RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 PLIN3O60664 434 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 TSPAN12O95859 305 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 PROCP04070 461 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 APOA4P06727 396 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 CEACAM5P06731 702 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 CBSLP0DN79 551 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 CBSP35520 551 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 ETV4P43268 484 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 THOP1P52888 689 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 ATP6V0D1P61421 351 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 IRX4P78413 519 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 HSPA14Q0VDF9 509 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 ACAP2Q15057 778 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 PLA2G4EQ3MJ16 856 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 ACSBG2Q5FVE4 666 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 TECRLQ5HYJ1 363 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 HHATQ5VTY9 493 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 ARMC2Q8NEN0 867 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 OR56A4Q8NGH8 313 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 FAM174AQ8TBP5 190 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 EEF1AKMT1Q8WVE0 214 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 ASZ1Q8WWH4 475 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 WDR92Q96MX6 357 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 SLC6A18Q96N87 628 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 PAIP2Q9BPZ3 127 aaKnown RBP14.41□□□□□ -0.1
VRK3-212ENST00000596814 XPR1Q9UBH6 696 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 FAM8A1Q9UBU6 413 aa14.41□□□□□ -0.1
VRK3-212ENST00000596814 TSR3Q9UJK0 312 aaKnown RBP14.41□□□□□ -0.1
VRK3-212ENST00000596814 PCYT1BQ9Y5K3 369 aaPredicted RBP14.41□□□□□ -0.1
VRK3-212ENST00000596814 ABCA7Q8IZY2 2146 aa14.4□□□□□ -0.1
VRK3-212ENST00000596814 TK2O00142 265 aa14.4□□□□□ -0.1
VRK3-212ENST00000596814 KMOO15229 486 aa14.4□□□□□ -0.1
VRK3-212ENST00000596814 ZBTB14O43829 449 aa14.4□□□□□ -0.1
VRK3-212ENST00000596814 ENO3P13929 434 aaPredicted RBP14.4□□□□□ -0.1
VRK3-212ENST00000596814 TFEBP19484 476 aa14.4□□□□□ -0.1
VRK3-212ENST00000596814 WDR4P57081 412 aaKnown RBP14.4□□□□□ -0.1
VRK3-212ENST00000596814 GBX1Q14549 363 aa14.4□□□□□ -0.1
VRK3-212ENST00000596814 ENPP7Q6UWV6 458 aa14.4□□□□□ -0.1
VRK3-212ENST00000596814 Q6ZSR6 202 aa14.4□□□□□ -0.1
VRK3-212ENST00000596814 PIWIL4Q7Z3Z4 852 aaKnown RBP14.4□□□□□ -0.1
VRK3-212ENST00000596814 C11orf96Q7Z7L8 435 aa14.4□□□□□ -0.1
VRK3-212ENST00000596814 GALNT13Q8IUC8 556 aa14.4□□□□□ -0.1
VRK3-212ENST00000596814 MYO1HQ8N1T3 1032 aa14.4□□□□□ -0.1
VRK3-212ENST00000596814 FSTL5Q8N475 847 aaPredicted RBP14.4□□□□□ -0.1
VRK3-212ENST00000596814 OR13H1Q8NG92 308 aa14.4□□□□□ -0.1
VRK3-212ENST00000596814 HM13Q8TCT9 377 aa14.4□□□□□ -0.1
VRK3-212ENST00000596814 DYDC1Q8WWB3 177 aa14.4□□□□□ -0.1
VRK3-212ENST00000596814 PDLIM5Q96HC4 596 aaKnown RBP14.4□□□□□ -0.1
VRK3-212ENST00000596814 MRPL57Q9BQC6 102 aaKnown RBP14.4□□□□□ -0.1
VRK3-212ENST00000596814 DUSP15Q9H1R2 295 aaPredicted RBP14.4□□□□□ -0.1
VRK3-212ENST00000596814 FGF22Q9HCT0 170 aa14.4□□□□□ -0.1
VRK3-212ENST00000596814 AASDHPPTQ9NRN7 309 aa14.4□□□□□ -0.1
VRK3-212ENST00000596814 ZNHIT2Q9UHR6 403 aa14.4□□□□□ -0.1
VRK3-212ENST00000596814 EIF2B4Q9UI10 523 aaKnown RBP14.4□□□□□ -0.1
VRK3-212ENST00000596814 MOSPD1Q9UJG1 213 aa14.4□□□□□ -0.1
VRK3-212ENST00000596814 MID2Q9UJV3 735 aa14.4□□□□□ -0.1
VRK3-212ENST00000596814 FBXO4Q9UKT5 387 aa14.4□□□□□ -0.1
VRK3-212ENST00000596814 PRKAB1Q9Y478 270 aa14.4□□□□□ -0.1
VRK3-212ENST00000596814 THADAQ6YHU6 1953 aa14.4□□□□□ -0.1
VRK3-212ENST00000596814 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.39□□□□□ -0.11
VRK3-212ENST00000596814 PRSS38A1L453 326 aa14.39□□□□□ -0.11
VRK3-212ENST00000596814 POP7O75817 140 aaKnown RBP14.39□□□□□ -0.11
VRK3-212ENST00000596814 RBP1P09455 135 aa14.39□□□□□ -0.11
VRK3-212ENST00000596814 DHRS4L1P0CG22 281 aa14.39□□□□□ -0.11
VRK3-212ENST00000596814 TPRG1LQ5T0D9 272 aa14.39□□□□□ -0.11
VRK3-212ENST00000596814 C11orf74Q86VG3 221 aa14.39□□□□□ -0.11
VRK3-212ENST00000596814 TAX1BP1Q86VP1 789 aa14.39□□□□□ -0.11
VRK3-212ENST00000596814 TMEFF1Q8IYR6 380 aa14.39□□□□□ -0.11
VRK3-212ENST00000596814 OXR1Q8N573 874 aa14.39□□□□□ -0.11
VRK3-212ENST00000596814 OR2L2Q8NH16 312 aa14.39□□□□□ -0.11
VRK3-212ENST00000596814 GLMNQ92990 594 aa14.39□□□□□ -0.11
VRK3-212ENST00000596814 TMEM159Q96B96 161 aa14.39□□□□□ -0.11
VRK3-212ENST00000596814 PTERQ96BW5 349 aa14.39□□□□□ -0.11
VRK3-212ENST00000596814 SCARF2Q96GP6 870 aaPredicted RBP14.39□□□□□ -0.11
VRK3-212ENST00000596814 MRPL46Q9H2W6 279 aaKnown RBP14.39□□□□□ -0.11
VRK3-212ENST00000596814 TFB2MQ9H5Q4 396 aaKnown RBP14.39□□□□□ -0.11
VRK3-212ENST00000596814 ALG9Q9H6U8 611 aa14.39□□□□□ -0.11
VRK3-212ENST00000596814 COG4Q9H9E3 785 aa14.39□□□□□ -0.11
VRK3-212ENST00000596814 MRPL40Q9NQ50 206 aaKnown RBP14.39□□□□□ -0.11
VRK3-212ENST00000596814 SUFUQ9UMX1 484 aa14.39□□□□□ -0.11
VRK3-212ENST00000596814 DNMT3AQ9Y6K1 912 aaPredicted RBP14.39□□□□□ -0.11
VRK3-212ENST00000596814 SLCO1B1Q9Y6L6 691 aa14.39□□□□□ -0.11
VRK3-212ENST00000596814 LRP4O75096 1905 aa14.39□□□□□ -0.11
VRK3-212ENST00000596814 C17orf113A0A1B0GUU1 675 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 SLC5A10A0PJK1 596 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 NPEPPSL1A6NEC2 478 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 MGAT4DA6NG13 374 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 BTN3A1O00481 513 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 LIN7AO14910 233 aaPredicted RBP14.38□□□□□ -0.11
VRK3-212ENST00000596814 GPC4O75487 556 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 THEGLP0DJG4 465 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 MDH1P40925 334 aaKnown RBP14.38□□□□□ -0.11
VRK3-212ENST00000596814 SERPINB4P48594 390 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 ARHGAP8P85298 464 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 IL9RQ01113 521 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 PTK2BQ14289 1009 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 ZNF658BQ4V348 819 aaPredicted RBP14.38□□□□□ -0.11
VRK3-212ENST00000596814 LPCAT2Q7L5N7 544 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 ISCA2Q86U28 154 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 AMZ2Q86W34 360 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms