17■□□□□ 0.02
UPF1-206ENST00000598471 KIAA1191Q96A73 305 aa15.17■□□□□ 0.02
UPF1-206ENST00000598471 KLHDC7BQ96G42 594 aa15.17■□□□□ 0.02
UPF1-206ENST00000598471 TIMM29Q9BSF4 260 aa15.17■□□□□ 0.02
UPF1-206ENST00000598471 UNKQ9C0B0 810 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms