RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 PCDHGA12O60330 932 aa15.22■□□□□ 0.03
SMCO4-206ENST00000596676 SPAG6O75602 509 aa15.22■□□□□ 0.03
SMCO4-206ENST00000596676 SHBGP04278 402 aa15.22■□□□□ 0.03
SMCO4-206ENST00000596676 BRAFP15056 766 aa15.22■□□□□ 0.03
SMCO4-206ENST00000596676 STX2P32856 288 aa15.22■□□□□ 0.03
SMCO4-206ENST00000596676 CD151P48509 253 aa15.22■□□□□ 0.03
SMCO4-206ENST00000596676 RNF187Q5TA31 235 aaPredicted RBP15.22■□□□□ 0.03
SMCO4-206ENST00000596676 DBX2Q6ZNG2 339 aa15.22■□□□□ 0.03
SMCO4-206ENST00000596676 CYS1Q717R9 158 aa15.22■□□□□ 0.03
SMCO4-206ENST00000596676 PIM3Q86V86 326 aa15.22■□□□□ 0.03
SMCO4-206ENST00000596676 ZC3HC1Q86WB0 502 aaKnown RBP15.22■□□□□ 0.03
SMCO4-206ENST00000596676 GKN2Q86XP6 184 aa15.22■□□□□ 0.03
SMCO4-206ENST00000596676 FSTL5Q8N475 847 aaPredicted RBP15.22■□□□□ 0.03
SMCO4-206ENST00000596676 SPDYE1Q8NFV5 336 aaPredicted RBP15.22■□□□□ 0.03
SMCO4-206ENST00000596676 GIMAP7Q8NHV1 300 aa15.22■□□□□ 0.03
SMCO4-206ENST00000596676 SETD7Q8WTS6 366 aaKnown RBP15.22■□□□□ 0.03
SMCO4-206ENST00000596676 UBLCP1Q8WVY7 318 aaPredicted RBP15.22■□□□□ 0.03
SMCO4-206ENST00000596676 ELMO1Q92556 727 aa15.22■□□□□ 0.03
SMCO4-206ENST00000596676 FAM122AQ96E09 287 aa15.22■□□□□ 0.03
SMCO4-206ENST00000596676 ZNF514Q96K75 400 aaPredicted RBP15.22■□□□□ 0.03
SMCO4-206ENST00000596676 LINC00615Q96LM1 132 aaPredicted RBP15.22■□□□□ 0.03
SMCO4-206ENST00000596676 OLFM1Q99784 485 aa15.22■□□□□ 0.03
SMCO4-206ENST00000596676 FUT8Q9BYC5 575 aa15.22■□□□□ 0.03
SMCO4-206ENST00000596676 GSDMCQ9BYG8 508 aa15.22■□□□□ 0.03
SMCO4-206ENST00000596676 DPEP2Q9H4A9 486 aa15.22■□□□□ 0.03
SMCO4-206ENST00000596676 GNPTGQ9UJJ9 305 aa15.22■□□□□ 0.03
SMCO4-206ENST00000596676 DOLKQ9UPQ8 538 aa15.22■□□□□ 0.03
SMCO4-206ENST00000596676 LY6G6EA0A0G2JKS1 128 aa15.21■□□□□ 0.03
SMCO4-206ENST00000596676 A6NCN8 305 aa15.21■□□□□ 0.03
SMCO4-206ENST00000596676 POC1B-GALNT4F8VUJ3 575 aa15.21■□□□□ 0.03
SMCO4-206ENST00000596676 CASC3O15234 703 aaKnown RBP15.21■□□□□ 0.03
SMCO4-206ENST00000596676 FTH1P02794 183 aa15.21■□□□□ 0.03
SMCO4-206ENST00000596676 ESR1P03372 595 aa15.21■□□□□ 0.03
SMCO4-206ENST00000596676 ZNF883P0CG24 379 aa15.21■□□□□ 0.03
SMCO4-206ENST00000596676 CHRM3P20309 590 aa15.21■□□□□ 0.03
SMCO4-206ENST00000596676 SAT1P21673 171 aa15.21■□□□□ 0.03
SMCO4-206ENST00000596676 GCAP28676 217 aa15.21■□□□□ 0.03
SMCO4-206ENST00000596676 PHBP35232 272 aa15.21■□□□□ 0.03
SMCO4-206ENST00000596676 GMPRP36959 345 aa15.21■□□□□ 0.03
SMCO4-206ENST00000596676 MAZP56270 477 aaKnown RBP15.21■□□□□ 0.03
SMCO4-206ENST00000596676 BOP1Q14137 746 aaKnown RBP15.21■□□□□ 0.03
SMCO4-206ENST00000596676 CLCA4Q14CN2 919 aa15.21■□□□□ 0.03
SMCO4-206ENST00000596676 KIAA0408Q6ZU52 694 aa15.21■□□□□ 0.03
SMCO4-206ENST00000596676 SLC26A11Q86WA9 606 aa15.21■□□□□ 0.03
SMCO4-206ENST00000596676 LRRC6Q86X45 466 aa15.21■□□□□ 0.03
SMCO4-206ENST00000596676 GPATCH11Q8N954 259 aa15.21■□□□□ 0.03
SMCO4-206ENST00000596676 SIDT2Q8NBJ9 832 aaKnown RBP15.21■□□□□ 0.03
SMCO4-206ENST00000596676 ZDHHC1Q8WTX9 485 aa15.21■□□□□ 0.03
SMCO4-206ENST00000596676 ZBTB9Q96C00 473 aa15.21■□□□□ 0.03
SMCO4-206ENST00000596676 WWP1Q9H0M0 922 aa15.21■□□□□ 0.03
SMCO4-206ENST00000596676 ACSS3Q9H6R3 686 aa15.21■□□□□ 0.03
SMCO4-206ENST00000596676 COG4Q9H9E3 785 aa15.21■□□□□ 0.03
SMCO4-206ENST00000596676 CAB39LQ9H9S4 337 aa15.21■□□□□ 0.03
SMCO4-206ENST00000596676 PCDHB1Q9Y5F3 818 aa15.21■□□□□ 0.03
SMCO4-206ENST00000596676 PCDHGB2Q9Y5G2 931 aa15.21■□□□□ 0.03
SMCO4-206ENST00000596676 DNMT3AQ9Y6K1 912 aaPredicted RBP15.21■□□□□ 0.03
SMCO4-206ENST00000596676 CSNK1G3Q9Y6M4 447 aa15.21■□□□□ 0.03
SMCO4-206ENST00000596676 U3KQA8 63 aa15.21■□□□□ 0.03
SMCO4-206ENST00000596676 A0A087WUV0 522 aaPredicted RBP15.2■□□□□ 0.02
SMCO4-206ENST00000596676 SLC5A10A0PJK1 596 aa15.2■□□□□ 0.02
SMCO4-206ENST00000596676 OR52A4PA6NMU1 304 aa15.2■□□□□ 0.02
SMCO4-206ENST00000596676 PDZK1P1A8MUH7 402 aa15.2■□□□□ 0.02
SMCO4-206ENST00000596676 PFDN6O15212 129 aa15.2■□□□□ 0.02
SMCO4-206ENST00000596676 YKT6O15498 198 aa15.2■□□□□ 0.02
SMCO4-206ENST00000596676 NOBOXO60393 691 aa15.2■□□□□ 0.02
SMCO4-206ENST00000596676 AOAHP28039 575 aa15.2■□□□□ 0.02
SMCO4-206ENST00000596676 HSD17B3P37058 310 aa15.2■□□□□ 0.02
SMCO4-206ENST00000596676 PLA2G5P39877 138 aa15.2■□□□□ 0.02
SMCO4-206ENST00000596676 CLCN7P51798 805 aa15.2■□□□□ 0.02
SMCO4-206ENST00000596676 CLCNKAP51800 687 aa15.2■□□□□ 0.02
SMCO4-206ENST00000596676 ADARP55265 1226 aaKnown RBP15.2■□□□□ 0.02
SMCO4-206ENST00000596676 DMPKQ09013 629 aa15.2■□□□□ 0.02
SMCO4-206ENST00000596676 HSPA14Q0VDF9 509 aa15.2■□□□□ 0.02
SMCO4-206ENST00000596676 BMPR2Q13873 1038 aa15.2■□□□□ 0.02
SMCO4-206ENST00000596676 LRP8Q14114 963 aa15.2■□□□□ 0.02
SMCO4-206ENST00000596676 ZNF460Q14592 562 aa15.2■□□□□ 0.02
SMCO4-206ENST00000596676 HECTD2Q5U5R9 776 aa15.2■□□□□ 0.02
SMCO4-206ENST00000596676 METRNLQ641Q3 311 aa15.2■□□□□ 0.02
SMCO4-206ENST00000596676 DUS1LQ6P1R4 473 aaKnown RBP15.2■□□□□ 0.02
SMCO4-206ENST00000596676 ZNF449Q6P9G9 518 aa15.2■□□□□ 0.02
SMCO4-206ENST00000596676 NAXDQ8IW45 347 aa15.2■□□□□ 0.02
SMCO4-206ENST00000596676 SLC35F3Q8IY50 421 aa15.2■□□□□ 0.02
SMCO4-206ENST00000596676 NAGSQ8N159 534 aa15.2■□□□□ 0.02
SMCO4-206ENST00000596676 KYQ8NBH2 561 aa15.2■□□□□ 0.02
SMCO4-206ENST00000596676 OR4C6Q8NH72 309 aa15.2■□□□□ 0.02
SMCO4-206ENST00000596676 OR2W6PQ8NHA6 318 aa15.2■□□□□ 0.02
SMCO4-206ENST00000596676 HM13Q8TCT9 377 aa15.2■□□□□ 0.02
SMCO4-206ENST00000596676 RHBDD1Q8TEB9 315 aa15.2■□□□□ 0.02
SMCO4-206ENST00000596676 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.2■□□□□ 0.02
SMCO4-206ENST00000596676 CDKL2Q92772 493 aa15.2■□□□□ 0.02
SMCO4-206ENST00000596676 ELMO2Q96JJ3 720 aa15.2■□□□□ 0.02
SMCO4-206ENST00000596676 RMDN2Q96LZ7 410 aa15.2■□□□□ 0.02
SMCO4-206ENST00000596676 CYTH2Q99418 400 aa15.2■□□□□ 0.02
SMCO4-206ENST00000596676 GPR21Q99679 349 aa15.2■□□□□ 0.02
SMCO4-206ENST00000596676 NLGN3Q9NZ94 848 aa15.2■□□□□ 0.02
SMCO4-206ENST00000596676 CDYLQ9Y232 598 aa15.2■□□□□ 0.02
SMCO4-206ENST00000596676 CFAP20Q9Y6A4 193 aaKnown RBP15.2■□□□□ 0.02
SMCO4-206ENST00000596676 DMXL1Q9Y485 3027 aa15.2■□□□□ 0.02
SMCO4-206ENST00000596676 GOLGA4Q13439 2230 aaKnown RBP15.19■□□□□ 0.02
SMCO4-206ENST00000596676 HMX2A2RU54 273 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms